RNA–Protein interactions for RNA: ENST00000565556.5

CNEP1R1-206, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CNEP1R1, Length 1,707 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-206ENST00000565556 HDLBPQ00341 1268 aaKnown RBP11.09□□□□□ -0.63
CNEP1R1-206ENST00000565556 DIXDC1Q155Q3 683 aa11.09□□□□□ -0.63
CNEP1R1-206ENST00000565556 CSPP1Q1MSJ5 1256 aa11.09□□□□□ -0.63
CNEP1R1-206ENST00000565556 NIM1KQ8IY84 436 aa11.09□□□□□ -0.63
CNEP1R1-206ENST00000565556 CERS5Q8N5B7 392 aa11.09□□□□□ -0.63
CNEP1R1-206ENST00000565556 NLGN2Q8NFZ4 835 aa11.09□□□□□ -0.63
CNEP1R1-206ENST00000565556 NEK1Q96PY6 1258 aa11.09□□□□□ -0.63
CNEP1R1-206ENST00000565556 UPF3BQ9BZI7 483 aaKnown RBP11.09□□□□□ -0.63
CNEP1R1-206ENST00000565556 PDCL3Q9H2J4 239 aa11.09□□□□□ -0.63
CNEP1R1-206ENST00000565556 CCDC39Q9UFE4 941 aa11.09□□□□□ -0.63
CNEP1R1-206ENST00000565556 ZNRF3Q9ULT6 936 aa11.09□□□□□ -0.63
CNEP1R1-206ENST00000565556 TTF2Q9UNY4 1162 aaKnown RBP11.09□□□□□ -0.63
CNEP1R1-206ENST00000565556 ZDHHC9Q9Y397 364 aa11.09□□□□□ -0.63
CNEP1R1-206ENST00000565556 ZNF646O15015 1829 aaPredicted RBP11.08□□□□□ -0.64
CNEP1R1-206ENST00000565556 E7EWF7 191 aa11.08□□□□□ -0.64
CNEP1R1-206ENST00000565556 PRKAB2O43741 272 aa11.08□□□□□ -0.64
CNEP1R1-206ENST00000565556 HHIPL2Q6UWX4 724 aa11.08□□□□□ -0.64
CNEP1R1-206ENST00000565556 JDP2Q8WYK2 163 aa11.08□□□□□ -0.64
CNEP1R1-206ENST00000565556 TEKT1Q969V4 418 aa11.08□□□□□ -0.64
CNEP1R1-206ENST00000565556 SYAP1Q96A49 352 aaPredicted RBP11.08□□□□□ -0.64
CNEP1R1-206ENST00000565556 ALDH8A1Q9H2A2 487 aaPredicted RBP11.08□□□□□ -0.64
CNEP1R1-206ENST00000565556 EPB41L4AQ9HCS5 686 aaPredicted RBP11.08□□□□□ -0.64
CNEP1R1-206ENST00000565556 PDRG1Q9NUG6 133 aa11.08□□□□□ -0.64
CNEP1R1-206ENST00000565556 YDJCA8MPS7 323 aa11.07□□□□□ -0.64
CNEP1R1-206ENST00000565556 RPS6KB1P23443 525 aa11.07□□□□□ -0.64
CNEP1R1-206ENST00000565556 BTDP43251 543 aa11.07□□□□□ -0.64
CNEP1R1-206ENST00000565556 TRDNQ13061 729 aa11.07□□□□□ -0.64
CNEP1R1-206ENST00000565556 ANKRD1Q15327 319 aa11.07□□□□□ -0.64
CNEP1R1-206ENST00000565556 TTC14Q96N46 770 aa11.07□□□□□ -0.64
CNEP1R1-206ENST00000565556 FHDC1Q9C0D6 1143 aaPredicted RBP11.07□□□□□ -0.64
CNEP1R1-206ENST00000565556 KCNQ5Q9NR82 932 aa11.07□□□□□ -0.64
CNEP1R1-206ENST00000565556 RBM27Q9P2N5 1060 aaKnown RBP11.07□□□□□ -0.64
CNEP1R1-206ENST00000565556 ZKSCAN5Q9Y2L8 839 aa11.07□□□□□ -0.64
CNEP1R1-206ENST00000565556 NFKBIEO00221 500 aa11.06□□□□□ -0.64
CNEP1R1-206ENST00000565556 HAND2P61296 217 aa11.06□□□□□ -0.64
CNEP1R1-206ENST00000565556 CUL4AQ13619 759 aa11.06□□□□□ -0.64
CNEP1R1-206ENST00000565556 NCOA7Q8NI08 942 aa11.06□□□□□ -0.64
CNEP1R1-206ENST00000565556 SDR42E1Q8WUS8 393 aa11.06□□□□□ -0.64
CNEP1R1-206ENST00000565556 INTS4Q96HW7 963 aaKnown RBP11.06□□□□□ -0.64
CNEP1R1-206ENST00000565556 TMX3Q96JJ7 454 aa11.06□□□□□ -0.64
CNEP1R1-206ENST00000565556 MAP7D2Q96T17 732 aa11.06□□□□□ -0.64
CNEP1R1-206ENST00000565556 TMEM63CQ9P1W3 806 aa11.06□□□□□ -0.64
CNEP1R1-206ENST00000565556 ANAPC4Q9UJX5 808 aa11.06□□□□□ -0.64
CNEP1R1-206ENST00000565556 TAF6LQ9Y6J9 622 aa11.06□□□□□ -0.64
CNEP1R1-206ENST00000565556 F8W031 263 aaPredicted RBP11.06□□□□□ -0.64
CNEP1R1-206ENST00000565556 BRD1O95696 1058 aa11.06□□□□□ -0.64
CNEP1R1-206ENST00000565556 VIL1P09327 827 aaKnown RBP11.06□□□□□ -0.64
CNEP1R1-206ENST00000565556 USP5P45974 858 aa11.06□□□□□ -0.64
CNEP1R1-206ENST00000565556 SBK1Q52WX2 424 aa11.06□□□□□ -0.64
CNEP1R1-206ENST00000565556 RSBN1LQ6PCB5 846 aaPredicted RBP11.06□□□□□ -0.64
CNEP1R1-206ENST00000565556 STOX1Q6ZVD7 989 aa11.06□□□□□ -0.64
CNEP1R1-206ENST00000565556 DHX32Q7L7V1 743 aaKnown RBP11.06□□□□□ -0.64
CNEP1R1-206ENST00000565556 RALYLQ86SE5 291 aaKnown RBP11.06□□□□□ -0.64
CNEP1R1-206ENST00000565556 AMOTL1Q8IY63 956 aa11.06□□□□□ -0.64
CNEP1R1-206ENST00000565556 SH3RF3Q8TEJ3 882 aaPredicted RBP11.06□□□□□ -0.64
CNEP1R1-206ENST00000565556 MXD3Q9BW11 206 aa11.06□□□□□ -0.64
CNEP1R1-206ENST00000565556 RNF41Q9H4P4 317 aaPredicted RBP11.06□□□□□ -0.64
CNEP1R1-206ENST00000565556 CNNM2Q9H8M5 875 aa11.06□□□□□ -0.64
CNEP1R1-206ENST00000565556 DCP1AQ9NPI6 582 aaPredicted RBP11.06□□□□□ -0.64
CNEP1R1-206ENST00000565556 SERPINA10Q9UK55 444 aa11.06□□□□□ -0.64
CNEP1R1-206ENST00000565556 DAGLAQ9Y4D2 1042 aa11.06□□□□□ -0.64
CNEP1R1-206ENST00000565556 BAZ2AQ9UIF9 1905 aaKnown RBP11.05□□□□□ -0.64
CNEP1R1-206ENST00000565556 TIAM2Q8IVF5 1701 aa11.05□□□□□ -0.64
CNEP1R1-206ENST00000565556 SYCE3A1L190 88 aa11.05□□□□□ -0.64
CNEP1R1-206ENST00000565556 SLC3A2P08195 630 aaKnown RBP11.05□□□□□ -0.64
CNEP1R1-206ENST00000565556 PCP11498 1178 aaKnown RBP11.05□□□□□ -0.64
CNEP1R1-206ENST00000565556 CRKP46108 304 aa11.05□□□□□ -0.64
CNEP1R1-206ENST00000565556 MMP14P50281 582 aa11.05□□□□□ -0.64
CNEP1R1-206ENST00000565556 AK2P54819 239 aa11.05□□□□□ -0.64
CNEP1R1-206ENST00000565556 PPARAQ07869 468 aa11.05□□□□□ -0.64
CNEP1R1-206ENST00000565556 TNIP1Q15025 636 aa11.05□□□□□ -0.64
CNEP1R1-206ENST00000565556 KIAA0825Q8IV33 1275 aa11.05□□□□□ -0.64
CNEP1R1-206ENST00000565556 TEX11Q8IYF3 940 aa11.05□□□□□ -0.64
CNEP1R1-206ENST00000565556 ZSCAN31Q96LW9 406 aaPredicted RBP11.05□□□□□ -0.64
CNEP1R1-206ENST00000565556 ZDHHC15Q96MV8 337 aa11.05□□□□□ -0.64
CNEP1R1-206ENST00000565556 SYT17Q9BSW7 474 aa11.05□□□□□ -0.64
CNEP1R1-206ENST00000565556 KRT23Q9C075 422 aa11.05□□□□□ -0.64
CNEP1R1-206ENST00000565556 ARPP21Q9UBL0 812 aaPredicted RBP11.05□□□□□ -0.64
CNEP1R1-206ENST00000565556 LIMCH1Q9UPQ0 1083 aa11.05□□□□□ -0.64
CNEP1R1-206ENST00000565556 CDK5RAP2Q96SN8 1893 aa11.05□□□□□ -0.64
CNEP1R1-206ENST00000565556 WDR19Q8NEZ3 1342 aa11.05□□□□□ -0.64
CNEP1R1-206ENST00000565556 FOCADQ5VW36 1801 aa11.05□□□□□ -0.64
CNEP1R1-206ENST00000565556 COL4A5P29400 1685 aa11.04□□□□□ -0.64
CNEP1R1-206ENST00000565556 PSMD14O00487 310 aa11.04□□□□□ -0.64
CNEP1R1-206ENST00000565556 RAD17O75943 681 aa11.04□□□□□ -0.64
CNEP1R1-206ENST00000565556 CPA1P15085 419 aa11.04□□□□□ -0.64
CNEP1R1-206ENST00000565556 NT5C2P49902 561 aa11.04□□□□□ -0.64
CNEP1R1-206ENST00000565556 SCNN1DP51172 638 aa11.04□□□□□ -0.64
CNEP1R1-206ENST00000565556 EXOSC10Q01780 885 aaKnown RBP11.04□□□□□ -0.64
CNEP1R1-206ENST00000565556 AKNAD1Q5T1N1 836 aa11.04□□□□□ -0.64
CNEP1R1-206ENST00000565556 CTR9Q6PD62 1173 aa11.04□□□□□ -0.64
CNEP1R1-206ENST00000565556 MFSD6Q6ZSS7 791 aa11.04□□□□□ -0.64
CNEP1R1-206ENST00000565556 AGBL3Q8NEM8 1001 aa11.04□□□□□ -0.64
CNEP1R1-206ENST00000565556 STAG1Q8WVM7 1258 aa11.04□□□□□ -0.64
CNEP1R1-206ENST00000565556 NBPF3Q9H094 633 aa11.04□□□□□ -0.64
CNEP1R1-206ENST00000565556 TSPY26PQ9H489 355 aa11.04□□□□□ -0.64
CNEP1R1-206ENST00000565556 HDAC9Q9UKV0 1011 aa11.04□□□□□ -0.64
CNEP1R1-206ENST00000565556 LAMB1P07942 1786 aa11.04□□□□□ -0.64
CNEP1R1-206ENST00000565556 NAV1Q8NEY1 1877 aa11.04□□□□□ -0.64
CNEP1R1-206ENST00000565556 MINDY4BA8MYZ0 360 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms