RNA–Protein interactions for RNA: ENST00000561206.1

USP8-216, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 2

Gene USP8, Length 556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-216ENST00000561206 SPACA3Q8IXA5 215 aa7.52□□□□□ -1.21
USP8-216ENST00000561206 HEXIM2Q96MH2 286 aaKnown RBP7.52□□□□□ -1.21
USP8-216ENST00000561206 DISC1Q9NRI5 854 aa7.52□□□□□ -1.21
USP8-216ENST00000561206 FOXD3Q9UJU5 478 aaPredicted RBP7.52□□□□□ -1.21
USP8-216ENST00000561206 TMEM253P0C7T8 217 aa7.51□□□□□ -1.21
USP8-216ENST00000561206 EHHADHQ08426 723 aa7.51□□□□□ -1.21
USP8-216ENST00000561206 PDE3AQ14432 1141 aa7.51□□□□□ -1.21
USP8-216ENST00000561206 SPRED3Q2MJR0 410 aa7.51□□□□□ -1.21
USP8-216ENST00000561206 C19orf73Q9NVV2 129 aa7.51□□□□□ -1.21
USP8-216ENST00000561206 ID3Q02535 119 aa7.5□□□□□ -1.21
USP8-216ENST00000561206 ATG14Q6ZNE5 492 aa7.5□□□□□ -1.21
USP8-216ENST00000561206 ZFYVE28Q9HCC9 887 aa7.5□□□□□ -1.21
USP8-216ENST00000561206 PCOLCE2Q9UKZ9 415 aa7.5□□□□□ -1.21
USP8-216ENST00000561206 A0A1W2PP55 124 aa7.49□□□□□ -1.21
USP8-216ENST00000561206 ITIH2P19823 946 aa7.49□□□□□ -1.21
USP8-216ENST00000561206 GDNFP39905 211 aa7.49□□□□□ -1.21
USP8-216ENST00000561206 EIF1AXP47813 144 aaKnown RBP7.49□□□□□ -1.21
USP8-216ENST00000561206 KIF4BQ2VIQ3 1234 aa7.49□□□□□ -1.21
USP8-216ENST00000561206 ZNF576Q9H609 170 aa7.49□□□□□ -1.21
USP8-216ENST00000561206 NSUN3Q9H649 340 aaKnown RBP7.49□□□□□ -1.21
USP8-216ENST00000561206 POLIQ9UNA4 740 aa7.49□□□□□ -1.21
USP8-216ENST00000561206 PITPNM2Q9BZ72 1349 aa7.49□□□□□ -1.21
USP8-216ENST00000561206 SLFN14P0C7P3 912 aa7.48□□□□□ -1.21
USP8-216ENST00000561206 SRFP11831 508 aa7.48□□□□□ -1.21
USP8-216ENST00000561206 ITPKAP23677 461 aa7.48□□□□□ -1.21
USP8-216ENST00000561206 CLCN7P51798 805 aa7.48□□□□□ -1.21
USP8-216ENST00000561206 ALKBH2Q6NS38 261 aa7.48□□□□□ -1.21
USP8-216ENST00000561206 WDR89Q96FK6 387 aaPredicted RBP7.48□□□□□ -1.21
USP8-216ENST00000561206 LIN7BQ9HAP6 207 aa7.48□□□□□ -1.21
USP8-216ENST00000561206 PARD6AQ9NPB6 346 aa7.48□□□□□ -1.21
USP8-216ENST00000561206 FOXD2O60548 495 aaPredicted RBP7.47□□□□□ -1.21
USP8-216ENST00000561206 USP5P45974 858 aa7.47□□□□□ -1.21
USP8-216ENST00000561206 SRPK2P78362 688 aaKnown RBP7.47□□□□□ -1.21
USP8-216ENST00000561206 TTLL4Q14679 1199 aa7.47□□□□□ -1.21
USP8-216ENST00000561206 NKPD1Q17RQ9 610 aa7.47□□□□□ -1.21
USP8-216ENST00000561206 TMEM164Q5U3C3 297 aa7.47□□□□□ -1.21
USP8-216ENST00000561206 GALNT12Q8IXK2 581 aa7.47□□□□□ -1.21
USP8-216ENST00000561206 CCDC86Q9H6F5 360 aaKnown RBP7.47□□□□□ -1.21
USP8-216ENST00000561206 SLAIN2Q9P270 581 aa7.47□□□□□ -1.21
USP8-216ENST00000561206 SMG5Q9UPR3 1016 aaKnown RBP7.47□□□□□ -1.21
USP8-216ENST00000561206 TCAF2A6NFQ2 919 aa7.46□□□□□ -1.22
USP8-216ENST00000561206 LIG1P18858 919 aa7.46□□□□□ -1.22
USP8-216ENST00000561206 LINC00310P59036 64 aa7.46□□□□□ -1.22
USP8-216ENST00000561206 KRTAP10-2P60368 255 aa7.46□□□□□ -1.22
USP8-216ENST00000561206 TOP6BLQ8N6T0 577 aa7.46□□□□□ -1.22
USP8-216ENST00000561206 DIRC2Q96SL1 478 aa7.46□□□□□ -1.22
USP8-216ENST00000561206 KRT82Q9NSB4 513 aa7.46□□□□□ -1.22
USP8-216ENST00000561206 GTF2IRD1Q9UHL9 959 aa7.46□□□□□ -1.22
USP8-216ENST00000561206 ETV2O00321 342 aaPredicted RBP7.45□□□□□ -1.22
USP8-216ENST00000561206 ZNF862O60290 1169 aa7.45□□□□□ -1.22
USP8-216ENST00000561206 ATG7O95352 703 aa7.45□□□□□ -1.22
USP8-216ENST00000561206 PTPN12Q05209 780 aaKnown RBP7.45□□□□□ -1.22
USP8-216ENST00000561206 NEFMP07197 916 aa7.44□□□□□ -1.22
USP8-216ENST00000561206 NPR3P17342 541 aa7.44□□□□□ -1.22
USP8-216ENST00000561206 MPSTP25325 297 aa7.44□□□□□ -1.22
USP8-216ENST00000561206 EPB41L4BQ9H329 900 aa7.44□□□□□ -1.22
USP8-216ENST00000561206 A0A0G2JLL6 359 aaPredicted RBP7.43□□□□□ -1.22
USP8-216ENST00000561206 NUAK1O60285 661 aa7.43□□□□□ -1.22
USP8-216ENST00000561206 KIAA0319Q5VV43 1072 aa7.43□□□□□ -1.22
USP8-216ENST00000561206 DCP1AQ9NPI6 582 aaPredicted RBP7.43□□□□□ -1.22
USP8-216ENST00000561206 HCLS1P14317 486 aaPredicted RBP7.42□□□□□ -1.22
USP8-216ENST00000561206 RPS26P11Q5JNZ5 115 aaPredicted RBP7.42□□□□□ -1.22
USP8-216ENST00000561206 GJD3Q8N144 294 aa7.42□□□□□ -1.22
USP8-216ENST00000561206 ISL2Q96A47 359 aa7.42□□□□□ -1.22
USP8-216ENST00000561206 SLC26A8Q96RN1 970 aa7.42□□□□□ -1.22
USP8-216ENST00000561206 RNGTTO60942 597 aaKnown RBP7.41□□□□□ -1.22
USP8-216ENST00000561206 POLR3DP05423 398 aaPredicted RBP7.41□□□□□ -1.22
USP8-216ENST00000561206 SYN1P17600 705 aa7.41□□□□□ -1.22
USP8-216ENST00000561206 ATP2B4P23634 1241 aa7.41□□□□□ -1.22
USP8-216ENST00000561206 HNRNPUQ00839 825 aaKnown RBP eCLIP7.41□□□□□ -1.22
USP8-216ENST00000561206 ADAMTS20P59510 1910 aa7.4□□□□□ -1.22
USP8-216ENST00000561206 CCDC120Q96HB5 630 aa7.4□□□□□ -1.22
USP8-216ENST00000561206 KCNC2Q96PR1 638 aa7.4□□□□□ -1.22
USP8-216ENST00000561206 CARS2Q9HA77 564 aaKnown RBP7.4□□□□□ -1.22
USP8-216ENST00000561206 NPAS4Q8IUM7 802 aa7.39□□□□□ -1.23
USP8-216ENST00000561206 RNF214Q8ND24 703 aa7.39□□□□□ -1.23
USP8-216ENST00000561206 KCNK12Q9HB15 430 aa7.39□□□□□ -1.23
USP8-216ENST00000561206 SEMA3GQ9NS98 782 aa7.39□□□□□ -1.23
USP8-216ENST00000561206 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.38□□□□□ -1.23
USP8-216ENST00000561206 RTEL1Q9NZ71 1219 aa7.38□□□□□ -1.23
USP8-216ENST00000561206 FZD6O60353 706 aa7.37□□□□□ -1.23
USP8-216ENST00000561206 GSTP1P09211 210 aaKnown RBP7.37□□□□□ -1.23
USP8-216ENST00000561206 ERVK-24P63145 666 aa7.37□□□□□ -1.23
USP8-216ENST00000561206 NFKB2Q00653 900 aa7.37□□□□□ -1.23
USP8-216ENST00000561206 GGNQ86UU5 652 aa7.37□□□□□ -1.23
USP8-216ENST00000561206 CXorf38Q8TB03 319 aa7.37□□□□□ -1.23
USP8-216ENST00000561206 IRF2BPLQ9H1B7 796 aa7.37□□□□□ -1.23
USP8-216ENST00000561206 ZCCHC4Q9H5U6 513 aa7.37□□□□□ -1.23
USP8-216ENST00000561206 PRDM10Q9NQV6 1147 aa7.37□□□□□ -1.23
USP8-216ENST00000561206 ZNF777Q9ULD5 760 aaPredicted RBP7.37□□□□□ -1.23
USP8-216ENST00000561206 ZC3H12AQ5D1E8 599 aaKnown RBP7.36□□□□□ -1.23
USP8-216ENST00000561206 KCNN1Q92952 543 aa7.36□□□□□ -1.23
USP8-216ENST00000561206 GNAT3A8MTJ3 354 aa7.35□□□□□ -1.23
USP8-216ENST00000561206 NFIXQ14938 502 aa7.35□□□□□ -1.23
USP8-216ENST00000561206 PRPF40BQ6NWY9 871 aaKnown RBP7.35□□□□□ -1.23
USP8-216ENST00000561206 C22orf34Q6ZV56 151 aa7.35□□□□□ -1.23
USP8-216ENST00000561206 PDZD3Q86UT5 571 aa7.35□□□□□ -1.23
USP8-216ENST00000561206 MAPK8IP1Q9UQF2 711 aa7.35□□□□□ -1.23
USP8-216ENST00000561206 EOMESO95936 686 aa7.34□□□□□ -1.23
USP8-216ENST00000561206 ABHD4Q8TB40 342 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 135.4 ms