RNA–Protein interactions for RNA: ENST00000561954.1

IFT140-205, Transcript of intraflagellar transport 140, humanhuman

TSL 3

Gene IFT140, Length 826 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-205ENST00000561954 FMR1Q06787 632 aaKnown RBP eCLIP16.84■□□□□ 0.29
IFT140-205ENST00000561954 TTLL12Q14166 644 aaPredicted RBP16.84■□□□□ 0.29
IFT140-205ENST00000561954 CST9Q5W186 159 aa16.84■□□□□ 0.29
IFT140-205ENST00000561954 ARMC9Q7Z3E5 817 aa16.84■□□□□ 0.29
IFT140-205ENST00000561954 CSRNP1Q96S65 589 aa16.84■□□□□ 0.29
IFT140-205ENST00000561954 DHX36Q9H2U1 1008 aaKnown RBP16.84■□□□□ 0.29
IFT140-205ENST00000561954 DDX4Q9NQI0 724 aaKnown RBP16.84■□□□□ 0.29
IFT140-205ENST00000561954 TLL2Q9Y6L7 1015 aa16.84■□□□□ 0.29
IFT140-205ENST00000561954 UNCXA6NJT0 531 aa16.83■□□□□ 0.28
IFT140-205ENST00000561954 GNAT2P19087 354 aa16.83■□□□□ 0.28
IFT140-205ENST00000561954 DDX60LQ5H9U9 1706 aaKnown RBP16.83■□□□□ 0.28
IFT140-205ENST00000561954 NBPF12Q5TAG4 269 aaPredicted RBP16.83■□□□□ 0.28
IFT140-205ENST00000561954 PRAMEF18Q5VWM3 479 aa16.83■□□□□ 0.28
IFT140-205ENST00000561954 DLK2Q6UY11 383 aa16.83■□□□□ 0.28
IFT140-205ENST00000561954 LCORLQ8N3X6 602 aa16.83■□□□□ 0.28
IFT140-205ENST00000561954 TGFBRAP1Q8WUH2 860 aa16.83■□□□□ 0.28
IFT140-205ENST00000561954 HHIPL1Q96JK4 782 aa16.83■□□□□ 0.28
IFT140-205ENST00000561954 NAV1Q8NEY1 1877 aa16.82■□□□□ 0.28
IFT140-205ENST00000561954 HLA-DOAP06340 250 aa16.82■□□□□ 0.28
IFT140-205ENST00000561954 GSPT1P15170 499 aaKnown RBP16.82■□□□□ 0.28
IFT140-205ENST00000561954 IREB2P48200 963 aaKnown RBP16.82■□□□□ 0.28
IFT140-205ENST00000561954 ZMYM1Q5SVZ6 1142 aa16.82■□□□□ 0.28
IFT140-205ENST00000561954 SAPCD2Q86UD0 394 aa16.82■□□□□ 0.28
IFT140-205ENST00000561954 MAPKAPK5Q8IW41 473 aa16.82■□□□□ 0.28
IFT140-205ENST00000561954 AMOTL1Q8IY63 956 aa16.82■□□□□ 0.28
IFT140-205ENST00000561954 ARMT1Q9H993 441 aa16.82■□□□□ 0.28
IFT140-205ENST00000561954 DIAPH3Q9NSV4 1193 aa16.82■□□□□ 0.28
IFT140-205ENST00000561954 RASSF10A6NK89 507 aa16.81■□□□□ 0.28
IFT140-205ENST00000561954 HUNKP57058 714 aa16.81■□□□□ 0.28
IFT140-205ENST00000561954 MAP3K11Q16584 847 aa16.81■□□□□ 0.28
IFT140-205ENST00000561954 PUS7LQ9H0K6 701 aaKnown RBP16.81■□□□□ 0.28
IFT140-205ENST00000561954 HELLSQ9NRZ9 838 aa16.81■□□□□ 0.28
IFT140-205ENST00000561954 ATP8A2Q9NTI2 1148 aa16.81■□□□□ 0.28
IFT140-205ENST00000561954 POLR2AP24928 1970 aaKnown RBP16.8■□□□□ 0.28
IFT140-205ENST00000561954 GPAA1O43292 621 aa16.8■□□□□ 0.28
IFT140-205ENST00000561954 MFAP1P55081 439 aaKnown RBP16.8■□□□□ 0.28
IFT140-205ENST00000561954 CDAN1Q8IWY9 1227 aa16.8■□□□□ 0.28
IFT140-205ENST00000561954 OSBP2Q969R2 916 aa16.8■□□□□ 0.28
IFT140-205ENST00000561954 TRIM34Q9BYJ4 488 aa16.8■□□□□ 0.28
IFT140-205ENST00000561954 ZNF341Q9BYN7 854 aa16.8■□□□□ 0.28
IFT140-205ENST00000561954 HERC5Q9UII4 1024 aaKnown RBP16.8■□□□□ 0.28
IFT140-205ENST00000561954 TAOK2Q9UL54 1235 aa16.8■□□□□ 0.28
IFT140-205ENST00000561954 ANGEL1Q9UNK9 670 aaKnown RBP16.8■□□□□ 0.28
IFT140-205ENST00000561954 SLC4A4Q9Y6R1 1079 aa16.8■□□□□ 0.28
IFT140-205ENST00000561954 AK9Q5TCS8 1911 aa16.8■□□□□ 0.28
IFT140-205ENST00000561954 CDK5RAP2Q96SN8 1893 aa16.8■□□□□ 0.28
IFT140-205ENST00000561954 M0R2C6 588 aa16.79■□□□□ 0.28
IFT140-205ENST00000561954 CHGBP05060 677 aa16.79■□□□□ 0.28
IFT140-205ENST00000561954 SDSP20132 328 aa16.79■□□□□ 0.28
IFT140-205ENST00000561954 SLFNL1Q499Z3 407 aa16.79■□□□□ 0.28
IFT140-205ENST00000561954 BMP2KLQ5H9B9 411 aa16.79■□□□□ 0.28
IFT140-205ENST00000561954 GIMAP6Q6P9H5 292 aa16.79■□□□□ 0.28
IFT140-205ENST00000561954 PI4KBQ9UBF8 816 aa16.79■□□□□ 0.28
IFT140-205ENST00000561954 RAD50Q92878 1312 aa16.78■□□□□ 0.28
IFT140-205ENST00000561954 DDTLA6NHG4 134 aaPredicted RBP16.78■□□□□ 0.28
IFT140-205ENST00000561954 ECE1P42892 770 aa16.78■□□□□ 0.28
IFT140-205ENST00000561954 PRKG1Q13976 671 aa16.78■□□□□ 0.28
IFT140-205ENST00000561954 SH3BP5LQ7L8J4 393 aa16.78■□□□□ 0.28
IFT140-205ENST00000561954 TTC6Q86TZ1 520 aa16.78■□□□□ 0.28
IFT140-205ENST00000561954 ZFPM1Q8IX07 1006 aa16.78■□□□□ 0.28
IFT140-205ENST00000561954 ANKRD13AQ8IZ07 590 aa16.78■□□□□ 0.28
IFT140-205ENST00000561954 SDR42E1Q8WUS8 393 aa16.78■□□□□ 0.28
IFT140-205ENST00000561954 STRBPQ96SI9 672 aaKnown RBP16.78■□□□□ 0.28
IFT140-205ENST00000561954 NACAP1Q9BZK3 213 aa16.78■□□□□ 0.28
IFT140-205ENST00000561954 EHD4Q9H223 541 aa16.78■□□□□ 0.28
IFT140-205ENST00000561954 DCP1AQ9NPI6 582 aaPredicted RBP16.78■□□□□ 0.28
IFT140-205ENST00000561954 ARPP21Q9UBL0 812 aaPredicted RBP16.78■□□□□ 0.28
IFT140-205ENST00000561954 CSADQ9Y600 493 aa16.78■□□□□ 0.28
IFT140-205ENST00000561954 TBC1D12O60347 775 aa16.77■□□□□ 0.28
IFT140-205ENST00000561954 DEFB115Q30KQ5 88 aa16.77■□□□□ 0.28
IFT140-205ENST00000561954 MCMDC2Q4G0Z9 681 aa16.77■□□□□ 0.28
IFT140-205ENST00000561954 RGMBQ6NW40 437 aa16.77■□□□□ 0.28
IFT140-205ENST00000561954 PAXIP1Q6ZW49 1069 aaPredicted RBP16.77■□□□□ 0.28
IFT140-205ENST00000561954 CRACR2BQ8N4Y2 399 aaPredicted RBP16.77■□□□□ 0.28
IFT140-205ENST00000561954 WRNIP1Q96S55 665 aa16.77■□□□□ 0.28
IFT140-205ENST00000561954 MCM9Q9NXL9 1143 aa16.77■□□□□ 0.28
IFT140-205ENST00000561954 MKRN1Q9UHC7 482 aaKnown RBP16.77■□□□□ 0.28
IFT140-205ENST00000561954 SAP30BPQ9UHR5 308 aaKnown RBP16.77■□□□□ 0.28
IFT140-205ENST00000561954 CCDC171Q6TFL3 1326 aa16.76■□□□□ 0.27
IFT140-205ENST00000561954 A0A0D9SFI3 127 aa16.76■□□□□ 0.27
IFT140-205ENST00000561954 NMIQ13287 307 aaPredicted RBP16.76■□□□□ 0.27
IFT140-205ENST00000561954 LDLRAD1Q5T700 205 aa16.76■□□□□ 0.27
IFT140-205ENST00000561954 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.76■□□□□ 0.27
IFT140-205ENST00000561954 RUFY2Q8WXA3 655 aa16.76■□□□□ 0.27
IFT140-205ENST00000561954 CCDC102AQ96A19 550 aa16.76■□□□□ 0.27
IFT140-205ENST00000561954 KLRG1Q96E93 195 aa16.76■□□□□ 0.27
IFT140-205ENST00000561954 FAM227BQ96M60 508 aa16.76■□□□□ 0.27
IFT140-205ENST00000561954 PALD1Q9ULE6 856 aa16.76■□□□□ 0.27
IFT140-205ENST00000561954 THSD7BQ9C0I4 1608 aa16.76■□□□□ 0.27
IFT140-205ENST00000561954 OTOFQ9HC10 1997 aa16.76■□□□□ 0.27
IFT140-205ENST00000561954 UBE2Q2LH0YL09 131 aa16.75■□□□□ 0.27
IFT140-205ENST00000561954 USP2O75604 605 aaPredicted RBP16.75■□□□□ 0.27
IFT140-205ENST00000561954 POLR3DP05423 398 aaPredicted RBP16.75■□□□□ 0.27
IFT140-205ENST00000561954 TDO2P48775 406 aa16.75■□□□□ 0.27
IFT140-205ENST00000561954 ZNF157P51786 506 aaPredicted RBP16.75■□□□□ 0.27
IFT140-205ENST00000561954 HTRA3P83110 453 aa16.75■□□□□ 0.27
IFT140-205ENST00000561954 MAP3K10Q02779 954 aa16.75■□□□□ 0.27
IFT140-205ENST00000561954 MOB2Q70IA6 237 aa16.75■□□□□ 0.27
IFT140-205ENST00000561954 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.75■□□□□ 0.27
IFT140-205ENST00000561954 SERPINB13Q9UIV8 391 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms