RNA–Protein interactions for RNA: ENST00000560127.1

RABGGTA-213, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-213ENST00000560127 LRIT3Q3SXY7 679 aa16.16■□□□□ 0.18
RABGGTA-213ENST00000560127 METTL24Q5JXM2 366 aa16.16■□□□□ 0.18
RABGGTA-213ENST00000560127 PRRT2Q7Z6L0 340 aaPredicted RBP16.16■□□□□ 0.18
RABGGTA-213ENST00000560127 COL25A1Q9BXS0 654 aaPredicted RBP16.16■□□□□ 0.18
RABGGTA-213ENST00000560127 FAM198AQ9UFP1 575 aa16.16■□□□□ 0.18
RABGGTA-213ENST00000560127 PLXNB2O15031 1838 aa16.16■□□□□ 0.18
RABGGTA-213ENST00000560127 ATRNL1Q5VV63 1379 aa16.15■□□□□ 0.18
RABGGTA-213ENST00000560127 PHF20L1A8MW92 1017 aa16.15■□□□□ 0.18
RABGGTA-213ENST00000560127 ALDH1L1O75891 902 aa16.15■□□□□ 0.18
RABGGTA-213ENST00000560127 PDE8BO95263 885 aa16.15■□□□□ 0.18
RABGGTA-213ENST00000560127 FASTKD5Q7L8L6 764 aaKnown RBP16.15■□□□□ 0.18
RABGGTA-213ENST00000560127 SLC45A1Q9Y2W3 748 aa16.15■□□□□ 0.18
RABGGTA-213ENST00000560127 DAGLAQ9Y4D2 1042 aa16.15■□□□□ 0.18
RABGGTA-213ENST00000560127 ZHX2Q9Y6X8 837 aa16.15■□□□□ 0.18
RABGGTA-213ENST00000560127 GADL1Q6ZQY3 521 aa16.14■□□□□ 0.17
RABGGTA-213ENST00000560127 ZFPM1Q8IX07 1006 aa16.14■□□□□ 0.17
RABGGTA-213ENST00000560127 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.14■□□□□ 0.17
RABGGTA-213ENST00000560127 TAOK2Q9UL54 1235 aa16.14■□□□□ 0.17
RABGGTA-213ENST00000560127 AFG3L2Q9Y4W6 797 aa16.14■□□□□ 0.17
RABGGTA-213ENST00000560127 NBPF7P0C2Y1 421 aaPredicted RBP16.13■□□□□ 0.17
RABGGTA-213ENST00000560127 SYN1P17600 705 aa16.13■□□□□ 0.17
RABGGTA-213ENST00000560127 PTPRAP18433 802 aa16.13■□□□□ 0.17
RABGGTA-213ENST00000560127 MAGEA10P43363 369 aaPredicted RBP16.13■□□□□ 0.17
RABGGTA-213ENST00000560127 EXOSC9Q06265 439 aaKnown RBP16.13■□□□□ 0.17
RABGGTA-213ENST00000560127 DIXDC1Q155Q3 683 aa16.13■□□□□ 0.17
RABGGTA-213ENST00000560127 SCYL3Q8IZE3 742 aa16.13■□□□□ 0.17
RABGGTA-213ENST00000560127 ANKLE1Q8NAG6 615 aa16.13■□□□□ 0.17
RABGGTA-213ENST00000560127 BICC1Q9H694 974 aaKnown RBP16.13■□□□□ 0.17
RABGGTA-213ENST00000560127 KIF16BQ96L93 1317 aa16.13■□□□□ 0.17
RABGGTA-213ENST00000560127 ATAD5Q96QE3 1844 aa16.12■□□□□ 0.17
RABGGTA-213ENST00000560127 FGFR2P21802 821 aa16.12■□□□□ 0.17
RABGGTA-213ENST00000560127 RABL6Q3YEC7 729 aaPredicted RBP16.12■□□□□ 0.17
RABGGTA-213ENST00000560127 SLC4A10Q6U841 1118 aa16.12■□□□□ 0.17
RABGGTA-213ENST00000560127 TDHQ8IZJ6 230 aa16.12■□□□□ 0.17
RABGGTA-213ENST00000560127 WDR66Q8TBY9 1149 aa16.12■□□□□ 0.17
RABGGTA-213ENST00000560127 SMCR8Q8TEV9 937 aaPredicted RBP16.12■□□□□ 0.17
RABGGTA-213ENST00000560127 SRCIN1Q9C0H9 1055 aa16.12■□□□□ 0.17
RABGGTA-213ENST00000560127 LOC285556D6RIA3 1793 aa16.12■□□□□ 0.17
RABGGTA-213ENST00000560127 ANKRD13CQ8N6S4 541 aa16.11■□□□□ 0.17
RABGGTA-213ENST00000560127 ANKRD44Q8N8A2 993 aa16.11■□□□□ 0.17
RABGGTA-213ENST00000560127 KLHDC4Q8TBB5 520 aa16.11■□□□□ 0.17
RABGGTA-213ENST00000560127 COA7Q96BR5 231 aa16.11■□□□□ 0.17
RABGGTA-213ENST00000560127 NBPF3Q9H094 633 aa16.11■□□□□ 0.17
RABGGTA-213ENST00000560127 PICK1Q9NRD5 415 aa16.11■□□□□ 0.17
RABGGTA-213ENST00000560127 USP40Q9NVE5 1235 aa16.11■□□□□ 0.17
RABGGTA-213ENST00000560127 UTYO14607 1347 aa16.11■□□□□ 0.17
RABGGTA-213ENST00000560127 SLURP2P0DP57 97 aa16.1■□□□□ 0.17
RABGGTA-213ENST00000560127 PUM3Q15397 648 aaKnown RBP16.1■□□□□ 0.17
RABGGTA-213ENST00000560127 HMGCRP04035 888 aa16.09■□□□□ 0.17
RABGGTA-213ENST00000560127 IFIT1P09914 478 aaKnown RBP16.09■□□□□ 0.17
RABGGTA-213ENST00000560127 PRDX5P30044 214 aa16.09■□□□□ 0.17
RABGGTA-213ENST00000560127 MAP3K10Q02779 954 aa16.09■□□□□ 0.17
RABGGTA-213ENST00000560127 TRIM32Q13049 653 aa16.09■□□□□ 0.17
RABGGTA-213ENST00000560127 SH3BP5LQ7L8J4 393 aa16.09■□□□□ 0.17
RABGGTA-213ENST00000560127 UBE2OQ9C0C9 1292 aaKnown RBP16.09■□□□□ 0.17
RABGGTA-213ENST00000560127 C11orf49Q9H6J7 331 aa16.09■□□□□ 0.17
RABGGTA-213ENST00000560127 SPINK5Q9NQ38 1064 aaPredicted RBP16.09■□□□□ 0.17
RABGGTA-213ENST00000560127 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.09■□□□□ 0.17
RABGGTA-213ENST00000560127 AGTPBP1Q9UPW5 1226 aa16.09■□□□□ 0.17
RABGGTA-213ENST00000560127 CDH23Q9H251 3354 aa16.09■□□□□ 0.17
RABGGTA-213ENST00000560127 FRMPD3Q5JV73 1810 aa16.08■□□□□ 0.17
RABGGTA-213ENST00000560127 TRIM75PA6NK02 468 aa16.08■□□□□ 0.16
RABGGTA-213ENST00000560127 RGS3P49796 1198 aa16.08■□□□□ 0.16
RABGGTA-213ENST00000560127 FAM110CQ1W6H9 321 aa16.08■□□□□ 0.16
RABGGTA-213ENST00000560127 CCDC184Q52MB2 194 aa16.08■□□□□ 0.16
RABGGTA-213ENST00000560127 NCBP3Q53F19 620 aaKnown RBP16.08■□□□□ 0.16
RABGGTA-213ENST00000560127 TREML2Q5T2D2 321 aa16.08■□□□□ 0.16
RABGGTA-213ENST00000560127 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.08■□□□□ 0.16
RABGGTA-213ENST00000560127 GJD2Q9UKL4 321 aa16.08■□□□□ 0.16
RABGGTA-213ENST00000560127 RPTORQ8N122 1335 aa16.08■□□□□ 0.16
RABGGTA-213ENST00000560127 RFX7Q2KHR2 1363 aa16.08■□□□□ 0.16
RABGGTA-213ENST00000560127 CCDC84Q86UT8 332 aaPredicted RBP16.07■□□□□ 0.16
RABGGTA-213ENST00000560127 IDI2Q9BXS1 227 aa16.07■□□□□ 0.16
RABGGTA-213ENST00000560127 HMX1Q9NP08 348 aaPredicted RBP16.07■□□□□ 0.16
RABGGTA-213ENST00000560127 OGDHLQ9ULD0 1010 aa16.07■□□□□ 0.16
RABGGTA-213ENST00000560127 LRRFIP2Q9Y608 721 aaKnown RBP16.07■□□□□ 0.16
RABGGTA-213ENST00000560127 NCOR1O75376 2440 aa16.07■□□□□ 0.16
RABGGTA-213ENST00000560127 PFASO15067 1338 aa16.06■□□□□ 0.16
RABGGTA-213ENST00000560127 DDTLA6NHG4 134 aaPredicted RBP16.06■□□□□ 0.16
RABGGTA-213ENST00000560127 CTNND1O60716 968 aaKnown RBP16.06■□□□□ 0.16
RABGGTA-213ENST00000560127 ENTPD3O75355 529 aa16.06■□□□□ 0.16
RABGGTA-213ENST00000560127 LDHBP07195 334 aaKnown RBP16.06■□□□□ 0.16
RABGGTA-213ENST00000560127 SLC5A1P13866 664 aa16.06■□□□□ 0.16
RABGGTA-213ENST00000560127 GUCD1Q96NT3 240 aa16.06■□□□□ 0.16
RABGGTA-213ENST00000560127 MUC3AQ02505 3323 aa16.06■□□□□ 0.16
RABGGTA-213ENST00000560127 WDR63Q8IWG1 891 aa16.05■□□□□ 0.16
RABGGTA-213ENST00000560127 TRIB2Q92519 343 aa16.05■□□□□ 0.16
RABGGTA-213ENST00000560127 LPIN2Q92539 896 aa16.05■□□□□ 0.16
RABGGTA-213ENST00000560127 PNMA3Q9UL41 463 aa16.05■□□□□ 0.16
RABGGTA-213ENST00000560127 COL2A1P02458 1487 aaPredicted RBP16.04■□□□□ 0.16
RABGGTA-213ENST00000560127 SALL1Q9NSC2 1324 aa16.04■□□□□ 0.16
RABGGTA-213ENST00000560127 POTEB2H3BUK9 544 aa16.04■□□□□ 0.16
RABGGTA-213ENST00000560127 ZSCAN29Q8IWY8 852 aaPredicted RBP16.04■□□□□ 0.16
RABGGTA-213ENST00000560127 DDX4Q9NQI0 724 aaKnown RBP16.04■□□□□ 0.16
RABGGTA-213ENST00000560127 GAKO14976 1311 aa16.03■□□□□ 0.16
RABGGTA-213ENST00000560127 EYA2O00167 538 aa16.03■□□□□ 0.16
RABGGTA-213ENST00000560127 RFX5P48382 616 aaPredicted RBP16.03■□□□□ 0.16
RABGGTA-213ENST00000560127 GCLCP48506 637 aaPredicted RBP16.03■□□□□ 0.16
RABGGTA-213ENST00000560127 MAP3K21Q5TCX8 1036 aa16.03■□□□□ 0.16
RABGGTA-213ENST00000560127 PROCA1Q8NCQ7 364 aaPredicted RBP16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms