RNA–Protein interactions for RNA: ENST00000560634.1

CSPG4P11-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 11, humanhuman

BASIC

Gene CSPG4P11, Length 4,910 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P11-201ENST00000560634 FEZ2Q9UHY8 353 aaPredicted RBP14.75□□□□□ -0.05
CSPG4P11-201ENST00000560634 BACH1O14867 736 aa14.75□□□□□ -0.05
CSPG4P11-201ENST00000560634 HPDP32754 393 aaPredicted RBP14.75□□□□□ -0.05
CSPG4P11-201ENST00000560634 PCK1P35558 622 aa14.75□□□□□ -0.05
CSPG4P11-201ENST00000560634 ZNF75DP51815 510 aa14.75□□□□□ -0.05
CSPG4P11-201ENST00000560634 SLC8A3P57103 927 aa14.75□□□□□ -0.05
CSPG4P11-201ENST00000560634 UTP14CQ5TAP6 766 aaKnown RBP14.75□□□□□ -0.05
CSPG4P11-201ENST00000560634 EYA3Q99504 573 aa14.75□□□□□ -0.05
CSPG4P11-201ENST00000560634 BABAM1Q9NWV8 329 aa14.75□□□□□ -0.05
CSPG4P11-201ENST00000560634 DENND2AQ9ULE3 1009 aa14.75□□□□□ -0.05
CSPG4P11-201ENST00000560634 DMRT2Q9Y5R5 561 aa14.75□□□□□ -0.05
CSPG4P11-201ENST00000560634 DKC1O60832 514 aaKnown RBP eCLIP14.75□□□□□ -0.05
CSPG4P11-201ENST00000560634 PAK2Q13177 524 aa14.75□□□□□ -0.05
CSPG4P11-201ENST00000560634 BIRC3Q13489 604 aa14.75□□□□□ -0.05
CSPG4P11-201ENST00000560634 CCDC84Q86UT8 332 aaPredicted RBP14.75□□□□□ -0.05
CSPG4P11-201ENST00000560634 CARD6Q9BX69 1037 aa14.75□□□□□ -0.05
CSPG4P11-201ENST00000560634 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.74□□□□□ -0.05
CSPG4P11-201ENST00000560634 RPGRIP1Q96KN7 1286 aa14.74□□□□□ -0.05
CSPG4P11-201ENST00000560634 DDX21Q9NR30 783 aaKnown RBP eCLIP14.74□□□□□ -0.05
CSPG4P11-201ENST00000560634 ANGEL1Q9UNK9 670 aaKnown RBP14.74□□□□□ -0.05
CSPG4P11-201ENST00000560634 UNC13AQ9UPW8 1703 aa14.74□□□□□ -0.05
CSPG4P11-201ENST00000560634 CTNND2Q9UQB3 1225 aa14.74□□□□□ -0.05
CSPG4P11-201ENST00000560634 ZNF608Q9ULD9 1512 aaPredicted RBP14.74□□□□□ -0.05
CSPG4P11-201ENST00000560634 PCF11O94913 1555 aaKnown RBP14.74□□□□□ -0.05
CSPG4P11-201ENST00000560634 ASIC2Q16515 512 aa14.74□□□□□ -0.05
CSPG4P11-201ENST00000560634 TTC16Q8NEE8 873 aa14.74□□□□□ -0.05
CSPG4P11-201ENST00000560634 MYRIPQ8NFW9 859 aa14.74□□□□□ -0.05
CSPG4P11-201ENST00000560634 CCT6BQ92526 530 aa14.74□□□□□ -0.05
CSPG4P11-201ENST00000560634 CALUO43852 315 aaPredicted RBP14.74□□□□□ -0.05
CSPG4P11-201ENST00000560634 MAGEA1P43355 309 aa14.74□□□□□ -0.05
CSPG4P11-201ENST00000560634 PAK1Q13153 545 aa14.74□□□□□ -0.05
CSPG4P11-201ENST00000560634 TSNAXIP1Q2TAA8 658 aa14.74□□□□□ -0.05
CSPG4P11-201ENST00000560634 CWF19L2Q2TBE0 894 aaKnown RBP14.74□□□□□ -0.05
CSPG4P11-201ENST00000560634 PLIN2Q99541 437 aa14.74□□□□□ -0.05
CSPG4P11-201ENST00000560634 NUCKS1Q9H1E3 243 aaKnown RBP14.74□□□□□ -0.05
CSPG4P11-201ENST00000560634 AGTPBP1Q9UPW5 1226 aa14.74□□□□□ -0.05
CSPG4P11-201ENST00000560634 MTMR3Q13615 1198 aa14.74□□□□□ -0.05
CSPG4P11-201ENST00000560634 LGSNQ5TDP6 509 aa14.74□□□□□ -0.05
CSPG4P11-201ENST00000560634 CCDC117Q8IWD4 279 aaPredicted RBP14.74□□□□□ -0.05
CSPG4P11-201ENST00000560634 DCAF5Q96JK2 942 aa14.74□□□□□ -0.05
CSPG4P11-201ENST00000560634 CABS1Q96KC9 395 aa14.74□□□□□ -0.05
CSPG4P11-201ENST00000560634 ZKSCAN3Q9BRR0 538 aa14.74□□□□□ -0.05
CSPG4P11-201ENST00000560634 EXOC7Q9UPT5 735 aa14.74□□□□□ -0.05
CSPG4P11-201ENST00000560634 VSIG1Q86XK7 387 aa14.73□□□□□ -0.05
CSPG4P11-201ENST00000560634 CERS3Q8IU89 383 aa14.73□□□□□ -0.05
CSPG4P11-201ENST00000560634 CPSF2Q9P2I0 782 aaKnown RBP14.73□□□□□ -0.05
CSPG4P11-201ENST00000560634 E7EVH7 732 aa14.73□□□□□ -0.05
CSPG4P11-201ENST00000560634 RIOK3O14730 519 aaKnown RBP14.73□□□□□ -0.05
CSPG4P11-201ENST00000560634 MBD4O95243 580 aa14.73□□□□□ -0.05
CSPG4P11-201ENST00000560634 GBP1P32455 592 aa14.73□□□□□ -0.05
CSPG4P11-201ENST00000560634 HSPA1LP34931 641 aa14.73□□□□□ -0.05
CSPG4P11-201ENST00000560634 AFAP1L2Q8N4X5 818 aa14.73□□□□□ -0.05
CSPG4P11-201ENST00000560634 KIFC2Q96AC6 838 aa14.73□□□□□ -0.05
CSPG4P11-201ENST00000560634 SYNRGQ9UMZ2 1314 aa14.73□□□□□ -0.05
CSPG4P11-201ENST00000560634 GOLGA6BA6NDN3 693 aa14.73□□□□□ -0.05
CSPG4P11-201ENST00000560634 KIF3CO14782 793 aa14.73□□□□□ -0.05
CSPG4P11-201ENST00000560634 KRT9P35527 623 aa14.73□□□□□ -0.05
CSPG4P11-201ENST00000560634 NLRP12P59046 1061 aa14.73□□□□□ -0.05
CSPG4P11-201ENST00000560634 SDCCAG8Q86SQ7 713 aaPredicted RBP14.73□□□□□ -0.05
CSPG4P11-201ENST00000560634 MIPOL1Q8TD10 442 aa14.73□□□□□ -0.05
CSPG4P11-201ENST00000560634 NSFL1CQ9UNZ2 370 aaKnown RBP14.73□□□□□ -0.05
CSPG4P11-201ENST00000560634 MAP3K5Q99683 1374 aa14.73□□□□□ -0.05
CSPG4P11-201ENST00000560634 EYA2O00167 538 aa14.73□□□□□ -0.05
CSPG4P11-201ENST00000560634 TSPYL6Q8N831 410 aa14.73□□□□□ -0.05
CSPG4P11-201ENST00000560634 ZBTB7BO15156 539 aaPredicted RBP14.72□□□□□ -0.05
CSPG4P11-201ENST00000560634 IGSF3O75054 1194 aa14.72□□□□□ -0.05
CSPG4P11-201ENST00000560634 RXRAP19793 462 aa14.72□□□□□ -0.05
CSPG4P11-201ENST00000560634 CEP85LQ5SZL2 805 aa14.72□□□□□ -0.05
CSPG4P11-201ENST00000560634 SYCE1Q8N0S2 351 aa14.72□□□□□ -0.05
CSPG4P11-201ENST00000560634 PIK3C2GO75747 1445 aa14.72□□□□□ -0.05
CSPG4P11-201ENST00000560634 DENND4BO75064 1496 aaPredicted RBP14.72□□□□□ -0.05
CSPG4P11-201ENST00000560634 KRT5P13647 590 aa14.72□□□□□ -0.05
CSPG4P11-201ENST00000560634 FBLN1P23142 703 aa14.72□□□□□ -0.05
CSPG4P11-201ENST00000560634 UAP1Q16222 522 aaPredicted RBP14.72□□□□□ -0.05
CSPG4P11-201ENST00000560634 DIS3L2Q8IYB7 885 aaKnown RBP14.72□□□□□ -0.05
CSPG4P11-201ENST00000560634 APPBP2Q92624 585 aa14.72□□□□□ -0.05
CSPG4P11-201ENST00000560634 PLCH2O75038 1416 aa14.72□□□□□ -0.05
CSPG4P11-201ENST00000560634 CASQ2O14958 399 aaPredicted RBP14.72□□□□□ -0.05
CSPG4P11-201ENST00000560634 FLOT1O75955 427 aa14.72□□□□□ -0.05
CSPG4P11-201ENST00000560634 MCUR1Q96AQ8 359 aa14.72□□□□□ -0.05
CSPG4P11-201ENST00000560634 SIRT1Q96EB6 747 aa14.72□□□□□ -0.05
CSPG4P11-201ENST00000560634 SLC27A2O14975 620 aa14.71□□□□□ -0.05
CSPG4P11-201ENST00000560634 PPFIA4O75335 1185 aa14.71□□□□□ -0.05
CSPG4P11-201ENST00000560634 HOXB7P09629 217 aa14.71□□□□□ -0.05
CSPG4P11-201ENST00000560634 PLS1Q14651 629 aa14.71□□□□□ -0.05
CSPG4P11-201ENST00000560634 CFAP221Q4G0U5 840 aa14.71□□□□□ -0.05
CSPG4P11-201ENST00000560634 CBX8Q9HC52 389 aa14.71□□□□□ -0.05
CSPG4P11-201ENST00000560634 USH1CQ9Y6N9 552 aa14.71□□□□□ -0.05
CSPG4P11-201ENST00000560634 STK10O94804 968 aaKnown RBP14.71□□□□□ -0.05
CSPG4P11-201ENST00000560634 CCDC62Q6P9F0 684 aa14.71□□□□□ -0.05
CSPG4P11-201ENST00000560634 FCHSD1Q86WN1 690 aa14.71□□□□□ -0.05
CSPG4P11-201ENST00000560634 MAIP1Q8WWC4 291 aa14.71□□□□□ -0.05
CSPG4P11-201ENST00000560634 NFE2L3Q9Y4A8 694 aa14.71□□□□□ -0.05
CSPG4P11-201ENST00000560634 PPIP5K1Q6PFW1 1433 aa14.71□□□□□ -0.05
CSPG4P11-201ENST00000560634 NFATC2IPQ8NCF5 419 aa14.71□□□□□ -0.05
CSPG4P11-201ENST00000560634 HELBQ8NG08 1087 aaPredicted RBP14.71□□□□□ -0.05
CSPG4P11-201ENST00000560634 POLR2DO15514 142 aaKnown RBP14.71□□□□□ -0.06
CSPG4P11-201ENST00000560634 AKNAD1Q5T1N1 836 aa14.71□□□□□ -0.06
CSPG4P11-201ENST00000560634 CCDC51Q96ER9 411 aa14.71□□□□□ -0.06
CSPG4P11-201ENST00000560634 PLCB1Q9NQ66 1216 aa14.71□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms