RNA–Protein interactions for RNA: ENST00000566069.5

PALB2-204, Transcript of partner and localizer of BRCA2, humanhuman

TSL 5

Gene PALB2, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-204ENST00000566069 FLAD1Q8NFF5 587 aa6.68□□□□□ -1.34
PALB2-204ENST00000566069 PCOLCE2Q9UKZ9 415 aa6.68□□□□□ -1.34
PALB2-204ENST00000566069 TMEM265A0A087WTH1 108 aa6.67□□□□□ -1.34
PALB2-204ENST00000566069 TMEM238LA0A1B0GVL6 79 aa6.67□□□□□ -1.34
PALB2-204ENST00000566069 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.67□□□□□ -1.34
PALB2-204ENST00000566069 RNGTTO60942 597 aaKnown RBP6.67□□□□□ -1.34
PALB2-204ENST00000566069 ZNF865P0CJ78 1059 aaPredicted RBP6.67□□□□□ -1.34
PALB2-204ENST00000566069 KRTAP19-4Q3LI73 84 aa6.67□□□□□ -1.34
PALB2-204ENST00000566069 PRPF40BQ6NWY9 871 aaKnown RBP6.67□□□□□ -1.34
PALB2-204ENST00000566069 PDZD3Q86UT5 571 aa6.67□□□□□ -1.34
PALB2-204ENST00000566069 C1QL4Q86Z23 238 aa6.67□□□□□ -1.34
PALB2-204ENST00000566069 LRRC10BA6NIK2 292 aa6.66□□□□□ -1.34
PALB2-204ENST00000566069 CFPP27918 469 aa6.66□□□□□ -1.34
PALB2-204ENST00000566069 ANGEL2Q5VTE6 544 aaKnown RBP6.66□□□□□ -1.34
PALB2-204ENST00000566069 BHLHE22Q8NFJ8 381 aaPredicted RBP6.66□□□□□ -1.34
PALB2-204ENST00000566069 CCER1Q8TC90 406 aaPredicted RBP6.66□□□□□ -1.34
PALB2-204ENST00000566069 STK35Q8TDR2 534 aa6.66□□□□□ -1.34
PALB2-204ENST00000566069 SLC38A3Q99624 504 aa6.66□□□□□ -1.34
PALB2-204ENST00000566069 KRTAP4-5Q9BYR2 181 aa6.66□□□□□ -1.34
PALB2-204ENST00000566069 KRT82Q9NSB4 513 aa6.66□□□□□ -1.34
PALB2-204ENST00000566069 ICMTO60725 284 aa6.65□□□□□ -1.34
PALB2-204ENST00000566069 CPNE3O75131 537 aaKnown RBP6.65□□□□□ -1.34
PALB2-204ENST00000566069 IGHA2P01877 340 aa6.65□□□□□ -1.34
PALB2-204ENST00000566069 GSTP1P09211 210 aaKnown RBP6.65□□□□□ -1.34
PALB2-204ENST00000566069 MLANAQ16655 118 aa6.65□□□□□ -1.34
PALB2-204ENST00000566069 FYB2Q5VWT5 728 aa6.65□□□□□ -1.34
PALB2-204ENST00000566069 ZSWIM9Q86XI8 627 aa6.65□□□□□ -1.34
PALB2-204ENST00000566069 ISL2Q96A47 359 aa6.65□□□□□ -1.34
PALB2-204ENST00000566069 CCDC74AQ96AQ1 378 aa6.65□□□□□ -1.34
PALB2-204ENST00000566069 SNX11Q9Y5W9 270 aa6.65□□□□□ -1.34
PALB2-204ENST00000566069 LCNL1Q6ZST4 164 aa6.64□□□□□ -1.35
PALB2-204ENST00000566069 TOP6BLQ8N6T0 577 aa6.64□□□□□ -1.35
PALB2-204ENST00000566069 LIN37Q96GY3 246 aaPredicted RBP6.64□□□□□ -1.35
PALB2-204ENST00000566069 FAM129BQ96TA1 746 aa6.64□□□□□ -1.35
PALB2-204ENST00000566069 MTMR7Q9Y216 660 aa6.64□□□□□ -1.35
PALB2-204ENST00000566069 KRT1P04264 644 aa6.63□□□□□ -1.35
PALB2-204ENST00000566069 ITIH2P19823 946 aa6.63□□□□□ -1.35
PALB2-204ENST00000566069 ARHGAP4P98171 946 aa6.63□□□□□ -1.35
PALB2-204ENST00000566069 ZC3H12AQ5D1E8 599 aaKnown RBP6.63□□□□□ -1.35
PALB2-204ENST00000566069 LCE5AQ5TCM9 118 aa6.63□□□□□ -1.35
PALB2-204ENST00000566069 SPACA3Q8IXA5 215 aa6.63□□□□□ -1.35
PALB2-204ENST00000566069 FAM53CQ9NYF3 392 aa6.63□□□□□ -1.35
PALB2-204ENST00000566069 BRPF3Q9ULD4 1205 aa6.63□□□□□ -1.35
PALB2-204ENST00000566069 CTNND2Q9UQB3 1225 aa6.63□□□□□ -1.35
PALB2-204ENST00000566069 NEFLP07196 543 aa6.62□□□□□ -1.35
PALB2-204ENST00000566069 GRM2Q14416 872 aa6.62□□□□□ -1.35
PALB2-204ENST00000566069 NKPD1Q17RQ9 610 aa6.62□□□□□ -1.35
PALB2-204ENST00000566069 ARHGAP27Q6ZUM4 889 aa6.62□□□□□ -1.35
PALB2-204ENST00000566069 EIF1AYO14602 144 aaKnown RBP6.61□□□□□ -1.35
PALB2-204ENST00000566069 RAP1GAPP47736 663 aa6.61□□□□□ -1.35
PALB2-204ENST00000566069 ZP2Q05996 745 aa6.61□□□□□ -1.35
PALB2-204ENST00000566069 KCNMB1Q16558 191 aa6.61□□□□□ -1.35
PALB2-204ENST00000566069 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.61□□□□□ -1.35
PALB2-204ENST00000566069 RNF214Q8ND24 703 aa6.61□□□□□ -1.35
PALB2-204ENST00000566069 KCNB2Q92953 911 aa6.61□□□□□ -1.35
PALB2-204ENST00000566069 EGFL7Q9UHF1 273 aa6.61□□□□□ -1.35
PALB2-204ENST00000566069 USTQ9Y2C2 406 aa6.61□□□□□ -1.35
PALB2-204ENST00000566069 IGF2BP3O00425 579 aaKnown RBP eCLIP6.6□□□□□ -1.35
PALB2-204ENST00000566069 NTF4P34130 210 aa6.6□□□□□ -1.35
PALB2-204ENST00000566069 MPRIPQ6WCQ1 1025 aa6.6□□□□□ -1.35
PALB2-204ENST00000566069 PRR23BQ6ZRT6 265 aa6.6□□□□□ -1.35
PALB2-204ENST00000566069 UBE3DQ7Z6J8 389 aa6.6□□□□□ -1.35
PALB2-204ENST00000566069 EPS8L3Q8TE67 593 aaKnown RBP6.6□□□□□ -1.35
PALB2-204ENST00000566069 ASB11Q8WXH4 323 aa6.6□□□□□ -1.35
PALB2-204ENST00000566069 CACNA2D2Q9NY47 1150 aa6.6□□□□□ -1.35
PALB2-204ENST00000566069 GPR182O15218 404 aa6.59□□□□□ -1.35
PALB2-204ENST00000566069 GADD45BO75293 160 aaPredicted RBP6.59□□□□□ -1.35
PALB2-204ENST00000566069 TSPAN15O95858 294 aa6.59□□□□□ -1.35
PALB2-204ENST00000566069 ERVK-24P63145 666 aa6.59□□□□□ -1.35
PALB2-204ENST00000566069 RETREG2Q8NC44 543 aa6.59□□□□□ -1.35
PALB2-204ENST00000566069 TOX2Q96NM4 488 aa6.59□□□□□ -1.35
PALB2-204ENST00000566069 NIF3L1Q9GZT8 377 aa6.59□□□□□ -1.35
PALB2-204ENST00000566069 DNAJC25Q9H1X3 360 aa6.59□□□□□ -1.35
PALB2-204ENST00000566069 SSU72Q9NP77 194 aaKnown RBP6.59□□□□□ -1.35
PALB2-204ENST00000566069 TMEM39AQ9NV64 488 aa6.59□□□□□ -1.35
PALB2-204ENST00000566069 ARNTP27540 789 aa6.58□□□□□ -1.36
PALB2-204ENST00000566069 SERPINB4P48594 390 aa6.58□□□□□ -1.36
PALB2-204ENST00000566069 PDE4CQ08493 712 aa6.58□□□□□ -1.36
PALB2-204ENST00000566069 IKZF1Q13422 519 aa6.58□□□□□ -1.36
PALB2-204ENST00000566069 C19orf73Q9NVV2 129 aa6.58□□□□□ -1.36
PALB2-204ENST00000566069 TRAK1Q9UPV9 953 aa6.58□□□□□ -1.36
PALB2-204ENST00000566069 PITPNM2Q9BZ72 1349 aa6.57□□□□□ -1.36
PALB2-204ENST00000566069 H3BRB1 525 aa6.57□□□□□ -1.36
PALB2-204ENST00000566069 EOMESO95936 686 aa6.57□□□□□ -1.36
PALB2-204ENST00000566069 FCGRTP55899 365 aa6.57□□□□□ -1.36
PALB2-204ENST00000566069 RING1Q06587 406 aa6.57□□□□□ -1.36
PALB2-204ENST00000566069 ZNF252P-AS1Q0IIN9 211 aa6.57□□□□□ -1.36
PALB2-204ENST00000566069 PDE3BQ13370 1112 aa6.57□□□□□ -1.36
PALB2-204ENST00000566069 PPM1JQ5JR12 505 aa6.57□□□□□ -1.36
PALB2-204ENST00000566069 LILRA6Q6PI73 481 aa6.57□□□□□ -1.36
PALB2-204ENST00000566069 SYDE1Q6ZW31 735 aaPredicted RBP6.57□□□□□ -1.36
PALB2-204ENST00000566069 SIAH1Q8IUQ4 282 aa6.57□□□□□ -1.36
PALB2-204ENST00000566069 SULF2Q8IWU5 870 aa6.57□□□□□ -1.36
PALB2-204ENST00000566069 LRRC56Q8IYG6 542 aaPredicted RBP6.57□□□□□ -1.36
PALB2-204ENST00000566069 GPBAR1Q8TDU6 330 aa6.57□□□□□ -1.36
PALB2-204ENST00000566069 TUT1Q9H6E5 874 aaKnown RBP6.57□□□□□ -1.36
PALB2-204ENST00000566069 PRDM10Q9NQV6 1147 aa6.57□□□□□ -1.36
PALB2-204ENST00000566069 GPN3Q9UHW5 284 aaPredicted RBP6.57□□□□□ -1.36
PALB2-204ENST00000566069 CNTNAP4Q9C0A0 1308 aa6.56□□□□□ -1.36
PALB2-204ENST00000566069 NDUFB5O43674 189 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms