RNA–Protein interactions for RNA: ENST00000560311.1

IRF9-208, Transcript of interferon regulatory factor 9, humanhuman

TSL 2

Gene IRF9, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9-208ENST00000560311 RBM26Q5T8P6 1007 aaKnown RBP8.17□□□□□ -1.1
IRF9-208ENST00000560311 RSBN1LQ6PCB5 846 aaPredicted RBP8.17□□□□□ -1.1
IRF9-208ENST00000560311 TXNRD3Q86VQ6 643 aa8.17□□□□□ -1.1
IRF9-208ENST00000560311 DPF2Q92785 391 aa8.17□□□□□ -1.1
IRF9-208ENST00000560311 API5Q9BZZ5 524 aaKnown RBP8.17□□□□□ -1.1
IRF9-208ENST00000560311 CNNM1Q9NRU3 951 aa8.17□□□□□ -1.1
IRF9-208ENST00000560311 CNOT7Q9UIV1 285 aaKnown RBP8.17□□□□□ -1.1
IRF9-208ENST00000560311 ZBED9Q6R2W3 1325 aa8.17□□□□□ -1.1
IRF9-208ENST00000560311 IRS2Q9Y4H2 1338 aa8.17□□□□□ -1.1
IRF9-208ENST00000560311 USP17L3A6NCW0 530 aa8.16□□□□□ -1.1
IRF9-208ENST00000560311 USP17L4A6NCW7 530 aa8.16□□□□□ -1.1
IRF9-208ENST00000560311 TMEM88BA6NKF7 163 aa8.16□□□□□ -1.1
IRF9-208ENST00000560311 TRAF5O00463 557 aa8.16□□□□□ -1.1
IRF9-208ENST00000560311 SIAH2O43255 324 aa8.16□□□□□ -1.1
IRF9-208ENST00000560311 TAF5LO75529 589 aa8.16□□□□□ -1.1
IRF9-208ENST00000560311 VIL1P09327 827 aaKnown RBP8.16□□□□□ -1.1
IRF9-208ENST00000560311 HIRAP54198 1017 aaPredicted RBP8.16□□□□□ -1.1
IRF9-208ENST00000560311 USP17L1Q7RTZ2 530 aa8.16□□□□□ -1.1
IRF9-208ENST00000560311 PODNQ7Z5L7 613 aa8.16□□□□□ -1.1
IRF9-208ENST00000560311 JMYQ8N9B5 988 aa8.16□□□□□ -1.1
IRF9-208ENST00000560311 AGBL3Q8NEM8 1001 aa8.16□□□□□ -1.1
IRF9-208ENST00000560311 HELBQ8NG08 1087 aaPredicted RBP8.16□□□□□ -1.1
IRF9-208ENST00000560311 ARAP2Q8WZ64 1704 aa8.16□□□□□ -1.1
IRF9-208ENST00000560311 ZFP42Q96MM3 310 aa8.16□□□□□ -1.1
IRF9-208ENST00000560311 GLIS2Q9BZE0 524 aaPredicted RBP8.16□□□□□ -1.1
IRF9-208ENST00000560311 COA1Q9GZY4 146 aa8.16□□□□□ -1.1
IRF9-208ENST00000560311 MKRN1Q9UHC7 482 aaKnown RBP8.16□□□□□ -1.1
IRF9-208ENST00000560311 WASF2Q9Y6W5 498 aa8.16□□□□□ -1.1
IRF9-208ENST00000560311 MYO3BQ8WXR4 1341 aa8.15□□□□□ -1.1
IRF9-208ENST00000560311 SNAP23O00161 211 aa8.15□□□□□ -1.1
IRF9-208ENST00000560311 UBTFL1P0CB47 393 aaPredicted RBP8.15□□□□□ -1.1
IRF9-208ENST00000560311 ZNF280AP59817 542 aaPredicted RBP8.15□□□□□ -1.1
IRF9-208ENST00000560311 FMR1Q06787 632 aaKnown RBP eCLIP8.15□□□□□ -1.1
IRF9-208ENST00000560311 DACT2Q5SW24 774 aa8.15□□□□□ -1.1
IRF9-208ENST00000560311 SMYD5Q6GMV2 418 aa8.15□□□□□ -1.1
IRF9-208ENST00000560311 LDHAL6AQ6ZMR3 332 aa8.15□□□□□ -1.1
IRF9-208ENST00000560311 ZNF804AQ7Z570 1209 aa8.15□□□□□ -1.1
IRF9-208ENST00000560311 ZC3H15Q8WU90 426 aaKnown RBP8.15□□□□□ -1.1
IRF9-208ENST00000560311 HLA-CQ95604 372 aa8.15□□□□□ -1.1
IRF9-208ENST00000560311 GMLQ99445 158 aa8.15□□□□□ -1.1
IRF9-208ENST00000560311 MXD3Q9BW11 206 aa8.15□□□□□ -1.1
IRF9-208ENST00000560311 PUS3Q9BZE2 481 aaKnown RBP8.15□□□□□ -1.1
IRF9-208ENST00000560311 USP44Q9H0E7 712 aa8.15□□□□□ -1.1
IRF9-208ENST00000560311 GGA3Q9NZ52 723 aa8.15□□□□□ -1.1
IRF9-208ENST00000560311 ABT1Q9ULW3 272 aaKnown RBP8.15□□□□□ -1.1
IRF9-208ENST00000560311 ASTN2O75129 1339 aaPredicted RBP8.14□□□□□ -1.11
IRF9-208ENST00000560311 MROH5Q6ZUA9 1318 aa8.14□□□□□ -1.11
IRF9-208ENST00000560311 ADM5C9JUS6 153 aa8.14□□□□□ -1.11
IRF9-208ENST00000560311 USP17L8P0C7I0 530 aa8.14□□□□□ -1.11
IRF9-208ENST00000560311 TRIM27P14373 513 aa8.14□□□□□ -1.11
IRF9-208ENST00000560311 GSK3AP49840 483 aa8.14□□□□□ -1.11
IRF9-208ENST00000560311 STRIP1Q5VSL9 837 aa8.14□□□□□ -1.11
IRF9-208ENST00000560311 C15orf52Q6ZUT6 534 aaKnown RBP8.14□□□□□ -1.11
IRF9-208ENST00000560311 KLHDC4Q8TBB5 520 aa8.14□□□□□ -1.11
IRF9-208ENST00000560311 MEIS3Q99687 375 aa8.14□□□□□ -1.11
IRF9-208ENST00000560311 ZNF408Q9H9D4 720 aa8.14□□□□□ -1.11
IRF9-208ENST00000560311 MYOZ2Q9NPC6 264 aa8.14□□□□□ -1.11
IRF9-208ENST00000560311 PGAP2Q9UHJ9 254 aa8.14□□□□□ -1.11
IRF9-208ENST00000560311 RASSF10A6NK89 507 aa8.13□□□□□ -1.11
IRF9-208ENST00000560311 GPR37O15354 613 aa8.13□□□□□ -1.11
IRF9-208ENST00000560311 PLIN1O60240 522 aa8.13□□□□□ -1.11
IRF9-208ENST00000560311 BCAR3O75815 825 aa8.13□□□□□ -1.11
IRF9-208ENST00000560311 SASH1O94885 1247 aa8.13□□□□□ -1.11
IRF9-208ENST00000560311 CELF2O95319 508 aaKnown RBP8.13□□□□□ -1.11
IRF9-208ENST00000560311 GTF2IP78347 998 aa8.13□□□□□ -1.11
IRF9-208ENST00000560311 KCNMA1Q12791 1236 aa8.13□□□□□ -1.11
IRF9-208ENST00000560311 LRRC24Q50LG9 513 aa8.13□□□□□ -1.11
IRF9-208ENST00000560311 METTL24Q5JXM2 366 aa8.13□□□□□ -1.11
IRF9-208ENST00000560311 ATF7IPQ6VMQ6 1270 aa8.13□□□□□ -1.11
IRF9-208ENST00000560311 KRT26Q7Z3Y9 468 aa8.13□□□□□ -1.11
IRF9-208ENST00000560311 VGLL2Q8N8G2 317 aa8.13□□□□□ -1.11
IRF9-208ENST00000560311 EHBP1Q8NDI1 1231 aa8.13□□□□□ -1.11
IRF9-208ENST00000560311 ARHGAP45Q92619 1136 aa8.13□□□□□ -1.11
IRF9-208ENST00000560311 FRAT1Q92837 279 aaPredicted RBP8.13□□□□□ -1.11
IRF9-208ENST00000560311 CD209Q9NNX6 404 aa8.13□□□□□ -1.11
IRF9-208ENST00000560311 TNNQ9UQP3 1299 aa8.13□□□□□ -1.11
IRF9-208ENST00000560311 LRRFIP2Q9Y608 721 aaKnown RBP8.13□□□□□ -1.11
IRF9-208ENST00000560311 SOBPA7XYQ1 873 aa8.12□□□□□ -1.11
IRF9-208ENST00000560311 IL1R1P14778 569 aa8.12□□□□□ -1.11
IRF9-208ENST00000560311 RFX5P48382 616 aaPredicted RBP8.12□□□□□ -1.11
IRF9-208ENST00000560311 UBE4AQ14139 1066 aa8.12□□□□□ -1.11
IRF9-208ENST00000560311 SCARF1Q14162 830 aa8.12□□□□□ -1.11
IRF9-208ENST00000560311 ANGEL2Q5VTE6 544 aaKnown RBP8.12□□□□□ -1.11
IRF9-208ENST00000560311 CST9Q5W186 159 aa8.12□□□□□ -1.11
IRF9-208ENST00000560311 INTS3Q68E01 1043 aaKnown RBP8.12□□□□□ -1.11
IRF9-208ENST00000560311 CDC37L1Q7L3B6 337 aa8.12□□□□□ -1.11
IRF9-208ENST00000560311 USP48Q86UV5 1035 aa8.12□□□□□ -1.11
IRF9-208ENST00000560311 KIAA0825Q8IV33 1275 aa8.12□□□□□ -1.11
IRF9-208ENST00000560311 CERS5Q8N5B7 392 aa8.12□□□□□ -1.11
IRF9-208ENST00000560311 DCPSQ96C86 337 aaKnown RBP8.12□□□□□ -1.11
IRF9-208ENST00000560311 JAG2Q9Y219 1238 aa8.12□□□□□ -1.11
IRF9-208ENST00000560311 RIPOR2Q9Y4F9 1068 aa8.12□□□□□ -1.11
IRF9-208ENST00000560311 TLL2Q9Y6L7 1015 aa8.12□□□□□ -1.11
IRF9-208ENST00000560311 COL1A1P02452 1464 aaPredicted RBP8.12□□□□□ -1.11
IRF9-208ENST00000560311 PCNTO95613 3336 aa8.11□□□□□ -1.11
IRF9-208ENST00000560311 PITPNM2Q9BZ72 1349 aa8.11□□□□□ -1.11
IRF9-208ENST00000560311 EYA2O00167 538 aa8.11□□□□□ -1.11
IRF9-208ENST00000560311 IPO8O15397 1037 aaKnown RBP8.11□□□□□ -1.11
IRF9-208ENST00000560311 HSPA1AP0DMV8 641 aaKnown RBP8.11□□□□□ -1.11
IRF9-208ENST00000560311 HSPA1BP0DMV9 641 aaKnown RBP8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms