RNA–Protein interactions for RNA: ENST00000565119.1

CHD9-214, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 824 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-214ENST00000565119 SNX11Q9Y5W9 270 aa8.63□□□□□ -1.03
CHD9-214ENST00000565119 ZNF862O60290 1169 aa8.62□□□□□ -1.03
CHD9-214ENST00000565119 FZD6O60353 706 aa8.62□□□□□ -1.03
CHD9-214ENST00000565119 NPR3P17342 541 aa8.62□□□□□ -1.03
CHD9-214ENST00000565119 IKZF1Q13422 519 aa8.62□□□□□ -1.03
CHD9-214ENST00000565119 TTLL4Q14679 1199 aa8.62□□□□□ -1.03
CHD9-214ENST00000565119 GJD3Q8N144 294 aa8.62□□□□□ -1.03
CHD9-214ENST00000565119 ZC3H12CQ9C0D7 883 aaKnown RBP8.62□□□□□ -1.03
CHD9-214ENST00000565119 PCDHGC5Q9Y5F6 944 aa8.62□□□□□ -1.03
CHD9-214ENST00000565119 RNGTTO60942 597 aaKnown RBP8.61□□□□□ -1.03
CHD9-214ENST00000565119 GLI1P08151 1106 aa8.61□□□□□ -1.03
CHD9-214ENST00000565119 ITPKAP23677 461 aa8.61□□□□□ -1.03
CHD9-214ENST00000565119 AFMP43652 599 aa8.61□□□□□ -1.03
CHD9-214ENST00000565119 AMIGO3Q86WK7 504 aa8.61□□□□□ -1.03
CHD9-214ENST00000565119 TOP6BLQ8N6T0 577 aa8.61□□□□□ -1.03
CHD9-214ENST00000565119 SLFN14P0C7P3 912 aa8.6□□□□□ -1.03
CHD9-214ENST00000565119 HCLS1P14317 486 aaPredicted RBP8.6□□□□□ -1.03
CHD9-214ENST00000565119 FAM214BQ7L5A3 538 aa8.6□□□□□ -1.03
CHD9-214ENST00000565119 ASB11Q8WXH4 323 aa8.6□□□□□ -1.03
CHD9-214ENST00000565119 PCOLCE2Q9UKZ9 415 aa8.6□□□□□ -1.03
CHD9-214ENST00000565119 NEFMP07197 916 aa8.59□□□□□ -1.03
CHD9-214ENST00000565119 INHBBP09529 407 aa8.59□□□□□ -1.03
CHD9-214ENST00000565119 KIF4BQ2VIQ3 1234 aa8.59□□□□□ -1.03
CHD9-214ENST00000565119 KIAA0319Q5VV43 1072 aa8.59□□□□□ -1.03
CHD9-214ENST00000565119 KRTAP5-3Q6L8H2 238 aa8.59□□□□□ -1.03
CHD9-214ENST00000565119 MPZL3Q6UWV2 235 aa8.59□□□□□ -1.03
CHD9-214ENST00000565119 CCDC87Q9NVE4 849 aa8.59□□□□□ -1.03
CHD9-214ENST00000565119 NPIPB6E9PJ23 425 aa8.58□□□□□ -1.04
CHD9-214ENST00000565119 NFIBO00712 420 aa8.58□□□□□ -1.04
CHD9-214ENST00000565119 SPACA3Q8IXA5 215 aa8.58□□□□□ -1.04
CHD9-214ENST00000565119 USPL1Q5W0Q7 1092 aa8.57□□□□□ -1.04
CHD9-214ENST00000565119 KIRREL1Q96J84 757 aa8.57□□□□□ -1.04
CHD9-214ENST00000565119 JAG2Q9Y219 1238 aa8.57□□□□□ -1.04
CHD9-214ENST00000565119 TMEM67Q5HYA8 995 aa8.56□□□□□ -1.04
CHD9-214ENST00000565119 ISL2Q96A47 359 aa8.56□□□□□ -1.04
CHD9-214ENST00000565119 FAM13AO94988 1023 aa8.55□□□□□ -1.04
CHD9-214ENST00000565119 ZNF157P51786 506 aaPredicted RBP8.55□□□□□ -1.04
CHD9-214ENST00000565119 CTSWP56202 376 aa8.55□□□□□ -1.04
CHD9-214ENST00000565119 NKPD1Q17RQ9 610 aa8.55□□□□□ -1.04
CHD9-214ENST00000565119 FBXO15Q8NCQ5 510 aaPredicted RBP8.55□□□□□ -1.04
CHD9-214ENST00000565119 PRKCSHP14314 528 aaPredicted RBP8.54□□□□□ -1.04
CHD9-214ENST00000565119 FAAP100Q0VG06 881 aa8.54□□□□□ -1.04
CHD9-214ENST00000565119 CYFIP1Q7L576 1253 aa8.54□□□□□ -1.04
CHD9-214ENST00000565119 DIRC2Q96SL1 478 aa8.54□□□□□ -1.04
CHD9-214ENST00000565119 EHD4Q9H223 541 aa8.54□□□□□ -1.04
CHD9-214ENST00000565119 KCNK12Q9HB15 430 aa8.54□□□□□ -1.04
CHD9-214ENST00000565119 C19orf73Q9NVV2 129 aa8.54□□□□□ -1.04
CHD9-214ENST00000565119 GSTP1P09211 210 aaKnown RBP8.53□□□□□ -1.04
CHD9-214ENST00000565119 PTPN12Q05209 780 aaKnown RBP8.53□□□□□ -1.04
CHD9-214ENST00000565119 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.53□□□□□ -1.04
CHD9-214ENST00000565119 NSUN3Q9H649 340 aaKnown RBP8.53□□□□□ -1.04
CHD9-214ENST00000565119 CD320Q9NPF0 282 aa8.53□□□□□ -1.04
CHD9-214ENST00000565119 KRT82Q9NSB4 513 aa8.53□□□□□ -1.04
CHD9-214ENST00000565119 PITPNM2Q9BZ72 1349 aa8.53□□□□□ -1.04
CHD9-214ENST00000565119 IGF2BP3O00425 579 aaKnown RBP eCLIP8.52□□□□□ -1.05
CHD9-214ENST00000565119 C20orf173Q96LM9 149 aa8.52□□□□□ -1.05
CHD9-214ENST00000565119 ABCB6Q9NP58 842 aa8.52□□□□□ -1.05
CHD9-214ENST00000565119 SSU72Q9NP77 194 aaKnown RBP8.52□□□□□ -1.05
CHD9-214ENST00000565119 KCNA10Q16322 511 aa8.51□□□□□ -1.05
CHD9-214ENST00000565119 RPS26P11Q5JNZ5 115 aaPredicted RBP8.51□□□□□ -1.05
CHD9-214ENST00000565119 PBXIP1Q96AQ6 731 aa8.51□□□□□ -1.05
CHD9-214ENST00000565119 GTF2IRD1Q9UHL9 959 aa8.51□□□□□ -1.05
CHD9-214ENST00000565119 TMEM253P0C7T8 217 aa8.5□□□□□ -1.05
CHD9-214ENST00000565119 HOXA5P20719 270 aa8.5□□□□□ -1.05
CHD9-214ENST00000565119 ATG14Q6ZNE5 492 aa8.5□□□□□ -1.05
CHD9-214ENST00000565119 CARS2Q9HA77 564 aaKnown RBP8.5□□□□□ -1.05
CHD9-214ENST00000565119 NPHS2Q9NP85 383 aa8.49□□□□□ -1.05
CHD9-214ENST00000565119 SSFA2P28290 1259 aa8.48□□□□□ -1.05
CHD9-214ENST00000565119 CLCN7P51798 805 aa8.48□□□□□ -1.05
CHD9-214ENST00000565119 ZC3H12AQ5D1E8 599 aaKnown RBP8.48□□□□□ -1.05
CHD9-214ENST00000565119 CIAPIN1Q6FI81 312 aa8.48□□□□□ -1.05
CHD9-214ENST00000565119 PDZD3Q86UT5 571 aa8.48□□□□□ -1.05
CHD9-214ENST00000565119 RNF214Q8ND24 703 aa8.48□□□□□ -1.05
CHD9-214ENST00000565119 PRDM10Q9NQV6 1147 aa8.48□□□□□ -1.05
CHD9-214ENST00000565119 MED14OSP0DP75 135 aa8.47□□□□□ -1.05
CHD9-214ENST00000565119 GDNFP39905 211 aa8.47□□□□□ -1.05
CHD9-214ENST00000565119 PRPF40BQ6NWY9 871 aaKnown RBP8.47□□□□□ -1.05
CHD9-214ENST00000565119 TMEM238LA0A1B0GVL6 79 aa8.46□□□□□ -1.06
CHD9-214ENST00000565119 FKBP4Q02790 459 aaKnown RBP eCLIP8.46□□□□□ -1.06
CHD9-214ENST00000565119 SF3B2Q13435 895 aaKnown RBP8.46□□□□□ -1.06
CHD9-214ENST00000565119 KCNB2Q92953 911 aa8.46□□□□□ -1.06
CHD9-214ENST00000565119 SMG5Q9UPR3 1016 aaKnown RBP8.46□□□□□ -1.06
CHD9-214ENST00000565119 ETV2O00321 342 aaPredicted RBP8.45□□□□□ -1.06
CHD9-214ENST00000565119 ERVK-24P63145 666 aa8.45□□□□□ -1.06
CHD9-214ENST00000565119 ATP13A1Q9HD20 1204 aa8.45□□□□□ -1.06
CHD9-214ENST00000565119 DCP1AQ9NPI6 582 aaPredicted RBP8.45□□□□□ -1.06
CHD9-214ENST00000565119 ANO2Q9NQ90 1003 aa8.45□□□□□ -1.06
CHD9-214ENST00000565119 TCAF2A6NFQ2 919 aa8.44□□□□□ -1.06
CHD9-214ENST00000565119 GNAT3A8MTJ3 354 aa8.44□□□□□ -1.06
CHD9-214ENST00000565119 HNRNPUQ00839 825 aaKnown RBP eCLIP8.44□□□□□ -1.06
CHD9-214ENST00000565119 UBE3DQ7Z6J8 389 aa8.44□□□□□ -1.06
CHD9-214ENST00000565119 STK35Q8TDR2 534 aa8.44□□□□□ -1.06
CHD9-214ENST00000565119 RELTQ969Z4 430 aa8.44□□□□□ -1.06
CHD9-214ENST00000565119 EPB41L4BQ9H329 900 aa8.44□□□□□ -1.06
CHD9-214ENST00000565119 SEMA3GQ9NS98 782 aa8.44□□□□□ -1.06
CHD9-214ENST00000565119 EOMESO95936 686 aa8.43□□□□□ -1.06
CHD9-214ENST00000565119 NTF4P34130 210 aa8.43□□□□□ -1.06
CHD9-214ENST00000565119 ORC1Q13415 861 aa8.43□□□□□ -1.06
CHD9-214ENST00000565119 NUAK1O60285 661 aa8.42□□□□□ -1.06
CHD9-214ENST00000565119 GLDCP23378 1020 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms