RNA–Protein interactions for RNA: ENST00000563109.1

RAB40C-207, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 710 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-207ENST00000563109 SLC4A4Q9Y6R1 1079 aa22.58■■□□□ 1.21
RAB40C-207ENST00000563109 RPAP1Q9BWH6 1393 aaPredicted RBP22.58■■□□□ 1.21
RAB40C-207ENST00000563109 FLT1P17948 1338 aa22.57■■□□□ 1.2
RAB40C-207ENST00000563109 MYH1P12882 1939 aa22.57■■□□□ 1.2
RAB40C-207ENST00000563109 MAPKAPK5Q8IW41 473 aa22.57■■□□□ 1.2
RAB40C-207ENST00000563109 FAM151AQ8WW52 585 aa22.57■■□□□ 1.2
RAB40C-207ENST00000563109 FAM198AQ9UFP1 575 aa22.57■■□□□ 1.2
RAB40C-207ENST00000563109 CNTNAP1P78357 1384 aa22.57■■□□□ 1.2
RAB40C-207ENST00000563109 DDX60LQ5H9U9 1706 aaKnown RBP22.57■■□□□ 1.2
RAB40C-207ENST00000563109 CCDC171Q6TFL3 1326 aa22.57■■□□□ 1.2
RAB40C-207ENST00000563109 COL2A1P02458 1487 aaPredicted RBP22.56■■□□□ 1.2
RAB40C-207ENST00000563109 FSTL1Q12841 308 aa22.56■■□□□ 1.2
RAB40C-207ENST00000563109 CCDC129Q6ZRS4 1044 aa22.56■■□□□ 1.2
RAB40C-207ENST00000563109 OSBPL5Q9H0X9 879 aaPredicted RBP22.56■■□□□ 1.2
RAB40C-207ENST00000563109 DDX4Q9NQI0 724 aaKnown RBP22.56■■□□□ 1.2
RAB40C-207ENST00000563109 ZSCAN29Q8IWY8 852 aaPredicted RBP22.55■■□□□ 1.2
RAB40C-207ENST00000563109 SDR42E1Q8WUS8 393 aa22.55■■□□□ 1.2
RAB40C-207ENST00000563109 TMEM39BQ9GZU3 492 aa22.55■■□□□ 1.2
RAB40C-207ENST00000563109 ATP8A2Q9NTI2 1148 aa22.55■■□□□ 1.2
RAB40C-207ENST00000563109 TRPM7Q96QT4 1865 aa22.55■■□□□ 1.2
RAB40C-207ENST00000563109 APPP05067 770 aa22.54■■□□□ 1.2
RAB40C-207ENST00000563109 NF2P35240 595 aa22.54■■□□□ 1.2
RAB40C-207ENST00000563109 HOOK2Q96ED9 719 aa22.54■■□□□ 1.2
RAB40C-207ENST00000563109 CDCA5Q96FF9 252 aa22.54■■□□□ 1.2
RAB40C-207ENST00000563109 NACAP1Q9BZK3 213 aa22.54■■□□□ 1.2
RAB40C-207ENST00000563109 BAZ2AQ9UIF9 1905 aaKnown RBP22.53■■□□□ 1.2
RAB40C-207ENST00000563109 PRKAB2O43741 272 aa22.53■■□□□ 1.2
RAB40C-207ENST00000563109 ZNF589Q86UQ0 364 aaPredicted RBP22.53■■□□□ 1.2
RAB40C-207ENST00000563109 AMOTL1Q8IY63 956 aa22.53■■□□□ 1.2
RAB40C-207ENST00000563109 LAMB1P07942 1786 aa22.53■■□□□ 1.2
RAB40C-207ENST00000563109 TRAF5O00463 557 aa22.52■■□□□ 1.2
RAB40C-207ENST00000563109 HLA-DOAP06340 250 aa22.52■■□□□ 1.2
RAB40C-207ENST00000563109 SUPT20HL1Q3ZLR7 823 aa22.52■■□□□ 1.2
RAB40C-207ENST00000563109 GIMAP6Q6P9H5 292 aa22.52■■□□□ 1.2
RAB40C-207ENST00000563109 DHX36Q9H2U1 1008 aaKnown RBP22.52■■□□□ 1.2
RAB40C-207ENST00000563109 DCP1AQ9NPI6 582 aaPredicted RBP22.52■■□□□ 1.2
RAB40C-207ENST00000563109 SAP30BPQ9UHR5 308 aaKnown RBP22.52■■□□□ 1.2
RAB40C-207ENST00000563109 ATRNL1Q5VV63 1379 aa22.51■■□□□ 1.19
RAB40C-207ENST00000563109 PATL2C9JE40 543 aaKnown RBP22.51■■□□□ 1.19
RAB40C-207ENST00000563109 TDO2P48775 406 aa22.51■■□□□ 1.19
RAB40C-207ENST00000563109 ZFPM1Q8IX07 1006 aa22.51■■□□□ 1.19
RAB40C-207ENST00000563109 CSRNP1Q96S65 589 aa22.51■■□□□ 1.19
RAB40C-207ENST00000563109 MCM9Q9NXL9 1143 aa22.51■■□□□ 1.19
RAB40C-207ENST00000563109 GSG1L2A8MUP6 293 aa22.5■■□□□ 1.19
RAB40C-207ENST00000563109 SGSM2O43147 1006 aa22.5■■□□□ 1.19
RAB40C-207ENST00000563109 ITGBL1O95965 494 aaPredicted RBP22.5■■□□□ 1.19
RAB40C-207ENST00000563109 POLR3DP05423 398 aaPredicted RBP22.5■■□□□ 1.19
RAB40C-207ENST00000563109 PRAMEF18Q5VWM3 479 aa22.5■■□□□ 1.19
RAB40C-207ENST00000563109 TEPSINQ96N21 525 aa22.5■■□□□ 1.19
RAB40C-207ENST00000563109 ESYT1Q9BSJ8 1104 aa22.5■■□□□ 1.19
RAB40C-207ENST00000563109 ZNF408Q9H9D4 720 aa22.5■■□□□ 1.19
RAB40C-207ENST00000563109 ARPP21Q9UBL0 812 aaPredicted RBP22.5■■□□□ 1.19
RAB40C-207ENST00000563109 NBPF12Q5TAG4 269 aaPredicted RBP22.49■■□□□ 1.19
RAB40C-207ENST00000563109 TTC6Q86TZ1 520 aa22.49■■□□□ 1.19
RAB40C-207ENST00000563109 TRIM34Q9BYJ4 488 aa22.49■■□□□ 1.19
RAB40C-207ENST00000563109 NAPBQ9H115 298 aa22.49■■□□□ 1.19
RAB40C-207ENST00000563109 MKRN1Q9UHC7 482 aaKnown RBP22.49■■□□□ 1.19
RAB40C-207ENST00000563109 DDTLA6NHG4 134 aaPredicted RBP22.48■■□□□ 1.19
RAB40C-207ENST00000563109 HSPD1P10809 573 aaKnown RBP22.48■■□□□ 1.19
RAB40C-207ENST00000563109 DCAF15Q66K64 600 aa22.48■■□□□ 1.19
RAB40C-207ENST00000563109 DLK2Q6UY11 383 aa22.48■■□□□ 1.19
RAB40C-207ENST00000563109 KIAA1211Q6ZU35 1233 aa22.48■■□□□ 1.19
RAB40C-207ENST00000563109 SH3BP5LQ7L8J4 393 aa22.48■■□□□ 1.19
RAB40C-207ENST00000563109 IFNL3Q8IZI9 196 aa22.48■■□□□ 1.19
RAB40C-207ENST00000563109 EPB41L4AQ9HCS5 686 aaPredicted RBP22.48■■□□□ 1.19
RAB40C-207ENST00000563109 PALD1Q9ULE6 856 aa22.48■■□□□ 1.19
RAB40C-207ENST00000563109 PASKQ96RG2 1323 aa22.48■■□□□ 1.19
RAB40C-207ENST00000563109 PAPPA2Q9BXP8 1791 aa22.48■■□□□ 1.19
RAB40C-207ENST00000563109 CELF2O95319 508 aaKnown RBP22.47■■□□□ 1.19
RAB40C-207ENST00000563109 SLC4A8Q2Y0W8 1093 aa22.47■■□□□ 1.19
RAB40C-207ENST00000563109 VPS53Q5VIR6 699 aa22.47■■□□□ 1.19
RAB40C-207ENST00000563109 CDAN1Q8IWY9 1227 aa22.47■■□□□ 1.19
RAB40C-207ENST00000563109 IL25Q9H293 177 aa22.47■■□□□ 1.19
RAB40C-207ENST00000563109 PI4KBQ9UBF8 816 aa22.47■■□□□ 1.19
RAB40C-207ENST00000563109 SIPA1L1O43166 1804 aa22.47■■□□□ 1.19
RAB40C-207ENST00000563109 SSC5DA1L4H1 1573 aa22.46■■□□□ 1.19
RAB40C-207ENST00000563109 CRACR2BQ8N4Y2 399 aaPredicted RBP22.46■■□□□ 1.19
RAB40C-207ENST00000563109 DSCC1Q9BVC3 393 aa22.46■■□□□ 1.19
RAB40C-207ENST00000563109 ZMYM6O95789 1325 aa22.46■■□□□ 1.19
RAB40C-207ENST00000563109 LAMA4Q16363 1823 aa22.45■■□□□ 1.19
RAB40C-207ENST00000563109 USP17L12C9JPN9 530 aa22.45■■□□□ 1.18
RAB40C-207ENST00000563109 USP17L21D6R901 530 aa22.45■■□□□ 1.18
RAB40C-207ENST00000563109 PPP1R12BO60237 982 aaPredicted RBP22.45■■□□□ 1.18
RAB40C-207ENST00000563109 FMR1Q06787 632 aaKnown RBP eCLIP22.45■■□□□ 1.18
RAB40C-207ENST00000563109 TTLL12Q14166 644 aaPredicted RBP22.45■■□□□ 1.18
RAB40C-207ENST00000563109 ALX1Q15699 326 aa22.45■■□□□ 1.18
RAB40C-207ENST00000563109 MYH8P13535 1937 aa22.44■■□□□ 1.18
RAB40C-207ENST00000563109 SBK1Q52WX2 424 aa22.44■■□□□ 1.18
RAB40C-207ENST00000563109 CTR9Q6PD62 1173 aa22.44■■□□□ 1.18
RAB40C-207ENST00000563109 EHD4Q9H223 541 aa22.44■■□□□ 1.18
RAB40C-207ENST00000563109 ANO2Q9NQ90 1003 aa22.44■■□□□ 1.18
RAB40C-207ENST00000563109 HERC5Q9UII4 1024 aaKnown RBP22.44■■□□□ 1.18
RAB40C-207ENST00000563109 MINDY4BA8MYZ0 360 aa22.43■■□□□ 1.18
RAB40C-207ENST00000563109 FOXP2O15409 715 aa22.43■■□□□ 1.18
RAB40C-207ENST00000563109 CYP2D6P10635 497 aa22.43■■□□□ 1.18
RAB40C-207ENST00000563109 FKBP1BP68106 108 aa22.43■■□□□ 1.18
RAB40C-207ENST00000563109 ARMC9Q7Z3E5 817 aa22.43■■□□□ 1.18
RAB40C-207ENST00000563109 FOXP4Q8IVH2 680 aaPredicted RBP22.43■■□□□ 1.18
RAB40C-207ENST00000563109 C2orf69Q8N8R5 385 aa22.43■■□□□ 1.18
RAB40C-207ENST00000563109 ZNF341Q9BYN7 854 aa22.43■■□□□ 1.18
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