RNA–Protein interactions for RNA: ENST00000561728.1

AC010542.3-202, humanhuman

APPRIS P1 TSL 2 BASIC

Gene AC010542.3, Length 701 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC010542.3-202ENST00000561728 MFSD14AQ96MC6 490 aa12.45□□□□□ -0.42
AC010542.3-202ENST00000561728 MSRAQ9UJ68 235 aa12.45□□□□□ -0.42
AC010542.3-202ENST00000561728 CYP2B6P20813 491 aa12.44□□□□□ -0.42
AC010542.3-202ENST00000561728 CCND3P30281 292 aaPredicted RBP12.44□□□□□ -0.42
AC010542.3-202ENST00000561728 EIF4A1P60842 406 aaKnown RBP12.44□□□□□ -0.42
AC010542.3-202ENST00000561728 FPGSQ05932 587 aa12.44□□□□□ -0.42
AC010542.3-202ENST00000561728 CACNB2Q08289 660 aaPredicted RBP12.44□□□□□ -0.42
AC010542.3-202ENST00000561728 FAM110CQ1W6H9 321 aa12.44□□□□□ -0.42
AC010542.3-202ENST00000561728 DCAF15Q66K64 600 aa12.44□□□□□ -0.42
AC010542.3-202ENST00000561728 SH3RF1Q7Z6J0 888 aa12.44□□□□□ -0.42
AC010542.3-202ENST00000561728 GJD2Q9UKL4 321 aa12.44□□□□□ -0.42
AC010542.3-202ENST00000561728 RPAP1Q9BWH6 1393 aaPredicted RBP12.43□□□□□ -0.42
AC010542.3-202ENST00000561728 CHD7Q9P2D1 2997 aa12.43□□□□□ -0.42
AC010542.3-202ENST00000561728 ANXA1P04083 346 aa12.43□□□□□ -0.42
AC010542.3-202ENST00000561728 ZKSCAN1P17029 563 aaPredicted RBP12.43□□□□□ -0.42
AC010542.3-202ENST00000561728 EIF4G2P78344 907 aaKnown RBP eCLIP12.43□□□□□ -0.42
AC010542.3-202ENST00000561728 RAB30Q15771 203 aa12.43□□□□□ -0.42
AC010542.3-202ENST00000561728 TRIM60Q495X7 471 aa12.43□□□□□ -0.42
AC010542.3-202ENST00000561728 GADL1Q6ZQY3 521 aa12.43□□□□□ -0.42
AC010542.3-202ENST00000561728 TRMT44Q8IYL2 757 aaKnown RBP12.43□□□□□ -0.42
AC010542.3-202ENST00000561728 PRSS33Q8NF86 280 aa12.43□□□□□ -0.42
AC010542.3-202ENST00000561728 PNISRQ8TF01 805 aaKnown RBP12.43□□□□□ -0.42
AC010542.3-202ENST00000561728 XAGE3Q8WTP9 111 aa12.43□□□□□ -0.42
AC010542.3-202ENST00000561728 HLA-CQ95604 372 aa12.43□□□□□ -0.42
AC010542.3-202ENST00000561728 PHACTR3Q96KR7 559 aa12.43□□□□□ -0.42
AC010542.3-202ENST00000561728 CCDC85AQ96PX6 553 aaPredicted RBP12.43□□□□□ -0.42
AC010542.3-202ENST00000561728 ZNF341Q9BYN7 854 aa12.43□□□□□ -0.42
AC010542.3-202ENST00000561728 SLC28A3Q9HAS3 691 aa12.43□□□□□ -0.42
AC010542.3-202ENST00000561728 BSDC1Q9NW68 430 aaPredicted RBP12.43□□□□□ -0.42
AC010542.3-202ENST00000561728 SLC45A1Q9Y2W3 748 aa12.43□□□□□ -0.42
AC010542.3-202ENST00000561728 AK9Q5TCS8 1911 aa12.43□□□□□ -0.42
AC010542.3-202ENST00000561728 GRXCR1A8MXD5 290 aa12.42□□□□□ -0.42
AC010542.3-202ENST00000561728 DNM1LO00429 736 aa12.42□□□□□ -0.42
AC010542.3-202ENST00000561728 CXCL11O14625 94 aa12.42□□□□□ -0.42
AC010542.3-202ENST00000561728 GTPBP6O43824 516 aaPredicted RBP12.42□□□□□ -0.42
AC010542.3-202ENST00000561728 EIF2S2P20042 333 aaKnown RBP12.42□□□□□ -0.42
AC010542.3-202ENST00000561728 INPP5BP32019 993 aa12.42□□□□□ -0.42
AC010542.3-202ENST00000561728 PDIA6Q15084 440 aa12.42□□□□□ -0.42
AC010542.3-202ENST00000561728 PROSER3Q2NL68 480 aa12.42□□□□□ -0.42
AC010542.3-202ENST00000561728 SLC39A5Q6ZMH5 540 aa12.42□□□□□ -0.42
AC010542.3-202ENST00000561728 ANKS1AQ92625 1134 aa12.42□□□□□ -0.42
AC010542.3-202ENST00000561728 PRRC2BQ5JSZ5 2229 aaKnown RBP12.42□□□□□ -0.42
AC010542.3-202ENST00000561728 CFAP47Q6ZTR5 3102 aa12.42□□□□□ -0.42
AC010542.3-202ENST00000561728 RIF1Q5UIP0 2472 aaKnown RBP12.42□□□□□ -0.42
AC010542.3-202ENST00000561728 DCXO43602 365 aa12.41□□□□□ -0.42
AC010542.3-202ENST00000561728 RAG1P15918 1043 aa12.41□□□□□ -0.42
AC010542.3-202ENST00000561728 VASPP50552 380 aaPredicted RBP12.41□□□□□ -0.42
AC010542.3-202ENST00000561728 HFE2Q6ZVN8 426 aa12.41□□□□□ -0.42
AC010542.3-202ENST00000561728 CNTNAP3BQ96NU0 1288 aa12.41□□□□□ -0.42
AC010542.3-202ENST00000561728 PRRX2Q99811 253 aa12.41□□□□□ -0.42
AC010542.3-202ENST00000561728 CNTNAP3Q9BZ76 1288 aa12.41□□□□□ -0.42
AC010542.3-202ENST00000561728 PANK3Q9H999 370 aa12.41□□□□□ -0.42
AC010542.3-202ENST00000561728 CD209Q9NNX6 404 aa12.41□□□□□ -0.42
AC010542.3-202ENST00000561728 MINPP1Q9UNW1 487 aa12.41□□□□□ -0.42
AC010542.3-202ENST00000561728 LEMD3Q9Y2U8 911 aa12.41□□□□□ -0.42
AC010542.3-202ENST00000561728 MYBBP1AQ9BQG0 1328 aaKnown RBP12.4□□□□□ -0.42
AC010542.3-202ENST00000561728 PRKAR2BP31323 418 aa12.4□□□□□ -0.42
AC010542.3-202ENST00000561728 CDC5LQ99459 802 aaKnown RBP12.4□□□□□ -0.42
AC010542.3-202ENST00000561728 NKX2-4Q9H2Z4 354 aa12.4□□□□□ -0.42
AC010542.3-202ENST00000561728 TACC3Q9Y6A5 838 aa12.4□□□□□ -0.42
AC010542.3-202ENST00000561728 CHD6Q8TD26 2715 aa12.4□□□□□ -0.42
AC010542.3-202ENST00000561728 FAM186AA6NE01 2351 aa12.4□□□□□ -0.43
AC010542.3-202ENST00000561728 MED19A0JLT2 244 aaPredicted RBP12.39□□□□□ -0.43
AC010542.3-202ENST00000561728 ATP5J2-PTCD1G3V325 749 aa12.39□□□□□ -0.43
AC010542.3-202ENST00000561728 KLRK1P26718 216 aa12.39□□□□□ -0.43
AC010542.3-202ENST00000561728 FKBP1AP62942 108 aaKnown RBP12.39□□□□□ -0.43
AC010542.3-202ENST00000561728 ACAP1Q15027 740 aa12.39□□□□□ -0.43
AC010542.3-202ENST00000561728 DZIP1LQ8IYY4 767 aaKnown RBP12.39□□□□□ -0.43
AC010542.3-202ENST00000561728 LPAR1Q92633 364 aa12.39□□□□□ -0.43
AC010542.3-202ENST00000561728 NUDT12Q9BQG2 462 aa12.39□□□□□ -0.43
AC010542.3-202ENST00000561728 ISCA1Q9BUE6 129 aa12.39□□□□□ -0.43
AC010542.3-202ENST00000561728 FRMPD3Q5JV73 1810 aa12.39□□□□□ -0.43
AC010542.3-202ENST00000561728 A0A0G2JLL6 359 aaPredicted RBP12.38□□□□□ -0.43
AC010542.3-202ENST00000561728 HTATSF1O43719 755 aaKnown RBP12.38□□□□□ -0.43
AC010542.3-202ENST00000561728 MSCO60682 206 aa12.38□□□□□ -0.43
AC010542.3-202ENST00000561728 XRCC5P13010 732 aaKnown RBP12.38□□□□□ -0.43
AC010542.3-202ENST00000561728 CCDC174Q6PII3 467 aa12.38□□□□□ -0.43
AC010542.3-202ENST00000561728 MIGA2Q7L4E1 593 aa12.38□□□□□ -0.43
AC010542.3-202ENST00000561728 PRRT2Q7Z6L0 340 aaPredicted RBP12.38□□□□□ -0.43
AC010542.3-202ENST00000561728 SOCS4Q8WXH5 440 aa12.38□□□□□ -0.43
AC010542.3-202ENST00000561728 FAM86C1Q9NVL1 165 aa12.38□□□□□ -0.43
AC010542.3-202ENST00000561728 SERPINA10Q9UK55 444 aa12.38□□□□□ -0.43
AC010542.3-202ENST00000561728 PNMA3Q9UL41 463 aa12.38□□□□□ -0.43
AC010542.3-202ENST00000561728 ACACBO00763 2458 aa12.38□□□□□ -0.43
AC010542.3-202ENST00000561728 RLFQ13129 1914 aa12.38□□□□□ -0.43
AC010542.3-202ENST00000561728 NCOR2Q9Y618 2525 aa12.38□□□□□ -0.43
AC010542.3-202ENST00000561728 CACNA1HO95180 2353 aa12.37□□□□□ -0.43
AC010542.3-202ENST00000561728 KBTBD13C9JR72 458 aa12.37□□□□□ -0.43
AC010542.3-202ENST00000561728 CLTBP09497 229 aa12.37□□□□□ -0.43
AC010542.3-202ENST00000561728 KCNJ4P48050 445 aa12.37□□□□□ -0.43
AC010542.3-202ENST00000561728 SNX17Q15036 470 aa12.37□□□□□ -0.43
AC010542.3-202ENST00000561728 FAM178BQ8IXR5 827 aa12.37□□□□□ -0.43
AC010542.3-202ENST00000561728 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.37□□□□□ -0.434e-6■□□□□ 8
AC010542.3-202ENST00000561728 DDX20Q9UHI6 824 aaKnown RBP12.37□□□□□ -0.43
AC010542.3-202ENST00000561728 ANKRD11Q6UB99 2663 aaPredicted RBP12.37□□□□□ -0.43
AC010542.3-202ENST00000561728 TLE2Q04725 743 aa12.36□□□□□ -0.43
AC010542.3-202ENST00000561728 GJC2Q5T442 439 aaPredicted RBP12.36□□□□□ -0.43
AC010542.3-202ENST00000561728 TMOD2Q9NZR1 351 aa12.36□□□□□ -0.43
AC010542.3-202ENST00000561728 JAG2Q9Y219 1238 aa12.36□□□□□ -0.43
AC010542.3-202ENST00000561728 MTCH2Q9Y6C9 303 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms