RNA–Protein interactions for RNA: ENST00000562836.5

CDH1-205, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 2,759 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-205ENST00000562836 GCC1Q96CN9 775 aa10.61□□□□□ -0.71
CDH1-205ENST00000562836 SCYL1Q96KG9 808 aa10.61□□□□□ -0.71
CDH1-205ENST00000562836 CEP63Q96MT8 703 aa10.61□□□□□ -0.71
CDH1-205ENST00000562836 UROC1Q96N76 676 aa10.61□□□□□ -0.71
CDH1-205ENST00000562836 IWS1Q96ST2 819 aa10.61□□□□□ -0.71
CDH1-205ENST00000562836 MPHOSPH6Q99547 160 aaKnown RBP10.61□□□□□ -0.71
CDH1-205ENST00000562836 MAP3K14Q99558 947 aa10.61□□□□□ -0.71
CDH1-205ENST00000562836 BATF3Q9NR55 127 aa10.61□□□□□ -0.71
CDH1-205ENST00000562836 ZNF777Q9ULD5 760 aaPredicted RBP10.61□□□□□ -0.71
CDH1-205ENST00000562836 NESP48681 1621 aa10.61□□□□□ -0.71
CDH1-205ENST00000562836 SLU7O95391 586 aaKnown RBP10.6□□□□□ -0.71
CDH1-205ENST00000562836 HOXD12P35452 270 aa10.6□□□□□ -0.71
CDH1-205ENST00000562836 PAK2Q13177 524 aa10.6□□□□□ -0.71
CDH1-205ENST00000562836 BICD2Q8TD16 824 aa10.6□□□□□ -0.71
CDH1-205ENST00000562836 ANKRD49Q8WVL7 239 aa10.6□□□□□ -0.71
CDH1-205ENST00000562836 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.6□□□□□ -0.71
CDH1-205ENST00000562836 TBC1D31Q96DN5 1066 aa10.6□□□□□ -0.71
CDH1-205ENST00000562836 DNAI2Q9GZS0 605 aa10.6□□□□□ -0.71
CDH1-205ENST00000562836 HDAC9Q9UKV0 1011 aa10.6□□□□□ -0.71
CDH1-205ENST00000562836 KDM1AO60341 852 aa10.6□□□□□ -0.71
CDH1-205ENST00000562836 NEMFO60524 1076 aa10.6□□□□□ -0.71
CDH1-205ENST00000562836 FERP16591 822 aa10.6□□□□□ -0.71
CDH1-205ENST00000562836 BNIP1Q12981 228 aa10.6□□□□□ -0.71
CDH1-205ENST00000562836 IMMTQ16891 758 aaKnown RBP10.6□□□□□ -0.71
CDH1-205ENST00000562836 CCDC144BQ3MJ40 725 aa10.6□□□□□ -0.71
CDH1-205ENST00000562836 CAPN12Q6ZSI9 719 aa10.6□□□□□ -0.71
CDH1-205ENST00000562836 LRRC49Q8IUZ0 686 aa10.6□□□□□ -0.71
CDH1-205ENST00000562836 USP6NLQ92738 828 aa10.6□□□□□ -0.71
CDH1-205ENST00000562836 RPGRQ92834 1020 aaKnown RBP10.6□□□□□ -0.71
CDH1-205ENST00000562836 ZMAT2Q96NC0 199 aaKnown RBP10.6□□□□□ -0.71
CDH1-205ENST00000562836 TSC22D3Q99576 134 aa10.6□□□□□ -0.71
CDH1-205ENST00000562836 VPS18Q9P253 973 aa10.6□□□□□ -0.71
CDH1-205ENST00000562836 SCINQ9Y6U3 715 aa10.6□□□□□ -0.71
CDH1-205ENST00000562836 NDUFAB1O14561 156 aa10.6□□□□□ -0.71
CDH1-205ENST00000562836 CASTP20810 708 aaKnown RBP10.6□□□□□ -0.71
CDH1-205ENST00000562836 EIF4G2P78344 907 aaKnown RBP eCLIP10.6□□□□□ -0.71
CDH1-205ENST00000562836 CTAG1AP78358 180 aa10.6□□□□□ -0.71
CDH1-205ENST00000562836 TPD52L1Q16890 204 aaPredicted RBP10.6□□□□□ -0.71
CDH1-205ENST00000562836 TTC39BQ5VTQ0 682 aaPredicted RBP10.6□□□□□ -0.71
CDH1-205ENST00000562836 UNC5DQ6UXZ4 953 aa10.6□□□□□ -0.71
CDH1-205ENST00000562836 CKAP2LQ8IYA6 745 aa10.6□□□□□ -0.71
CDH1-205ENST00000562836 RABGGTAQ92696 567 aa10.6□□□□□ -0.71
CDH1-205ENST00000562836 NR1H4Q96RI1 486 aaPredicted RBP10.6□□□□□ -0.71
CDH1-205ENST00000562836 PREBQ9HCU5 417 aa10.6□□□□□ -0.71
CDH1-205ENST00000562836 ARIH1Q9Y4X5 557 aaPredicted RBP10.6□□□□□ -0.71
CDH1-205ENST00000562836 NCOA3Q9Y6Q9 1424 aa10.59□□□□□ -0.71
CDH1-205ENST00000562836 HOXA2O43364 376 aa10.59□□□□□ -0.71
CDH1-205ENST00000562836 MYBL1P10243 752 aa10.59□□□□□ -0.71
CDH1-205ENST00000562836 YY1P25490 414 aa10.59□□□□□ -0.71
CDH1-205ENST00000562836 SLC16A2P36021 539 aa10.59□□□□□ -0.71
CDH1-205ENST00000562836 OXCT1P55809 520 aa10.59□□□□□ -0.71
CDH1-205ENST00000562836 ARHGAP29Q52LW3 1261 aa10.59□□□□□ -0.71
CDH1-205ENST00000562836 MRRFQ96E11 262 aaKnown RBP10.59□□□□□ -0.71
CDH1-205ENST00000562836 C1orf74Q96LT6 269 aa10.59□□□□□ -0.71
CDH1-205ENST00000562836 USP26Q9BXU7 913 aa10.59□□□□□ -0.71
CDH1-205ENST00000562836 VCX3BQ9H321 246 aa10.59□□□□□ -0.71
CDH1-205ENST00000562836 AMOTL2Q9Y2J4 779 aa10.59□□□□□ -0.71
CDH1-205ENST00000562836 CEP85LQ5SZL2 805 aa10.59□□□□□ -0.71
CDH1-205ENST00000562836 TAOK1Q7L7X3 1001 aa10.59□□□□□ -0.71
CDH1-205ENST00000562836 POTEDQ86YR6 584 aa10.59□□□□□ -0.71
CDH1-205ENST00000562836 ZBTB8BQ8NAP8 495 aaPredicted RBP10.59□□□□□ -0.71
CDH1-205ENST00000562836 TMX3Q96JJ7 454 aa10.59□□□□□ -0.71
CDH1-205ENST00000562836 CENPHQ9H3R5 247 aa10.59□□□□□ -0.71
CDH1-205ENST00000562836 MYO1AQ9UBC5 1043 aa10.59□□□□□ -0.71
CDH1-205ENST00000562836 ATP1B4Q9UN42 357 aaPredicted RBP10.59□□□□□ -0.71
CDH1-205ENST00000562836 CARD8Q9Y2G2 431 aa10.59□□□□□ -0.71
CDH1-205ENST00000562836 SNAPC4Q5SXM2 1469 aa10.58□□□□□ -0.72
CDH1-205ENST00000562836 KDRP35968 1356 aa10.58□□□□□ -0.72
CDH1-205ENST00000562836 PRPF40AO75400 957 aaKnown RBP10.58□□□□□ -0.72
CDH1-205ENST00000562836 VIMP08670 466 aaKnown RBP10.58□□□□□ -0.72
CDH1-205ENST00000562836 NFKBIAP25963 317 aa10.58□□□□□ -0.72
CDH1-205ENST00000562836 POTEEQ6S8J3 1075 aa10.58□□□□□ -0.72
CDH1-205ENST00000562836 GPR101Q96P66 508 aaPredicted RBP10.58□□□□□ -0.72
CDH1-205ENST00000562836 BEGAINQ9BUH8 593 aa10.58□□□□□ -0.72
CDH1-205ENST00000562836 PCDH18Q9HCL0 1135 aa10.58□□□□□ -0.72
CDH1-205ENST00000562836 KMT5AQ9NQR1 393 aa10.58□□□□□ -0.72
CDH1-205ENST00000562836 FAM169AQ9Y6X4 670 aa10.58□□□□□ -0.72
CDH1-205ENST00000562836 H3BQF6 201 aa10.58□□□□□ -0.72
CDH1-205ENST00000562836 LGR5O75473 907 aa10.58□□□□□ -0.72
CDH1-205ENST00000562836 SMTNP53814 917 aa10.58□□□□□ -0.72
CDH1-205ENST00000562836 TBX4P57082 545 aa10.58□□□□□ -0.72
CDH1-205ENST00000562836 NUCB1Q02818 461 aa10.58□□□□□ -0.72
CDH1-205ENST00000562836 CCDC93Q567U6 631 aa10.58□□□□□ -0.72
CDH1-205ENST00000562836 CREB3L3Q68CJ9 461 aa10.58□□□□□ -0.72
CDH1-205ENST00000562836 PTF1AQ7RTS3 328 aa10.58□□□□□ -0.72
CDH1-205ENST00000562836 TNIP2Q8NFZ5 429 aa10.58□□□□□ -0.72
CDH1-205ENST00000562836 CERKQ8TCT0 537 aa10.58□□□□□ -0.72
CDH1-205ENST00000562836 NELL1Q92832 810 aa10.58□□□□□ -0.72
CDH1-205ENST00000562836 ATP6V0A4Q9HBG4 840 aa10.58□□□□□ -0.72
CDH1-205ENST00000562836 PHF24Q9UPV7 400 aa10.58□□□□□ -0.72
CDH1-205ENST00000562836 HECW1Q76N89 1606 aa10.57□□□□□ -0.72
CDH1-205ENST00000562836 CTTNBP2Q8WZ74 1663 aa10.57□□□□□ -0.72
CDH1-205ENST00000562836 ERICH2A1L162 156 aa10.57□□□□□ -0.72
CDH1-205ENST00000562836 BTBD11A6QL63 1104 aa10.57□□□□□ -0.72
CDH1-205ENST00000562836 PRSS47A8MTI9 375 aa10.57□□□□□ -0.72
CDH1-205ENST00000562836 PDLIM1O00151 329 aa10.57□□□□□ -0.72
CDH1-205ENST00000562836 PDGFRBP09619 1106 aa10.57□□□□□ -0.72
CDH1-205ENST00000562836 CAMK2BQ13554 666 aa10.57□□□□□ -0.72
CDH1-205ENST00000562836 CRY1Q16526 586 aa10.57□□□□□ -0.72
CDH1-205ENST00000562836 MSL1Q68DK7 614 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms