RNA–Protein interactions for RNA: ENST00000563976.1

CYLD-206, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

TSL 4

Gene CYLD, Length 547 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-206ENST00000563976 KRT82Q9NSB4 513 aa7.44□□□□□ -1.22
CYLD-206ENST00000563976 RSF1Q96T23 1441 aaPredicted RBP7.44□□□□□ -1.22
CYLD-206ENST00000563976 ANKRD33BA6NCL7 494 aa7.43□□□□□ -1.22
CYLD-206ENST00000563976 RNGTTO60942 597 aaKnown RBP7.43□□□□□ -1.22
CYLD-206ENST00000563976 USP17L7P0C7H9 530 aa7.43□□□□□ -1.22
CYLD-206ENST00000563976 TTLL4Q14679 1199 aa7.43□□□□□ -1.22
CYLD-206ENST00000563976 RASIP1Q5U651 963 aa7.43□□□□□ -1.22
CYLD-206ENST00000563976 SEZ6L2Q6UXD5 910 aa7.43□□□□□ -1.22
CYLD-206ENST00000563976 SND1Q7KZF4 910 aaKnown RBP eCLIP7.43□□□□□ -1.22
CYLD-206ENST00000563976 ZNF765Q7L2R6 523 aa7.43□□□□□ -1.22
CYLD-206ENST00000563976 DTX1Q86Y01 620 aa7.43□□□□□ -1.22
CYLD-206ENST00000563976 ACSBG1Q96GR2 724 aa7.43□□□□□ -1.22
CYLD-206ENST00000563976 SRCIN1Q9C0H9 1055 aa7.43□□□□□ -1.22
CYLD-206ENST00000563976 SYNGAP1Q96PV0 1343 aa7.43□□□□□ -1.22
CYLD-206ENST00000563976 KIF21AQ7Z4S6 1674 aa7.42□□□□□ -1.22
CYLD-206ENST00000563976 PRDM2Q13029 1718 aa7.42□□□□□ -1.22
CYLD-206ENST00000563976 CYP26A1O43174 497 aa7.42□□□□□ -1.22
CYLD-206ENST00000563976 CELA3AP09093 270 aa7.42□□□□□ -1.22
CYLD-206ENST00000563976 FOSL1P15407 271 aa7.42□□□□□ -1.22
CYLD-206ENST00000563976 BMP6P22004 513 aa7.42□□□□□ -1.22
CYLD-206ENST00000563976 ZNF252P-AS1Q0IIN9 211 aa7.42□□□□□ -1.22
CYLD-206ENST00000563976 CDK5R2Q13319 367 aa7.42□□□□□ -1.22
CYLD-206ENST00000563976 METTL22Q9BUU2 404 aaPredicted RBP7.42□□□□□ -1.22
CYLD-206ENST00000563976 EMILIN2Q9BXX0 1053 aa7.42□□□□□ -1.22
CYLD-206ENST00000563976 ATXN3LQ9H3M9 355 aa7.42□□□□□ -1.22
CYLD-206ENST00000563976 LRRC4CQ9HCJ2 640 aa7.42□□□□□ -1.22
CYLD-206ENST00000563976 NESP48681 1621 aa7.41□□□□□ -1.22
CYLD-206ENST00000563976 GIPC1O14908 333 aa7.41□□□□□ -1.22
CYLD-206ENST00000563976 GP2P55259 537 aaKnown RBP7.41□□□□□ -1.22
CYLD-206ENST00000563976 SMYD4Q8IYR2 804 aaPredicted RBP7.41□□□□□ -1.22
CYLD-206ENST00000563976 CEP44Q9C0F1 390 aa7.41□□□□□ -1.22
CYLD-206ENST00000563976 FAM8A1Q9UBU6 413 aa7.41□□□□□ -1.22
CYLD-206ENST00000563976 CSADQ9Y600 493 aa7.41□□□□□ -1.22
CYLD-206ENST00000563976 NEFMP07197 916 aa7.4□□□□□ -1.22
CYLD-206ENST00000563976 ZC3H12AQ5D1E8 599 aaKnown RBP7.4□□□□□ -1.22
CYLD-206ENST00000563976 DUSP27Q5VZP5 1158 aa7.4□□□□□ -1.22
CYLD-206ENST00000563976 PPM1HQ9ULR3 514 aa7.4□□□□□ -1.22
CYLD-206ENST00000563976 TTF2Q9UNY4 1162 aaKnown RBP7.4□□□□□ -1.22
CYLD-206ENST00000563976 OAS3Q9Y6K5 1087 aaKnown RBP7.4□□□□□ -1.22
CYLD-206ENST00000563976 ERCC6Q03468 1493 aa7.39□□□□□ -1.23
CYLD-206ENST00000563976 DCDC2CA8MYV0 355 aa7.39□□□□□ -1.23
CYLD-206ENST00000563976 HNRNPUQ00839 825 aaKnown RBP eCLIP7.39□□□□□ -1.23
CYLD-206ENST00000563976 MSMPQ1L6U9 139 aa7.39□□□□□ -1.23
CYLD-206ENST00000563976 DUSP9Q99956 384 aaKnown RBP7.39□□□□□ -1.23
CYLD-206ENST00000563976 LAMC3Q9Y6N6 1575 aa7.38□□□□□ -1.23
CYLD-206ENST00000563976 PRPF40AO75400 957 aaKnown RBP7.38□□□□□ -1.23
CYLD-206ENST00000563976 WNT11O96014 354 aa7.38□□□□□ -1.23
CYLD-206ENST00000563976 FAM87AP0C7U9 286 aa7.38□□□□□ -1.23
CYLD-206ENST00000563976 EIF4BP23588 611 aaKnown RBP7.38□□□□□ -1.23
CYLD-206ENST00000563976 GNA15P30679 374 aa7.38□□□□□ -1.23
CYLD-206ENST00000563976 CPSF6Q16630 551 aaKnown RBP eCLIP7.38□□□□□ -1.23
CYLD-206ENST00000563976 EAPPQ56P03 285 aaPredicted RBP7.38□□□□□ -1.23
CYLD-206ENST00000563976 PPM1JQ5JR12 505 aa7.38□□□□□ -1.23
CYLD-206ENST00000563976 PCNX4Q63HM2 1172 aa7.38□□□□□ -1.23
CYLD-206ENST00000563976 LLGL2Q6P1M3 1020 aa7.38□□□□□ -1.23
CYLD-206ENST00000563976 ISL2Q96A47 359 aa7.38□□□□□ -1.23
CYLD-206ENST00000563976 SSU72Q9NP77 194 aaKnown RBP7.38□□□□□ -1.23
CYLD-206ENST00000563976 SAMM50Q9Y512 469 aa7.38□□□□□ -1.23
CYLD-206ENST00000563976 OGFOD3Q6PK18 319 aa7.37□□□□□ -1.23
CYLD-206ENST00000563976 C12orf40Q86WS4 652 aa7.37□□□□□ -1.23
CYLD-206ENST00000563976 CACNA2D2Q9NY47 1150 aa7.37□□□□□ -1.23
CYLD-206ENST00000563976 ZC3H7BQ9UGR2 993 aaKnown RBP7.37□□□□□ -1.23
CYLD-206ENST00000563976 PCDHA4Q9UN74 947 aa7.37□□□□□ -1.23
CYLD-206ENST00000563976 LEFTY1O75610 366 aa7.36□□□□□ -1.23
CYLD-206ENST00000563976 TRIM37O94972 964 aa7.36□□□□□ -1.23
CYLD-206ENST00000563976 ERVK-24P63145 666 aa7.36□□□□□ -1.23
CYLD-206ENST00000563976 CYP27A1Q02318 531 aa7.36□□□□□ -1.23
CYLD-206ENST00000563976 DNAJC14Q6Y2X3 702 aaPredicted RBP7.36□□□□□ -1.23
CYLD-206ENST00000563976 RNF214Q8ND24 703 aa7.36□□□□□ -1.23
CYLD-206ENST00000563976 CCDC39Q9UFE4 941 aa7.36□□□□□ -1.23
CYLD-206ENST00000563976 PCOLCE2Q9UKZ9 415 aa7.36□□□□□ -1.23
CYLD-206ENST00000563976 ANGEL1Q9UNK9 670 aaKnown RBP7.36□□□□□ -1.23
CYLD-206ENST00000563976 PTPN11Q06124 597 aaPredicted RBP7.35□□□□□ -1.23
CYLD-206ENST00000563976 UBE3DQ7Z6J8 389 aa7.35□□□□□ -1.23
CYLD-206ENST00000563976 NPAS4Q8IUM7 802 aa7.35□□□□□ -1.23
CYLD-206ENST00000563976 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.35□□□□□ -1.23
CYLD-206ENST00000563976 FAM181AQ8N9Y4 354 aa7.35□□□□□ -1.23
CYLD-206ENST00000563976 FRMD6Q96NE9 622 aa7.35□□□□□ -1.23
CYLD-206ENST00000563976 PICK1Q9NRD5 415 aa7.35□□□□□ -1.23
CYLD-206ENST00000563976 AK5Q9Y6K8 562 aa7.35□□□□□ -1.23
CYLD-206ENST00000563976 THOC2Q8NI27 1593 aaKnown RBP7.34□□□□□ -1.23
CYLD-206ENST00000563976 LRRC14Q15048 493 aa7.34□□□□□ -1.23
CYLD-206ENST00000563976 NFXL1Q6ZNB6 911 aa7.34□□□□□ -1.23
CYLD-206ENST00000563976 ANKRD24Q8TF21 1146 aa7.34□□□□□ -1.23
CYLD-206ENST00000563976 FAM161BQ96MY7 647 aa7.34□□□□□ -1.23
CYLD-206ENST00000563976 KRTAP4-12Q9BQ66 201 aa7.34□□□□□ -1.23
CYLD-206ENST00000563976 PARP2Q9UGN5 583 aa7.34□□□□□ -1.23
CYLD-206ENST00000563976 U3KQE9 123 aa7.34□□□□□ -1.23
CYLD-206ENST00000563976 NTF4P34130 210 aa7.33□□□□□ -1.24
CYLD-206ENST00000563976 IRAK1P51617 712 aa7.33□□□□□ -1.24
CYLD-206ENST00000563976 INPP5AQ14642 412 aa7.33□□□□□ -1.24
CYLD-206ENST00000563976 COL19A1Q14993 1142 aa7.33□□□□□ -1.24
CYLD-206ENST00000563976 CCDC85BQ15834 202 aaPredicted RBP7.33□□□□□ -1.24
CYLD-206ENST00000563976 MAP3K11Q16584 847 aa7.33□□□□□ -1.24
CYLD-206ENST00000563976 CYP27C1Q4G0S4 372 aa7.33□□□□□ -1.24
CYLD-206ENST00000563976 MEI1Q5TIA1 1274 aa7.33□□□□□ -1.24
CYLD-206ENST00000563976 TTBK2Q6IQ55 1244 aa7.33□□□□□ -1.24
CYLD-206ENST00000563976 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.33□□□□□ -1.24
CYLD-206ENST00000563976 TOP6BLQ8N6T0 577 aa7.33□□□□□ -1.24
CYLD-206ENST00000563976 ELMO3Q96BJ8 720 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms