RNA–Protein interactions for RNA: ENST00000563976.1

CYLD-206, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

TSL 4

Gene CYLD, Length 547 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-206ENST00000563976 AEBP2Q6ZN18 517 aaPredicted RBP25.48■■□□□ 1.67
CYLD-206ENST00000563976 CHIC1Q5VXU3 224 aa24.55■■□□□ 1.52
CYLD-206ENST00000563976 PHF23Q9BUL5 403 aaPredicted RBP21.61■■□□□ 1.05
CYLD-206ENST00000563976 SENP3Q9H4L4 574 aaPredicted RBP21.59■■□□□ 1.05
CYLD-206ENST00000563976 FOXD1Q16676 465 aa20.14■□□□□ 0.81
CYLD-206ENST00000563976 PLPPR3Q6T4P5 718 aa19.8■□□□□ 0.76
CYLD-206ENST00000563976 PPP6R1Q9UPN7 881 aa19.18■□□□□ 0.66
CYLD-206ENST00000563976 ADRA2BP18089 450 aa19.15■□□□□ 0.66
CYLD-206ENST00000563976 PIAS4Q8N2W9 510 aaPredicted RBP18.92■□□□□ 0.62
CYLD-206ENST00000563976 POTEDQ86YR6 584 aa18.91■□□□□ 0.62
CYLD-206ENST00000563976 MSH5O43196 834 aa18.61■□□□□ 0.57
CYLD-206ENST00000563976 MAPK8IP2Q13387 824 aaPredicted RBP17.48■□□□□ 0.39
CYLD-206ENST00000563976 PPP4R3CPQ6ZMV5 832 aa17.45■□□□□ 0.38
CYLD-206ENST00000563976 SCAF1Q9H7N4 1312 aaKnown RBP17.42■□□□□ 0.38
CYLD-206ENST00000563976 DMRT2Q9Y5R5 561 aa17.2■□□□□ 0.34
CYLD-206ENST00000563976 CNKSR2Q8WXI2 1034 aa16.98■□□□□ 0.31
CYLD-206ENST00000563976 NCBP3Q53F19 620 aaKnown RBP16.85■□□□□ 0.29
CYLD-206ENST00000563976 KCNA4P22459 653 aa16.76■□□□□ 0.27
CYLD-206ENST00000563976 HOXD11P31277 338 aaPredicted RBP16.72■□□□□ 0.27
CYLD-206ENST00000563976 RNF216Q9NWF9 866 aaPredicted RBP16.71■□□□□ 0.27
CYLD-206ENST00000563976 NPM3O75607 178 aaKnown RBP16.67■□□□□ 0.26
CYLD-206ENST00000563976 DCAF8L1A6NGE4 600 aa16.56■□□□□ 0.24
CYLD-206ENST00000563976 DNAJC5BQ9UF47 199 aa16.08■□□□□ 0.16
CYLD-206ENST00000563976 CACNB1Q02641 598 aaPredicted RBP16■□□□□ 0.15
CYLD-206ENST00000563976 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.98■□□□□ 0.15
CYLD-206ENST00000563976 RNF39Q9H2S5 420 aa15.94■□□□□ 0.14
CYLD-206ENST00000563976 SLC4A1APQ9BWU0 796 aaKnown RBP15.87■□□□□ 0.13
CYLD-206ENST00000563976 SLC4A2P04920 1241 aa15.82■□□□□ 0.12
CYLD-206ENST00000563976 C1QBPQ07021 282 aaKnown RBP15.7■□□□□ 0.1
CYLD-206ENST00000563976 U3KPZ7 1027 aaPredicted RBP15.69■□□□□ 0.1
CYLD-206ENST00000563976 FOXD4L1Q9NU39 408 aa15.45■□□□□ 0.06
CYLD-206ENST00000563976 ZBTB22O15209 634 aa15.43■□□□□ 0.06
CYLD-206ENST00000563976 SPINK5Q9NQ38 1064 aaPredicted RBP15.38■□□□□ 0.05
CYLD-206ENST00000563976 MYCNP04198 464 aaPredicted RBP15.37■□□□□ 0.05
CYLD-206ENST00000563976 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.31■□□□□ 0.04
CYLD-206ENST00000563976 CAPN15O75808 1086 aa15.31■□□□□ 0.04
CYLD-206ENST00000563976 HNRNPUL2Q1KMD3 747 aaKnown RBP15.31■□□□□ 0.04
CYLD-206ENST00000563976 SAMD1Q6SPF0 538 aaPredicted RBP15.27■□□□□ 0.04
CYLD-206ENST00000563976 APLP2Q06481 763 aa15.2■□□□□ 0.02
CYLD-206ENST00000563976 TRHP20396 242 aaPredicted RBP15.19■□□□□ 0.02
CYLD-206ENST00000563976 EHMT2Q96KQ7 1210 aa15.17■□□□□ 0.02
CYLD-206ENST00000563976 DSG3P32926 999 aa15.09■□□□□ 0.01
CYLD-206ENST00000563976 ZNF219Q9P2Y4 722 aaPredicted RBP15.09■□□□□ 0.01
CYLD-206ENST00000563976 CSRNP3Q8WYN3 585 aa15.08■□□□□ 0
CYLD-206ENST00000563976 ATF5Q9Y2D1 282 aaPredicted RBP15.07■□□□□ 0
CYLD-206ENST00000563976 ABCB7O75027 752 aa15.04■□□□□ -0
CYLD-206ENST00000563976 ATXN8OSP0DMR3 200 aa14.87□□□□□ -0.03
CYLD-206ENST00000563976 POLA2Q14181 598 aa14.86□□□□□ -0.03
CYLD-206ENST00000563976 POTEHQ6S545 545 aa14.7□□□□□ -0.06
CYLD-206ENST00000563976 ZBTB12Q9Y330 459 aaPredicted RBP14.49□□□□□ -0.09
CYLD-206ENST00000563976 OSCARQ8IYS5 282 aa14.38□□□□□ -0.11
CYLD-206ENST00000563976 FBLN2P98095 1184 aa14.37□□□□□ -0.11
CYLD-206ENST00000563976 MKRN4PQ13434 485 aaPredicted RBP14.37□□□□□ -0.11
CYLD-206ENST00000563976 RBM42Q9BTD8 480 aaKnown RBP14.32□□□□□ -0.12
CYLD-206ENST00000563976 AKT1S1Q96B36 256 aa14.11□□□□□ -0.15
CYLD-206ENST00000563976 SPDYE2BA6NHP3 402 aa14.1□□□□□ -0.15
CYLD-206ENST00000563976 SPDYE6P0CI01 402 aa14.1□□□□□ -0.15
CYLD-206ENST00000563976 SPDYE2Q495Y8 402 aa14.1□□□□□ -0.15
CYLD-206ENST00000563976 ZNF692Q9BU19 519 aaPredicted RBP14.06□□□□□ -0.16
CYLD-206ENST00000563976 REM2Q8IYK8 340 aaPredicted RBP14.02□□□□□ -0.17
CYLD-206ENST00000563976 SSUH2Q9Y2M2 353 aa13.98□□□□□ -0.17
CYLD-206ENST00000563976 CHRDL2Q6WN34 429 aa13.9□□□□□ -0.18
CYLD-206ENST00000563976 SPDYE4A6NLX3 237 aa13.89□□□□□ -0.19
CYLD-206ENST00000563976 PITPNM1O00562 1244 aa13.88□□□□□ -0.19
CYLD-206ENST00000563976 PABPN1Q86U42 306 aaKnown RBP eCLIP13.88□□□□□ -0.19
CYLD-206ENST00000563976 CLEC11AQ9Y240 323 aa13.81□□□□□ -0.2
CYLD-206ENST00000563976 SPDYE1Q8NFV5 336 aaPredicted RBP13.77□□□□□ -0.21
CYLD-206ENST00000563976 PIP4P2Q8N4L2 257 aa13.68□□□□□ -0.22
CYLD-206ENST00000563976 FKBP8Q14318 412 aa13.67□□□□□ -0.22
CYLD-206ENST00000563976 FXR2P51116 673 aaKnown RBP eCLIP13.63□□□□□ -0.23
CYLD-206ENST00000563976 PRR29P0C7W0 189 aa13.59□□□□□ -0.23
CYLD-206ENST00000563976 PROM2Q8N271 834 aa13.56□□□□□ -0.24
CYLD-206ENST00000563976 PRKAR2AP13861 404 aaKnown RBP13.53□□□□□ -0.24
CYLD-206ENST00000563976 CHADLQ6NUI6 762 aa13.52□□□□□ -0.25
CYLD-206ENST00000563976 STAG3Q9UJ98 1225 aa13.51□□□□□ -0.25
CYLD-206ENST00000563976 SP7Q8TDD2 431 aaPredicted RBP13.43□□□□□ -0.26
CYLD-206ENST00000563976 CREBZFQ9NS37 354 aa13.36□□□□□ -0.27
CYLD-206ENST00000563976 HAX1O00165 279 aa13.33□□□□□ -0.28
CYLD-206ENST00000563976 FARP1Q9Y4F1 1045 aaPredicted RBP13.29□□□□□ -0.28
CYLD-206ENST00000563976 EVX2Q03828 476 aa13.24□□□□□ -0.29
CYLD-206ENST00000563976 MIER1Q8N108 512 aa13.21□□□□□ -0.29
CYLD-206ENST00000563976 C19orf67A6NJJ6 358 aa13.18□□□□□ -0.3
CYLD-206ENST00000563976 MNX1P50219 401 aaPredicted RBP13.18□□□□□ -0.3
CYLD-206ENST00000563976 PLCD3Q8N3E9 789 aa13.17□□□□□ -0.3
CYLD-206ENST00000563976 FBXO3Q9UK99 471 aa13.17□□□□□ -0.3
CYLD-206ENST00000563976 CD44P16070 742 aaKnown RBP13.13□□□□□ -0.31
CYLD-206ENST00000563976 PLEKHG5O94827 1062 aa13.11□□□□□ -0.31
CYLD-206ENST00000563976 NPM1P06748 294 aaKnown RBP eCLIP13.09□□□□□ -0.31
CYLD-206ENST00000563976 VASPP50552 380 aaPredicted RBP13.05□□□□□ -0.32
CYLD-206ENST00000563976 ZRANB1Q9UGI0 708 aa13.02□□□□□ -0.33
CYLD-206ENST00000563976 PAK3O75914 559 aaPredicted RBP12.95□□□□□ -0.34
CYLD-206ENST00000563976 TSPYL2Q9H2G4 693 aaPredicted RBP12.95□□□□□ -0.34
CYLD-206ENST00000563976 ZBTB47Q9UFB7 747 aaPredicted RBP12.95□□□□□ -0.34
CYLD-206ENST00000563976 RASEFQ8IZ41 740 aa12.93□□□□□ -0.34
CYLD-206ENST00000563976 KLHL34Q8N239 644 aa12.92□□□□□ -0.34
CYLD-206ENST00000563976 GABBR2O75899 941 aa12.91□□□□□ -0.34
CYLD-206ENST00000563976 ZNF579Q8NAF0 562 aaKnown RBP12.9□□□□□ -0.34
CYLD-206ENST00000563976 NUBP1P53384 320 aa12.89□□□□□ -0.35
CYLD-206ENST00000563976 PHF12Q96QT6 1004 aa12.89□□□□□ -0.35
CYLD-206ENST00000563976 IFNLR1Q8IU57 520 aaPredicted RBP12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms