RNA–Protein interactions for RNA: ENST00000566549.5

MSLN-207, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-207ENST00000566549 SDF4Q9BRK5 362 aa21.74■■□□□ 1.07
MSLN-207ENST00000566549 TRIM5Q9C035 493 aa21.74■■□□□ 1.07
MSLN-207ENST00000566549 CNTNAP4Q9C0A0 1308 aa21.74■■□□□ 1.07
MSLN-207ENST00000566549 CTAGE5O15320 804 aa21.74■■□□□ 1.07
MSLN-207ENST00000566549 WTAPQ15007 396 aa21.74■■□□□ 1.07
MSLN-207ENST00000566549 TFCP2L1Q9NZI6 479 aa21.74■■□□□ 1.07
MSLN-207ENST00000566549 C4AP0C0L4 1744 aa21.74■■□□□ 1.07
MSLN-207ENST00000566549 C4BP0C0L5 1744 aa21.74■■□□□ 1.07
MSLN-207ENST00000566549 COL5A3P25940 1745 aaPredicted RBP21.73■■□□□ 1.07
MSLN-207ENST00000566549 DOCK2Q92608 1830 aa21.73■■□□□ 1.07
MSLN-207ENST00000566549 CYP2D7A0A087X1C5 515 aa21.73■■□□□ 1.07
MSLN-207ENST00000566549 YEATS4O95619 227 aa21.73■■□□□ 1.07
MSLN-207ENST00000566549 TDRD7Q8NHU6 1098 aaKnown RBP21.73■■□□□ 1.07
MSLN-207ENST00000566549 ZPR1O75312 459 aa21.72■■□□□ 1.07
MSLN-207ENST00000566549 GUCY1A2P33402 732 aa21.72■■□□□ 1.07
MSLN-207ENST00000566549 STX1AQ16623 288 aa21.72■■□□□ 1.07
MSLN-207ENST00000566549 DRC7Q8IY82 874 aa21.72■■□□□ 1.07
MSLN-207ENST00000566549 NUP133Q8WUM0 1156 aa21.72■■□□□ 1.07
MSLN-207ENST00000566549 KCNF1Q9H3M0 494 aa21.72■■□□□ 1.07
MSLN-207ENST00000566549 JAG2Q9Y219 1238 aa21.72■■□□□ 1.07
MSLN-207ENST00000566549 TRIM29Q14134 588 aa21.72■■□□□ 1.07
MSLN-207ENST00000566549 SART3Q15020 963 aaKnown RBP21.72■■□□□ 1.07
MSLN-207ENST00000566549 NARFQ9UHQ1 456 aa21.72■■□□□ 1.07
MSLN-207ENST00000566549 CCNL1Q9UK58 526 aaPredicted RBP21.72■■□□□ 1.07
MSLN-207ENST00000566549 ERICH2A1L162 156 aa21.71■■□□□ 1.07
MSLN-207ENST00000566549 SSRP1Q08945 709 aaKnown RBP21.71■■□□□ 1.07
MSLN-207ENST00000566549 NLRP3Q96P20 1036 aa21.71■■□□□ 1.07
MSLN-207ENST00000566549 BCORQ6W2J9 1755 aa21.71■■□□□ 1.07
MSLN-207ENST00000566549 CICQ96RK0 1608 aaPredicted RBP21.71■■□□□ 1.07
MSLN-207ENST00000566549 A0A1W2PQ27 194 aa21.71■■□□□ 1.07
MSLN-207ENST00000566549 A0A1W2PQ64 194 aa21.71■■□□□ 1.07
MSLN-207ENST00000566549 A0A1W2PQD8 194 aa21.71■■□□□ 1.07
MSLN-207ENST00000566549 NPHP1O15259 732 aa21.71■■□□□ 1.07
MSLN-207ENST00000566549 LAMB2P55268 1798 aa21.71■■□□□ 1.07
MSLN-207ENST00000566549 GOLGA6L19H0YKK7 550 aa21.7■■□□□ 1.06
MSLN-207ENST00000566549 PRDM1O75626 825 aa21.7■■□□□ 1.06
MSLN-207ENST00000566549 WDHD1O75717 1129 aaPredicted RBP21.7■■□□□ 1.06
MSLN-207ENST00000566549 RPS8P62241 208 aaKnown RBP21.7■■□□□ 1.06
MSLN-207ENST00000566549 DNTTIP2Q5QJE6 756 aaKnown RBP21.7■■□□□ 1.06
MSLN-207ENST00000566549 SLC51AQ86UW1 340 aa21.7■■□□□ 1.06
MSLN-207ENST00000566549 ZNF384Q8TF68 577 aa21.7■■□□□ 1.06
MSLN-207ENST00000566549 PIBF1Q8WXW3 757 aa21.7■■□□□ 1.06
MSLN-207ENST00000566549 RIOK1Q9BRS2 568 aaKnown RBP21.7■■□□□ 1.06
MSLN-207ENST00000566549 RPS6KA4O75676 772 aa21.7■■□□□ 1.06
MSLN-207ENST00000566549 PTGS1P23219 599 aa21.7■■□□□ 1.06
MSLN-207ENST00000566549 CHAF1AQ13111 956 aaPredicted RBP21.7■■□□□ 1.06
MSLN-207ENST00000566549 IQCB1Q15051 598 aa21.7■■□□□ 1.06
MSLN-207ENST00000566549 UBAC1Q9BSL1 405 aa21.7■■□□□ 1.06
MSLN-207ENST00000566549 USP21Q9UK80 565 aa21.7■■□□□ 1.06
MSLN-207ENST00000566549 MROH7-TTC4A0A0A0MT08 1334 aa21.69■■□□□ 1.06
MSLN-207ENST00000566549 ZNF75DP51815 510 aa21.69■■□□□ 1.06
MSLN-207ENST00000566549 RTN1Q16799 776 aa21.69■■□□□ 1.06
MSLN-207ENST00000566549 RNF41Q9H4P4 317 aaPredicted RBP21.69■■□□□ 1.06
MSLN-207ENST00000566549 NRBP1Q9UHY1 535 aa21.69■■□□□ 1.06
MSLN-207ENST00000566549 PYCARDQ9ULZ3 195 aa21.69■■□□□ 1.06
MSLN-207ENST00000566549 GOLGA6L6A8MZA4 724 aa21.69■■□□□ 1.06
MSLN-207ENST00000566549 NOLC1Q14978 699 aaKnown RBP eCLIP21.69■■□□□ 1.06
MSLN-207ENST00000566549 AXDND1Q5T1B0 1012 aaPredicted RBP21.69■■□□□ 1.06
MSLN-207ENST00000566549 NYXQ9GZU5 481 aa21.69■■□□□ 1.06
MSLN-207ENST00000566549 KCNJ14Q9UNX9 436 aa21.69■■□□□ 1.06
MSLN-207ENST00000566549 SLC10A5Q5PT55 438 aa21.68■■□□□ 1.06
MSLN-207ENST00000566549 RTCBQ9Y3I0 505 aaKnown RBP21.68■■□□□ 1.06
MSLN-207ENST00000566549 BECN2A8MW95 431 aa21.68■■□□□ 1.06
MSLN-207ENST00000566549 FMNL1O95466 1100 aaPredicted RBP21.68■■□□□ 1.06
MSLN-207ENST00000566549 PFKFB1P16118 471 aa21.68■■□□□ 1.06
MSLN-207ENST00000566549 EVX2Q03828 476 aa21.68■■□□□ 1.06
MSLN-207ENST00000566549 SLC39A14Q15043 492 aa21.68■■□□□ 1.06
MSLN-207ENST00000566549 PLA2G4DQ86XP0 818 aa21.68■■□□□ 1.06
MSLN-207ENST00000566549 ARHGEF1Q92888 912 aaKnown RBP21.68■■□□□ 1.06
MSLN-207ENST00000566549 TNKSO95271 1327 aa21.67■■□□□ 1.06
MSLN-207ENST00000566549 BIN1O00499 593 aa21.67■■□□□ 1.06
MSLN-207ENST00000566549 IFNAR1P17181 557 aa21.67■■□□□ 1.06
MSLN-207ENST00000566549 CCDC186Q7Z3E2 898 aa21.67■■□□□ 1.06
MSLN-207ENST00000566549 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.67■■□□□ 1.06
MSLN-207ENST00000566549 ANO10Q9NW15 660 aa21.67■■□□□ 1.06
MSLN-207ENST00000566549 ZNF202O95125 648 aa21.67■■□□□ 1.06
MSLN-207ENST00000566549 ZNF654Q8IZM8 581 aa21.67■■□□□ 1.06
MSLN-207ENST00000566549 CAVIN2O95810 425 aa21.66■■□□□ 1.06
MSLN-207ENST00000566549 TPTE2Q6XPS3 522 aa21.66■■□□□ 1.06
MSLN-207ENST00000566549 ESR2Q92731 530 aa21.66■■□□□ 1.06
MSLN-207ENST00000566549 CLIC6Q96NY7 704 aa21.66■■□□□ 1.06
MSLN-207ENST00000566549 TIAM2Q8IVF5 1701 aa21.66■■□□□ 1.06
MSLN-207ENST00000566549 BTBD18B2RXH4 712 aa21.66■■□□□ 1.06
MSLN-207ENST00000566549 FBXO33Q7Z6M2 555 aa21.66■■□□□ 1.06
MSLN-207ENST00000566549 TXNRD3Q86VQ6 643 aa21.66■■□□□ 1.06
MSLN-207ENST00000566549 DHX40Q8IX18 779 aaKnown RBP21.66■■□□□ 1.06
MSLN-207ENST00000566549 TRIM22Q8IYM9 498 aa21.66■■□□□ 1.06
MSLN-207ENST00000566549 AOPEPQ8N6M6 819 aa21.66■■□□□ 1.06
MSLN-207ENST00000566549 AATFQ9NY61 560 aaKnown RBP eCLIP21.66■■□□□ 1.06
MSLN-207ENST00000566549 U2AF2P26368 475 aaKnown RBP eCLIP21.65■■□□□ 1.06
MSLN-207ENST00000566549 PRDX5P30044 214 aa21.65■■□□□ 1.06
MSLN-207ENST00000566549 MECOMQ03112 1051 aa21.65■■□□□ 1.06
MSLN-207ENST00000566549 RC3H1Q5TC82 1133 aaKnown RBP21.65■■□□□ 1.06
MSLN-207ENST00000566549 CLIP2Q9UDT6 1046 aa21.65■■□□□ 1.06
MSLN-207ENST00000566549 HIBADHP31937 336 aaKnown RBP21.65■■□□□ 1.06
MSLN-207ENST00000566549 ZRSR1Q15695 479 aaKnown RBP21.65■■□□□ 1.06
MSLN-207ENST00000566549 SLC4A8Q2Y0W8 1093 aa21.65■■□□□ 1.06
MSLN-207ENST00000566549 CEP57L1Q8IYX8 460 aa21.65■■□□□ 1.06
MSLN-207ENST00000566549 FANCBQ8NB91 859 aa21.65■■□□□ 1.06
MSLN-207ENST00000566549 KIAA1468Q9P260 1216 aa21.65■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms