RNA–Protein interactions for RNA: ENST00000564844.1

MAP1LC3B-206, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 3,085 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-206ENST00000564844 AK7Q96M32 723 aa23.46■■□□□ 1.35
MAP1LC3B-206ENST00000564844 CDC5LQ99459 802 aaKnown RBP23.46■■□□□ 1.35
MAP1LC3B-206ENST00000564844 RASSF4Q9H2L5 321 aa23.46■■□□□ 1.35
MAP1LC3B-206ENST00000564844 SLC52A2Q9HAB3 445 aa23.46■■□□□ 1.35
MAP1LC3B-206ENST00000564844 TOMM22Q9NS69 142 aa23.46■■□□□ 1.35
MAP1LC3B-206ENST00000564844 FAN1Q9Y2M0 1017 aa23.46■■□□□ 1.35
MAP1LC3B-206ENST00000564844 BTBD18B2RXH4 712 aa23.46■■□□□ 1.35
MAP1LC3B-206ENST00000564844 RSRC2Q7L4I2 434 aaKnown RBP23.46■■□□□ 1.35
MAP1LC3B-206ENST00000564844 DHX37Q8IY37 1157 aaKnown RBP23.46■■□□□ 1.35
MAP1LC3B-206ENST00000564844 MB21D2Q8IYB1 491 aaPredicted RBP23.46■■□□□ 1.35
MAP1LC3B-206ENST00000564844 C19orf44Q9H6X5 657 aa23.46■■□□□ 1.35
MAP1LC3B-206ENST00000564844 LAMA4Q16363 1823 aa23.45■■□□□ 1.34
MAP1LC3B-206ENST00000564844 TPM1P09493 284 aa23.45■■□□□ 1.34
MAP1LC3B-206ENST00000564844 RABL6Q3YEC7 729 aaPredicted RBP23.45■■□□□ 1.34
MAP1LC3B-206ENST00000564844 ZKSCAN3Q9BRR0 538 aa23.45■■□□□ 1.34
MAP1LC3B-206ENST00000564844 MAN1B1Q9UKM7 699 aa23.45■■□□□ 1.34
MAP1LC3B-206ENST00000564844 TRDNQ13061 729 aa23.45■■□□□ 1.34
MAP1LC3B-206ENST00000564844 ABCB6Q9NP58 842 aa23.45■■□□□ 1.34
MAP1LC3B-206ENST00000564844 HEG1Q9ULI3 1381 aa23.45■■□□□ 1.34
MAP1LC3B-206ENST00000564844 GPAA1O43292 621 aa23.44■■□□□ 1.34
MAP1LC3B-206ENST00000564844 TXLNAP40222 546 aa23.44■■□□□ 1.34
MAP1LC3B-206ENST00000564844 PTPAQ15257 358 aa23.44■■□□□ 1.34
MAP1LC3B-206ENST00000564844 RAD9BQ6WBX8 426 aa23.44■■□□□ 1.34
MAP1LC3B-206ENST00000564844 TEX13AQ9BXU3 409 aaPredicted RBP23.44■■□□□ 1.34
MAP1LC3B-206ENST00000564844 CEP126Q9P2H0 1117 aa23.44■■□□□ 1.34
MAP1LC3B-206ENST00000564844 A0A0G2JS52 829 aa23.44■■□□□ 1.34
MAP1LC3B-206ENST00000564844 GUCY1A2P33402 732 aa23.44■■□□□ 1.34
MAP1LC3B-206ENST00000564844 RRP12Q5JTH9 1297 aaKnown RBP23.44■■□□□ 1.34
MAP1LC3B-206ENST00000564844 JAKMIP3Q5VZ66 844 aa23.44■■□□□ 1.34
MAP1LC3B-206ENST00000564844 MED15Q96RN5 788 aa23.44■■□□□ 1.34
MAP1LC3B-206ENST00000564844 A1BGP04217 495 aa23.43■■□□□ 1.34
MAP1LC3B-206ENST00000564844 SLC9C2Q5TAH2 1124 aa23.43■■□□□ 1.34
MAP1LC3B-206ENST00000564844 KCNH5Q8NCM2 988 aa23.43■■□□□ 1.34
MAP1LC3B-206ENST00000564844 RGS22Q8NE09 1264 aa23.43■■□□□ 1.34
MAP1LC3B-206ENST00000564844 ACRBPQ8NEB7 543 aa23.43■■□□□ 1.34
MAP1LC3B-206ENST00000564844 IPO4Q8TEX9 1081 aaKnown RBP23.43■■□□□ 1.34
MAP1LC3B-206ENST00000564844 RABGGTAQ92696 567 aa23.43■■□□□ 1.34
MAP1LC3B-206ENST00000564844 RABEP2Q9H5N1 569 aa23.43■■□□□ 1.34
MAP1LC3B-206ENST00000564844 SNRPA1P09661 255 aaKnown RBP23.43■■□□□ 1.34
MAP1LC3B-206ENST00000564844 TRIM29Q14134 588 aa23.43■■□□□ 1.34
MAP1LC3B-206ENST00000564844 UBXN6Q9BZV1 441 aa23.43■■□□□ 1.34
MAP1LC3B-206ENST00000564844 HPSEQ9Y251 543 aa23.43■■□□□ 1.34
MAP1LC3B-206ENST00000564844 IDH1O75874 414 aaKnown RBP23.42■■□□□ 1.34
MAP1LC3B-206ENST00000564844 CDC25AP30304 524 aa23.42■■□□□ 1.34
MAP1LC3B-206ENST00000564844 RBL2Q08999 1139 aa23.42■■□□□ 1.34
MAP1LC3B-206ENST00000564844 ARHGEF25Q86VW2 580 aa23.42■■□□□ 1.34
MAP1LC3B-206ENST00000564844 JMYQ8N9B5 988 aa23.42■■□□□ 1.34
MAP1LC3B-206ENST00000564844 XAGE2Q96GT9 111 aa23.42■■□□□ 1.34
MAP1LC3B-206ENST00000564844 RRP15Q9Y3B9 282 aaKnown RBP23.42■■□□□ 1.34
MAP1LC3B-206ENST00000564844 EYA2O00167 538 aa23.42■■□□□ 1.34
MAP1LC3B-206ENST00000564844 TUBB4AP04350 444 aa23.42■■□□□ 1.34
MAP1LC3B-206ENST00000564844 TBC1D10CQ8IV04 446 aa23.42■■□□□ 1.34
MAP1LC3B-206ENST00000564844 STX10O60499 249 aa23.41■■□□□ 1.34
MAP1LC3B-206ENST00000564844 IARSP41252 1262 aaKnown RBP23.41■■□□□ 1.34
MAP1LC3B-206ENST00000564844 RESP18Q5W5W9 173 aa23.41■■□□□ 1.34
MAP1LC3B-206ENST00000564844 ANKZF1Q9H8Y5 726 aa23.41■■□□□ 1.34
MAP1LC3B-206ENST00000564844 hCG_1642624A0A1W2PR95 340 aa23.41■■□□□ 1.34
MAP1LC3B-206ENST00000564844 CCT6AP40227 531 aaKnown RBP23.41■■□□□ 1.34
MAP1LC3B-206ENST00000564844 NR5A1Q13285 461 aa23.41■■□□□ 1.34
MAP1LC3B-206ENST00000564844 POSTNQ15063 836 aa23.41■■□□□ 1.34
MAP1LC3B-206ENST00000564844 KDM3BQ7LBC6 1761 aa23.41■■□□□ 1.34
MAP1LC3B-206ENST00000564844 CCDC175P0C221 793 aa23.41■■□□□ 1.34
MAP1LC3B-206ENST00000564844 LEKR1Q6ZMV7 388 aa23.41■■□□□ 1.34
MAP1LC3B-206ENST00000564844 CHMP4CQ96CF2 233 aa23.41■■□□□ 1.34
MAP1LC3B-206ENST00000564844 RAI14Q9P0K7 980 aa23.41■■□□□ 1.34
MAP1LC3B-206ENST00000564844 IL15P40933 162 aaPredicted RBP23.4■■□□□ 1.34
MAP1LC3B-206ENST00000564844 MAP3K14Q99558 947 aa23.4■■□□□ 1.34
MAP1LC3B-206ENST00000564844 CUTAO60888 179 aa23.4■■□□□ 1.34
MAP1LC3B-206ENST00000564844 SYNE4Q8N205 404 aa23.4■■□□□ 1.34
MAP1LC3B-206ENST00000564844 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.4■■□□□ 1.34
MAP1LC3B-206ENST00000564844 TFR2Q9UP52 801 aa23.4■■□□□ 1.34
MAP1LC3B-206ENST00000564844 RANBP6O60518 1105 aaKnown RBP23.39■■□□□ 1.34
MAP1LC3B-206ENST00000564844 ZMYND10O75800 440 aa23.39■■□□□ 1.34
MAP1LC3B-206ENST00000564844 CASP7P55210 303 aa23.39■■□□□ 1.34
MAP1LC3B-206ENST00000564844 LRP10Q7Z4F1 713 aa23.39■■□□□ 1.34
MAP1LC3B-206ENST00000564844 SLC35F6Q8N357 371 aa23.39■■□□□ 1.34
MAP1LC3B-206ENST00000564844 IGSF22Q8N9C0 903 aa23.39■■□□□ 1.34
MAP1LC3B-206ENST00000564844 VSNL1P62760 191 aa23.39■■□□□ 1.33
MAP1LC3B-206ENST00000564844 TBX2Q13207 712 aaPredicted RBP23.39■■□□□ 1.33
MAP1LC3B-206ENST00000564844 ANGEL1Q9UNK9 670 aaKnown RBP23.39■■□□□ 1.33
MAP1LC3B-206ENST00000564844 ABCC6O95255 1503 aa23.39■■□□□ 1.33
MAP1LC3B-206ENST00000564844 GOLGA8AA7E2F4 631 aa23.39■■□□□ 1.33
MAP1LC3B-206ENST00000564844 PPFIBP1Q86W92 1011 aa23.39■■□□□ 1.33
MAP1LC3B-206ENST00000564844 MYH15Q9Y2K3 1946 aa23.38■■□□□ 1.33
MAP1LC3B-206ENST00000564844 AKR1B15C9JRZ8 316 aaPredicted RBP23.38■■□□□ 1.33
MAP1LC3B-206ENST00000564844 KIF5CO60282 957 aa23.38■■□□□ 1.33
MAP1LC3B-206ENST00000564844 ACTN2P35609 894 aa23.38■■□□□ 1.33
MAP1LC3B-206ENST00000564844 NCAPH2Q6IBW4 605 aa23.38■■□□□ 1.33
MAP1LC3B-206ENST00000564844 APOA5Q6Q788 366 aa23.38■■□□□ 1.33
MAP1LC3B-206ENST00000564844 SRGAP1Q7Z6B7 1085 aa23.38■■□□□ 1.33
MAP1LC3B-206ENST00000564844 NBPF3Q9H094 633 aa23.38■■□□□ 1.33
MAP1LC3B-206ENST00000564844 PCDHB6Q9Y5E3 794 aa23.38■■□□□ 1.33
MAP1LC3B-206ENST00000564844 CASP14P31944 242 aa23.38■■□□□ 1.33
MAP1LC3B-206ENST00000564844 CABP4P57796 275 aa23.38■■□□□ 1.33
MAP1LC3B-206ENST00000564844 KRI1Q8N9T8 703 aaKnown RBP23.38■■□□□ 1.33
MAP1LC3B-206ENST00000564844 NBPF26B4DH59 902 aa23.37■■□□□ 1.33
MAP1LC3B-206ENST00000564844 FAM193AP78312 1265 aa23.37■■□□□ 1.33
MAP1LC3B-206ENST00000564844 BEND6Q5SZJ8 279 aaPredicted RBP23.37■■□□□ 1.33
MAP1LC3B-206ENST00000564844 NBPF14Q5TI25 921 aa23.37■■□□□ 1.33
MAP1LC3B-206ENST00000564844 NBPF10Q6P3W6 841 aaKnown RBP23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms