RNA–Protein interactions for RNA: ENST00000560945.1

SNX22-205, Transcript of sorting nexin 22, humanhuman

TSL 1 (best)

Gene SNX22, Length 1,807 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX22-205ENST00000560945 AKNAD1Q5T1N1 836 aa26.45■■□□□ 1.82
SNX22-205ENST00000560945 ALDH8A1Q9H2A2 487 aaPredicted RBP26.45■■□□□ 1.82
SNX22-205ENST00000560945 ZNRF3Q9ULT6 936 aa26.45■■□□□ 1.82
SNX22-205ENST00000560945 DTNBO60941 627 aa26.44■■□□□ 1.82
SNX22-205ENST00000560945 RALYLQ86SE5 291 aaKnown RBP26.44■■□□□ 1.82
SNX22-205ENST00000560945 STAG1Q8WVM7 1258 aa26.44■■□□□ 1.82
SNX22-205ENST00000560945 TEKT1Q969V4 418 aa26.44■■□□□ 1.82
SNX22-205ENST00000560945 MCM9Q9NXL9 1143 aa26.44■■□□□ 1.82
SNX22-205ENST00000560945 ANAPC4Q9UJX5 808 aa26.44■■□□□ 1.82
SNX22-205ENST00000560945 ZBTB12Q9Y330 459 aaPredicted RBP26.44■■□□□ 1.82
SNX22-205ENST00000560945 ST3GAL1Q11201 340 aa26.44■■□□□ 1.82
SNX22-205ENST00000560945 CUL4AQ13619 759 aa26.44■■□□□ 1.82
SNX22-205ENST00000560945 ME3Q16798 604 aa26.44■■□□□ 1.82
SNX22-205ENST00000560945 APOBEC3HQ6NTF7 200 aaKnown RBP26.44■■□□□ 1.82
SNX22-205ENST00000560945 SAP30BPQ9UHR5 308 aaKnown RBP26.44■■□□□ 1.82
SNX22-205ENST00000560945 PRC1O43663 620 aa26.43■■□□□ 1.82
SNX22-205ENST00000560945 RSBN1LQ6PCB5 846 aaPredicted RBP26.43■■□□□ 1.82
SNX22-205ENST00000560945 HHIPL2Q6UWX4 724 aa26.43■■□□□ 1.82
SNX22-205ENST00000560945 IL27Q8NEV9 243 aa26.43■■□□□ 1.82
SNX22-205ENST00000560945 BRF1Q92994 677 aa26.43■■□□□ 1.82
SNX22-205ENST00000560945 PSME4Q14997 1843 aa26.42■■□□□ 1.82
SNX22-205ENST00000560945 VIL1P09327 827 aaKnown RBP26.42■■□□□ 1.82
SNX22-205ENST00000560945 RRP12Q5JTH9 1297 aaKnown RBP26.42■■□□□ 1.82
SNX22-205ENST00000560945 DDIT3P35638 169 aa26.42■■□□□ 1.82
SNX22-205ENST00000560945 CXCL9Q07325 125 aa26.42■■□□□ 1.82
SNX22-205ENST00000560945 MFSD6Q6ZSS7 791 aa26.42■■□□□ 1.82
SNX22-205ENST00000560945 NECAB1Q8N987 351 aa26.42■■□□□ 1.82
SNX22-205ENST00000560945 CDK5RAP2Q96SN8 1893 aa26.41■■□□□ 1.82
SNX22-205ENST00000560945 MCM5P33992 734 aa26.41■■□□□ 1.82
SNX22-205ENST00000560945 TRDNQ13061 729 aa26.41■■□□□ 1.82
SNX22-205ENST00000560945 CDC42EP5Q6NZY7 148 aa26.41■■□□□ 1.82
SNX22-205ENST00000560945 TOMM22Q9NS69 142 aa26.41■■□□□ 1.82
SNX22-205ENST00000560945 USP40Q9NVE5 1235 aa26.41■■□□□ 1.82
SNX22-205ENST00000560945 ARPP21Q9UBL0 812 aaPredicted RBP26.41■■□□□ 1.82
SNX22-205ENST00000560945 FLT1P17948 1338 aa26.41■■□□□ 1.82
SNX22-205ENST00000560945 LTBP3Q9NS15 1303 aa26.41■■□□□ 1.82
SNX22-205ENST00000560945 PLCG2P16885 1265 aa26.4■■□□□ 1.82
SNX22-205ENST00000560945 APOBRQ0VD83 1088 aa26.4■■□□□ 1.82
SNX22-205ENST00000560945 SBK1Q52WX2 424 aa26.4■■□□□ 1.82
SNX22-205ENST00000560945 GMLQ99445 158 aa26.4■■□□□ 1.82
SNX22-205ENST00000560945 AGXT2Q9BYV1 514 aa26.4■■□□□ 1.82
SNX22-205ENST00000560945 DDX4Q9NQI0 724 aaKnown RBP26.4■■□□□ 1.82
SNX22-205ENST00000560945 SRCAPQ6ZRS2 3230 aa26.4■■□□□ 1.82
SNX22-205ENST00000560945 NAV1Q8NEY1 1877 aa26.39■■□□□ 1.82
SNX22-205ENST00000560945 KDM4AO75164 1064 aa26.39■■□□□ 1.82
SNX22-205ENST00000560945 PRDM1O75626 825 aa26.39■■□□□ 1.82
SNX22-205ENST00000560945 RBM5P52756 815 aaKnown RBP eCLIP26.39■■□□□ 1.82
SNX22-205ENST00000560945 FGD1P98174 961 aa26.39■■□□□ 1.82
SNX22-205ENST00000560945 PICALMQ13492 652 aa26.39■■□□□ 1.82
SNX22-205ENST00000560945 ANKRD1Q15327 319 aa26.39■■□□□ 1.82
SNX22-205ENST00000560945 ZDHHC15Q96MV8 337 aa26.39■■□□□ 1.82
SNX22-205ENST00000560945 LAMB1P07942 1786 aa26.39■■□□□ 1.82
SNX22-205ENST00000560945 WDHD1O75717 1129 aaPredicted RBP26.39■■□□□ 1.81
SNX22-205ENST00000560945 STK3Q13188 491 aa26.39■■□□□ 1.81
SNX22-205ENST00000560945 C12orf60Q5U649 245 aa26.39■■□□□ 1.81
SNX22-205ENST00000560945 CERS3Q8IU89 383 aa26.39■■□□□ 1.81
SNX22-205ENST00000560945 CCDC83Q8IWF9 413 aa26.39■■□□□ 1.81
SNX22-205ENST00000560945 JDP2Q8WYK2 163 aa26.39■■□□□ 1.81
SNX22-205ENST00000560945 ZSWIM5Q9P217 1185 aa26.39■■□□□ 1.81
SNX22-205ENST00000560945 DYNLL2Q96FJ2 89 aa26.38■■□□□ 1.81
SNX22-205ENST00000560945 DDX60LQ5H9U9 1706 aaKnown RBP26.38■■□□□ 1.81
SNX22-205ENST00000560945 PLCD1P51178 756 aa26.37■■□□□ 1.81
SNX22-205ENST00000560945 CACNB3P54284 484 aa26.37■■□□□ 1.81
SNX22-205ENST00000560945 MRIQ9BWK5 157 aa26.37■■□□□ 1.81
SNX22-205ENST00000560945 SENP2Q9HC62 589 aa26.37■■□□□ 1.81
SNX22-205ENST00000560945 HDLBPQ00341 1268 aaKnown RBP26.37■■□□□ 1.81
SNX22-205ENST00000560945 CFAP100Q494V2 611 aa26.37■■□□□ 1.81
SNX22-205ENST00000560945 ZSCAN31Q96LW9 406 aaPredicted RBP26.37■■□□□ 1.81
SNX22-205ENST00000560945 ZKSCAN3Q9BRR0 538 aa26.37■■□□□ 1.81
SNX22-205ENST00000560945 CNNM2Q9H8M5 875 aa26.37■■□□□ 1.81
SNX22-205ENST00000560945 SERPINA10Q9UK55 444 aa26.37■■□□□ 1.81
SNX22-205ENST00000560945 DDX52Q9Y2R4 599 aaKnown RBP eCLIP26.37■■□□□ 1.81
SNX22-205ENST00000560945 NFIAQ12857 509 aa26.36■■□□□ 1.81
SNX22-205ENST00000560945 CIAPIN1Q6FI81 312 aa26.36■■□□□ 1.81
SNX22-205ENST00000560945 ARHGAP27Q6ZUM4 889 aa26.36■■□□□ 1.81
SNX22-205ENST00000560945 KRT23Q9C075 422 aa26.36■■□□□ 1.81
SNX22-205ENST00000560945 RNF41Q9H4P4 317 aaPredicted RBP26.36■■□□□ 1.81
SNX22-205ENST00000560945 MYO3BQ8WXR4 1341 aa26.35■■□□□ 1.81
SNX22-205ENST00000560945 SHTN1A0MZ66 631 aa26.35■■□□□ 1.81
SNX22-205ENST00000560945 POLR3DP05423 398 aaPredicted RBP26.35■■□□□ 1.81
SNX22-205ENST00000560945 FGRP09769 529 aa26.35■■□□□ 1.81
SNX22-205ENST00000560945 SH2B1Q9NRF2 756 aaPredicted RBP26.35■■□□□ 1.81
SNX22-205ENST00000560945 BRPF3Q9ULD4 1205 aa26.35■■□□□ 1.81
SNX22-205ENST00000560945 WDR19Q8NEZ3 1342 aa26.34■■□□□ 1.81
SNX22-205ENST00000560945 SH2B2O14492 632 aaPredicted RBP26.34■■□□□ 1.81
SNX22-205ENST00000560945 SLC44A5Q8NCS7 719 aa26.34■■□□□ 1.81
SNX22-205ENST00000560945 PRMT6Q96LA8 375 aaPredicted RBP26.34■■□□□ 1.81
SNX22-205ENST00000560945 FOCADQ5VW36 1801 aa26.33■■□□□ 1.81
SNX22-205ENST00000560945 RAB11FIP4Q86YS3 637 aa26.33■■□□□ 1.81
SNX22-205ENST00000560945 ZFPM1Q8IX07 1006 aa26.33■■□□□ 1.81
SNX22-205ENST00000560945 FBXL16Q8N461 479 aa26.33■■□□□ 1.81
SNX22-205ENST00000560945 IGDCC4Q8TDY8 1250 aa26.33■■□□□ 1.81
SNX22-205ENST00000560945 TDRD3Q9H7E2 651 aaKnown RBP26.33■■□□□ 1.81
SNX22-205ENST00000560945 YBX3P16989 372 aaKnown RBP eCLIP26.32■■□□□ 1.8
SNX22-205ENST00000560945 INTS4Q96HW7 963 aaKnown RBP26.32■■□□□ 1.8
SNX22-205ENST00000560945 NAP1L2Q9ULW6 460 aaPredicted RBP26.32■■□□□ 1.8
SNX22-205ENST00000560945 ROBO3Q96MS0 1386 aa26.31■■□□□ 1.8
SNX22-205ENST00000560945 RANBP6O60518 1105 aaKnown RBP26.31■■□□□ 1.8
SNX22-205ENST00000560945 FAM47AQ5JRC9 791 aa26.31■■□□□ 1.8
SNX22-205ENST00000560945 AGBL3Q8NEM8 1001 aa26.31■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms