RNA–Protein interactions for RNA: ENST00000566339.5

SPSB3-208, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB3, Length 1,784 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-208ENST00000566339 CFAP100Q494V2 611 aa24.81■■□□□ 1.56
SPSB3-208ENST00000566339 NT5DC1Q5TFE4 455 aa24.81■■□□□ 1.56
SPSB3-208ENST00000566339 MLKLQ8NB16 471 aa24.81■■□□□ 1.56
SPSB3-208ENST00000566339 FBXW7Q969H0 707 aa24.81■■□□□ 1.56
SPSB3-208ENST00000566339 PNMA6AP0CW24 399 aaPredicted RBP24.8■■□□□ 1.56
SPSB3-208ENST00000566339 ADD2P35612 726 aa24.8■■□□□ 1.56
SPSB3-208ENST00000566339 TUBB4BP68371 445 aa24.8■■□□□ 1.56
SPSB3-208ENST00000566339 GJD4Q96KN9 370 aaPredicted RBP24.8■■□□□ 1.56
SPSB3-208ENST00000566339 MTA3Q9BTC8 594 aa24.8■■□□□ 1.56
SPSB3-208ENST00000566339 CCDC9Q9Y3X0 531 aaKnown RBP24.8■■□□□ 1.56
SPSB3-208ENST00000566339 PLCH1Q4KWH8 1693 aa24.8■■□□□ 1.56
SPSB3-208ENST00000566339 LIFRP42702 1097 aa24.8■■□□□ 1.56
SPSB3-208ENST00000566339 HAND2P61296 217 aa24.8■■□□□ 1.56
SPSB3-208ENST00000566339 TCIRG1Q13488 830 aa24.8■■□□□ 1.56
SPSB3-208ENST00000566339 TEX35Q5T0J7 233 aa24.8■■□□□ 1.56
SPSB3-208ENST00000566339 JAKMIP3Q5VZ66 844 aa24.8■■□□□ 1.56
SPSB3-208ENST00000566339 KANK3Q6NY19 840 aa24.8■■□□□ 1.56
SPSB3-208ENST00000566339 EP400Q96L91 3159 aa24.79■■□□□ 1.56
SPSB3-208ENST00000566339 GNL2Q13823 731 aaKnown RBP24.79■■□□□ 1.56
SPSB3-208ENST00000566339 GPR161Q8N6U8 529 aaKnown RBP24.79■■□□□ 1.56
SPSB3-208ENST00000566339 ZNF579Q8NAF0 562 aaKnown RBP24.79■■□□□ 1.56
SPSB3-208ENST00000566339 ZCRB1Q8TBF4 217 aaKnown RBP24.79■■□□□ 1.56
SPSB3-208ENST00000566339 ENOX1Q8TC92 643 aaKnown RBP24.79■■□□□ 1.56
SPSB3-208ENST00000566339 ZNF594Q96JF6 807 aaPredicted RBP24.79■■□□□ 1.56
SPSB3-208ENST00000566339 PUS3Q9BZE2 481 aaKnown RBP24.79■■□□□ 1.56
SPSB3-208ENST00000566339 PUS7LQ9H0K6 701 aaKnown RBP24.79■■□□□ 1.56
SPSB3-208ENST00000566339 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.78■■□□□ 1.56
SPSB3-208ENST00000566339 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP24.78■■□□□ 1.56
SPSB3-208ENST00000566339 ATP1A3P13637 1013 aa24.78■■□□□ 1.56
SPSB3-208ENST00000566339 ZAP70P43403 619 aa24.78■■□□□ 1.56
SPSB3-208ENST00000566339 APOA5Q6Q788 366 aa24.78■■□□□ 1.56
SPSB3-208ENST00000566339 TMEM139Q8IV31 216 aa24.78■■□□□ 1.56
SPSB3-208ENST00000566339 KRI1Q8N9T8 703 aaKnown RBP24.78■■□□□ 1.56
SPSB3-208ENST00000566339 CNNM3Q8NE01 707 aa24.78■■□□□ 1.56
SPSB3-208ENST00000566339 GNL3Q9BVP2 549 aaKnown RBP eCLIP24.78■■□□□ 1.56
SPSB3-208ENST00000566339 KCNH3Q9ULD8 1083 aa24.78■■□□□ 1.56
SPSB3-208ENST00000566339 PARP3Q9Y6F1 533 aa24.78■■□□□ 1.56
SPSB3-208ENST00000566339 CDHR2Q9BYE9 1310 aa24.78■■□□□ 1.56
SPSB3-208ENST00000566339 IARSP41252 1262 aaKnown RBP24.77■■□□□ 1.56
SPSB3-208ENST00000566339 RCAN1P53805 252 aa24.77■■□□□ 1.56
SPSB3-208ENST00000566339 TUBB2AQ13885 445 aa24.77■■□□□ 1.56
SPSB3-208ENST00000566339 TUBB2BQ9BVA1 445 aa24.77■■□□□ 1.56
SPSB3-208ENST00000566339 BTG4Q9NY30 223 aa24.77■■□□□ 1.56
SPSB3-208ENST00000566339 PPP2R2CQ9Y2T4 447 aa24.77■■□□□ 1.56
SPSB3-208ENST00000566339 ZBTB43O43298 467 aa24.77■■□□□ 1.56
SPSB3-208ENST00000566339 MARCKSP29966 332 aaPredicted RBP24.77■■□□□ 1.56
SPSB3-208ENST00000566339 CYP2C19P33261 490 aa24.77■■□□□ 1.56
SPSB3-208ENST00000566339 MAP3K9P80192 1104 aa24.77■■□□□ 1.56
SPSB3-208ENST00000566339 METTL16Q86W50 562 aaKnown RBP24.77■■□□□ 1.56
SPSB3-208ENST00000566339 UBXN6Q9BZV1 441 aa24.77■■□□□ 1.56
SPSB3-208ENST00000566339 MDM2Q00987 491 aaPredicted RBP24.76■■□□□ 1.55
SPSB3-208ENST00000566339 NTRK3Q16288 839 aa24.76■■□□□ 1.55
SPSB3-208ENST00000566339 CCDC34Q96HJ3 373 aa24.76■■□□□ 1.55
SPSB3-208ENST00000566339 BAG1Q99933 345 aaPredicted RBP24.76■■□□□ 1.55
SPSB3-208ENST00000566339 PRDM11Q9NQV5 511 aa24.76■■□□□ 1.55
SPSB3-208ENST00000566339 TBC1D2BQ9UPU7 963 aa24.76■■□□□ 1.55
SPSB3-208ENST00000566339 VWA3AA6NCI4 1184 aa24.75■■□□□ 1.55
SPSB3-208ENST00000566339 ZNF18P17022 549 aa24.75■■□□□ 1.55
SPSB3-208ENST00000566339 ADORA1P30542 326 aa24.75■■□□□ 1.55
SPSB3-208ENST00000566339 CASQ1P31415 396 aa24.75■■□□□ 1.55
SPSB3-208ENST00000566339 IFIT5Q13325 482 aaKnown RBP24.75■■□□□ 1.55
SPSB3-208ENST00000566339 DPF2Q92785 391 aa24.75■■□□□ 1.55
SPSB3-208ENST00000566339 UTP14AQ9BVJ6 771 aaKnown RBP24.75■■□□□ 1.55
SPSB3-208ENST00000566339 IGSF3O75054 1194 aa24.75■■□□□ 1.55
SPSB3-208ENST00000566339 URI1O94763 535 aaPredicted RBP24.75■■□□□ 1.55
SPSB3-208ENST00000566339 PLA2G4AP47712 749 aa24.75■■□□□ 1.55
SPSB3-208ENST00000566339 SARSP49591 514 aaKnown RBP24.75■■□□□ 1.55
SPSB3-208ENST00000566339 PCDHA5Q9Y5H7 936 aa24.75■■□□□ 1.55
SPSB3-208ENST00000566339 RIC1Q4ADV7 1423 aa24.74■■□□□ 1.55
SPSB3-208ENST00000566339 FMNL1O95466 1100 aaPredicted RBP24.74■■□□□ 1.55
SPSB3-208ENST00000566339 ERCC5P28715 1186 aaPredicted RBP24.74■■□□□ 1.55
SPSB3-208ENST00000566339 PNOCQ13519 176 aa24.74■■□□□ 1.55
SPSB3-208ENST00000566339 SAFBQ15424 915 aaKnown RBP eCLIP24.74■■□□□ 1.55
SPSB3-208ENST00000566339 RILPL1Q5EBL4 403 aa24.74■■□□□ 1.55
SPSB3-208ENST00000566339 TAF7LQ5H9L4 462 aa24.74■■□□□ 1.55
SPSB3-208ENST00000566339 SPECC1LQ69YQ0 1117 aa24.74■■□□□ 1.55
SPSB3-208ENST00000566339 IGDCC4Q8TDY8 1250 aa24.74■■□□□ 1.55
SPSB3-208ENST00000566339 RABGGTAQ92696 567 aa24.74■■□□□ 1.55
SPSB3-208ENST00000566339 NAA15Q9BXJ9 866 aaKnown RBP24.74■■□□□ 1.55
SPSB3-208ENST00000566339 TEX13AQ9BXU3 409 aaPredicted RBP24.74■■□□□ 1.55
SPSB3-208ENST00000566339 NBPF3Q9H094 633 aa24.74■■□□□ 1.55
SPSB3-208ENST00000566339 CNNM2Q9H8M5 875 aa24.74■■□□□ 1.55
SPSB3-208ENST00000566339 FANCLQ9NW38 375 aa24.74■■□□□ 1.55
SPSB3-208ENST00000566339 TIAM2Q8IVF5 1701 aa24.74■■□□□ 1.55
SPSB3-208ENST00000566339 ECM29Q5VYK3 1845 aa24.74■■□□□ 1.55
SPSB3-208ENST00000566339 PPFIA3O75145 1194 aa24.73■■□□□ 1.55
SPSB3-208ENST00000566339 UQCRFS1P1P0C7P4 283 aa24.73■■□□□ 1.55
SPSB3-208ENST00000566339 IFNAR1P17181 557 aa24.73■■□□□ 1.55
SPSB3-208ENST00000566339 SSRP1Q08945 709 aaKnown RBP24.73■■□□□ 1.55
SPSB3-208ENST00000566339 ZBTB38Q8NAP3 1195 aaPredicted RBP24.73■■□□□ 1.55
SPSB3-208ENST00000566339 FOXP1Q9H334 677 aaPredicted RBP24.73■■□□□ 1.55
SPSB3-208ENST00000566339 CEP131Q9UPN4 1083 aa24.73■■□□□ 1.55
SPSB3-208ENST00000566339 COL14A1Q05707 1796 aaKnown RBP24.73■■□□□ 1.55
SPSB3-208ENST00000566339 GOLGA8AA7E2F4 631 aa24.72■■□□□ 1.55
SPSB3-208ENST00000566339 PTPREP23469 700 aa24.72■■□□□ 1.55
SPSB3-208ENST00000566339 VPS72Q15906 364 aa24.72■■□□□ 1.55
SPSB3-208ENST00000566339 LONRF3Q496Y0 759 aa24.72■■□□□ 1.55
SPSB3-208ENST00000566339 MSL3Q8N5Y2 521 aaKnown RBP24.72■■□□□ 1.55
SPSB3-208ENST00000566339 UPF1Q92900 1129 aaKnown RBP eCLIP24.72■■□□□ 1.55
SPSB3-208ENST00000566339 CARD10Q9BWT7 1032 aa24.72■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms