RNA–Protein interactions for RNA: ENST00000560220.5

KNSTRN-209, Transcript of kinetochore localized astrin (SPAG5) binding protein, humanhuman

TSL 5

Gene KNSTRN, Length 903 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNSTRN-209ENST00000560220 TNNQ9UQP3 1299 aa12.98□□□□□ -0.33
KNSTRN-209ENST00000560220 ZFHX4Q86UP3 3567 aa12.97□□□□□ -0.33
KNSTRN-209ENST00000560220 SH3TC1Q8TE82 1336 aa12.97□□□□□ -0.33
KNSTRN-209ENST00000560220 ERC2O15083 957 aa12.97□□□□□ -0.33
KNSTRN-209ENST00000560220 TLL1O43897 1013 aa12.97□□□□□ -0.33
KNSTRN-209ENST00000560220 TRIM27P14373 513 aa12.97□□□□□ -0.33
KNSTRN-209ENST00000560220 RPS8P62241 208 aaKnown RBP12.97□□□□□ -0.33
KNSTRN-209ENST00000560220 HDAC1Q13547 482 aaPredicted RBP12.97□□□□□ -0.33
KNSTRN-209ENST00000560220 DCTN1Q14203 1278 aa12.97□□□□□ -0.33
KNSTRN-209ENST00000560220 SKIV2LQ15477 1246 aaKnown RBP12.97□□□□□ -0.33
KNSTRN-209ENST00000560220 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.97□□□□□ -0.33
KNSTRN-209ENST00000560220 COA7Q96BR5 231 aa12.97□□□□□ -0.33
KNSTRN-209ENST00000560220 API5Q9BZZ5 524 aaKnown RBP12.97□□□□□ -0.33
KNSTRN-209ENST00000560220 DAXXQ9UER7 740 aaPredicted RBP12.97□□□□□ -0.33
KNSTRN-209ENST00000560220 NOB1Q9ULX3 412 aaKnown RBP12.97□□□□□ -0.33
KNSTRN-209ENST00000560220 TRIM32Q13049 653 aa12.96□□□□□ -0.33
KNSTRN-209ENST00000560220 RTL5Q5HYW3 569 aaPredicted RBP12.96□□□□□ -0.33
KNSTRN-209ENST00000560220 MICALL1Q8N3F8 863 aa12.96□□□□□ -0.33
KNSTRN-209ENST00000560220 PARK7Q99497 189 aaKnown RBP12.96□□□□□ -0.33
KNSTRN-209ENST00000560220 SENP6Q9GZR1 1112 aaPredicted RBP12.96□□□□□ -0.33
KNSTRN-209ENST00000560220 MAST2Q6P0Q8 1798 aa12.96□□□□□ -0.34
KNSTRN-209ENST00000560220 PPIL2Q13356 520 aa12.95□□□□□ -0.34
KNSTRN-209ENST00000560220 NBR1Q14596 966 aa12.95□□□□□ -0.34
KNSTRN-209ENST00000560220 PRDM5Q9NQX1 630 aaPredicted RBP12.95□□□□□ -0.34
KNSTRN-209ENST00000560220 LRRC37A2A6NM11 1700 aa12.94□□□□□ -0.34
KNSTRN-209ENST00000560220 COL4A1P02462 1669 aa12.94□□□□□ -0.34
KNSTRN-209ENST00000560220 ATN1P54259 1190 aaPredicted RBP12.94□□□□□ -0.34
KNSTRN-209ENST00000560220 STK31Q9BXU1 1019 aa12.94□□□□□ -0.34
KNSTRN-209ENST00000560220 SNCAIPQ9Y6H5 919 aa12.94□□□□□ -0.34
KNSTRN-209ENST00000560220 ECM29Q5VYK3 1845 aa12.94□□□□□ -0.34
KNSTRN-209ENST00000560220 CEMIPQ8WUJ3 1361 aa12.94□□□□□ -0.34
KNSTRN-209ENST00000560220 C5orf42Q9H799 3197 aa12.93□□□□□ -0.34
KNSTRN-209ENST00000560220 PTPRCP08575 1304 aa12.93□□□□□ -0.34
KNSTRN-209ENST00000560220 HOXB7P09629 217 aa12.93□□□□□ -0.34
KNSTRN-209ENST00000560220 CYP2C8P10632 490 aa12.93□□□□□ -0.34
KNSTRN-209ENST00000560220 ALADP13716 330 aa12.93□□□□□ -0.34
KNSTRN-209ENST00000560220 SF3B3Q15393 1217 aaKnown RBP12.93□□□□□ -0.34
KNSTRN-209ENST00000560220 CCDC30Q5VVM6 783 aa12.93□□□□□ -0.34
KNSTRN-209ENST00000560220 TTLL5Q6EMB2 1281 aa12.93□□□□□ -0.34
KNSTRN-209ENST00000560220 NLRP10Q86W26 655 aa12.93□□□□□ -0.34
KNSTRN-209ENST00000560220 ITPRIPQ8IWB1 547 aa12.93□□□□□ -0.34
KNSTRN-209ENST00000560220 MRPL50Q8N5N7 158 aaKnown RBP12.93□□□□□ -0.34
KNSTRN-209ENST00000560220 C8orf58Q8NAV2 365 aa12.93□□□□□ -0.34
KNSTRN-209ENST00000560220 CD320Q9NPF0 282 aa12.93□□□□□ -0.34
KNSTRN-209ENST00000560220 ELL2O00472 640 aaPredicted RBP12.92□□□□□ -0.34
KNSTRN-209ENST00000560220 ATP2B4P23634 1241 aa12.92□□□□□ -0.34
KNSTRN-209ENST00000560220 ID4P47928 161 aa12.92□□□□□ -0.34
KNSTRN-209ENST00000560220 RTP1P59025 263 aa12.92□□□□□ -0.34
KNSTRN-209ENST00000560220 HERVK_113Q902F9 699 aa12.92□□□□□ -0.34
KNSTRN-209ENST00000560220 ZBTB40Q9NUA8 1239 aa12.92□□□□□ -0.34
KNSTRN-209ENST00000560220 ATP11BQ9Y2G3 1177 aa12.92□□□□□ -0.34
KNSTRN-209ENST00000560220 PCDHAC2Q9Y5I4 1007 aa12.92□□□□□ -0.34
KNSTRN-209ENST00000560220 KMT2BQ9UMN6 2715 aaPredicted RBP12.92□□□□□ -0.34
KNSTRN-209ENST00000560220 DNAH12Q6ZR08 3092 aa12.91□□□□□ -0.34
KNSTRN-209ENST00000560220 PTPN5P54829 565 aa12.91□□□□□ -0.34
KNSTRN-209ENST00000560220 CCDC129Q6ZRS4 1044 aa12.91□□□□□ -0.34
KNSTRN-209ENST00000560220 TMEM57Q8N5G2 664 aa12.91□□□□□ -0.34
KNSTRN-209ENST00000560220 TSPYL6Q8N831 410 aa12.91□□□□□ -0.34
KNSTRN-209ENST00000560220 COG5Q9UP83 839 aa12.91□□□□□ -0.34
KNSTRN-209ENST00000560220 SPTBN4Q9H254 2564 aa12.9□□□□□ -0.34
KNSTRN-209ENST00000560220 DEKP35659 375 aaKnown RBP12.9□□□□□ -0.34
KNSTRN-209ENST00000560220 PPATQ06203 517 aa12.9□□□□□ -0.34
KNSTRN-209ENST00000560220 TNFAIP1Q13829 316 aa12.9□□□□□ -0.34
KNSTRN-209ENST00000560220 CFAP100Q494V2 611 aa12.9□□□□□ -0.34
KNSTRN-209ENST00000560220 SMC5Q8IY18 1101 aa12.9□□□□□ -0.34
KNSTRN-209ENST00000560220 ZKSCAN4Q969J2 545 aaPredicted RBP12.9□□□□□ -0.34
KNSTRN-209ENST00000560220 PRMT6Q96LA8 375 aaPredicted RBP12.9□□□□□ -0.34
KNSTRN-209ENST00000560220 XDHP47989 1333 aa12.89□□□□□ -0.35
KNSTRN-209ENST00000560220 SPDYE2BA6NHP3 402 aa12.89□□□□□ -0.35
KNSTRN-209ENST00000560220 SPDYE6P0CI01 402 aa12.89□□□□□ -0.35
KNSTRN-209ENST00000560220 HSP90AB3PQ58FF7 597 aa12.89□□□□□ -0.35
KNSTRN-209ENST00000560220 ANKS1AQ92625 1134 aa12.89□□□□□ -0.35
KNSTRN-209ENST00000560220 UPF2Q9HAU5 1272 aaKnown RBP12.89□□□□□ -0.35
KNSTRN-209ENST00000560220 REV3LO60673 3130 aa12.88□□□□□ -0.35
KNSTRN-209ENST00000560220 PRKAR2AP13861 404 aaKnown RBP12.88□□□□□ -0.35
KNSTRN-209ENST00000560220 PBX2P40425 430 aa12.88□□□□□ -0.35
KNSTRN-209ENST00000560220 CDAN1Q8IWY9 1227 aa12.88□□□□□ -0.35
KNSTRN-209ENST00000560220 PRSS33Q8NF86 280 aa12.88□□□□□ -0.35
KNSTRN-209ENST00000560220 MFSD14AQ96MC6 490 aa12.88□□□□□ -0.35
KNSTRN-209ENST00000560220 TEPSINQ96N21 525 aa12.88□□□□□ -0.35
KNSTRN-209ENST00000560220 CNTNAP3BQ96NU0 1288 aa12.88□□□□□ -0.35
KNSTRN-209ENST00000560220 WRNIP1Q96S55 665 aa12.88□□□□□ -0.35
KNSTRN-209ENST00000560220 PBX4Q9BYU1 374 aa12.88□□□□□ -0.35
KNSTRN-209ENST00000560220 CNTNAP3Q9BZ76 1288 aa12.88□□□□□ -0.35
KNSTRN-209ENST00000560220 COA1Q9GZY4 146 aa12.88□□□□□ -0.35
KNSTRN-209ENST00000560220 CACNA1FO60840 1977 aa12.87□□□□□ -0.35
KNSTRN-209ENST00000560220 EPHB4P54760 987 aa12.87□□□□□ -0.35
KNSTRN-209ENST00000560220 GTF2IP78347 998 aa12.87□□□□□ -0.35
KNSTRN-209ENST00000560220 ACAP1Q15027 740 aa12.87□□□□□ -0.35
KNSTRN-209ENST00000560220 MAP3K21Q5TCX8 1036 aa12.87□□□□□ -0.35
KNSTRN-209ENST00000560220 LHX8Q68G74 356 aa12.87□□□□□ -0.35
KNSTRN-209ENST00000560220 GJD3Q8N144 294 aa12.87□□□□□ -0.35
KNSTRN-209ENST00000560220 IGSF5Q9NSI5 407 aa12.87□□□□□ -0.35
KNSTRN-209ENST00000560220 PLXNA1Q9UIW2 1896 aa12.87□□□□□ -0.35
KNSTRN-209ENST00000560220 MED23Q9ULK4 1368 aa12.86□□□□□ -0.35
KNSTRN-209ENST00000560220 SLC4A2P04920 1241 aa12.86□□□□□ -0.35
KNSTRN-209ENST00000560220 RBM5P52756 815 aaKnown RBP eCLIP12.86□□□□□ -0.35
KNSTRN-209ENST00000560220 BECN1Q14457 450 aa12.86□□□□□ -0.35
KNSTRN-209ENST00000560220 CHD8Q9HCK8 2581 aa12.86□□□□□ -0.35
KNSTRN-209ENST00000560220 AOX1Q06278 1338 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms