RNA–Protein interactions for RNA: ENST00000559886.1

HERC1-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 1 (best)

Gene HERC1, Length 2,462 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-205ENST00000559886 TBC1D10CQ8IV04 446 aa14.47□□□□□ -0.09
HERC1-205ENST00000559886 TTC14Q96N46 770 aa14.47□□□□□ -0.09
HERC1-205ENST00000559886 TBC1D2Q9BYX2 928 aa14.47□□□□□ -0.09
HERC1-205ENST00000559886 ARPP21Q9UBL0 812 aaPredicted RBP14.47□□□□□ -0.09
HERC1-205ENST00000559886 WDHD1O75717 1129 aaPredicted RBP14.46□□□□□ -0.09
HERC1-205ENST00000559886 HMGB1P09429 215 aaKnown RBP14.46□□□□□ -0.09
HERC1-205ENST00000559886 CPA1P15085 419 aa14.46□□□□□ -0.09
HERC1-205ENST00000559886 GPR162Q16538 588 aa14.46□□□□□ -0.09
HERC1-205ENST00000559886 MCM9Q9NXL9 1143 aa14.46□□□□□ -0.09
HERC1-205ENST00000559886 FLT1P17948 1338 aa14.46□□□□□ -0.09
HERC1-205ENST00000559886 ZNF541Q9H0D2 1346 aa14.46□□□□□ -0.09
HERC1-205ENST00000559886 MINDY4BA8MYZ0 360 aa14.46□□□□□ -0.1
HERC1-205ENST00000559886 RPS6KB1P23443 525 aa14.46□□□□□ -0.1
HERC1-205ENST00000559886 CTDSPL2Q05D32 466 aa14.46□□□□□ -0.1
HERC1-205ENST00000559886 MAPKAPK5Q8IW41 473 aa14.46□□□□□ -0.1
HERC1-205ENST00000559886 MTMR14Q8NCE2 650 aa14.46□□□□□ -0.1
HERC1-205ENST00000559886 DPF2Q92785 391 aa14.46□□□□□ -0.1
HERC1-205ENST00000559886 AKNAD1Q5T1N1 836 aa14.45□□□□□ -0.1
HERC1-205ENST00000559886 PRMT6Q96LA8 375 aaPredicted RBP14.45□□□□□ -0.1
HERC1-205ENST00000559886 CYP2D7A0A087X1C5 515 aa14.44□□□□□ -0.1
HERC1-205ENST00000559886 SPDYE2BA6NHP3 402 aa14.44□□□□□ -0.1
HERC1-205ENST00000559886 SPDYE6P0CI01 402 aa14.44□□□□□ -0.1
HERC1-205ENST00000559886 HSCBQ8IWL3 235 aa14.44□□□□□ -0.1
HERC1-205ENST00000559886 STAG1Q8WVM7 1258 aa14.44□□□□□ -0.1
HERC1-205ENST00000559886 RNF181Q9P0P0 153 aa14.44□□□□□ -0.1
HERC1-205ENST00000559886 GJA3Q9Y6H8 435 aa14.44□□□□□ -0.1
HERC1-205ENST00000559886 GMPSP49915 693 aaPredicted RBP14.44□□□□□ -0.1
HERC1-205ENST00000559886 ZNF280AP59817 542 aaPredicted RBP14.44□□□□□ -0.1
HERC1-205ENST00000559886 DLGAP5Q15398 846 aa14.44□□□□□ -0.1
HERC1-205ENST00000559886 C12orf60Q5U649 245 aa14.44□□□□□ -0.1
HERC1-205ENST00000559886 DHX32Q7L7V1 743 aaKnown RBP14.44□□□□□ -0.1
HERC1-205ENST00000559886 NCOA7Q8NI08 942 aa14.44□□□□□ -0.1
HERC1-205ENST00000559886 ALDH8A1Q9H2A2 487 aaPredicted RBP14.44□□□□□ -0.1
HERC1-205ENST00000559886 PDRG1Q9NUG6 133 aa14.44□□□□□ -0.1
HERC1-205ENST00000559886 TACC3Q9Y6A5 838 aa14.44□□□□□ -0.1
HERC1-205ENST00000559886 SMIM22K7EJ46 135 aa14.43□□□□□ -0.1
HERC1-205ENST00000559886 GRIN3BO60391 1043 aa14.43□□□□□ -0.1
HERC1-205ENST00000559886 MCM2P49736 904 aa14.43□□□□□ -0.1
HERC1-205ENST00000559886 TRDNQ13061 729 aa14.43□□□□□ -0.1
HERC1-205ENST00000559886 MFSD6Q6ZSS7 791 aa14.43□□□□□ -0.1
HERC1-205ENST00000559886 GPC2Q8N158 579 aa14.43□□□□□ -0.1
HERC1-205ENST00000559886 IDI2Q9BXS1 227 aa14.43□□□□□ -0.1
HERC1-205ENST00000559886 RNF41Q9H4P4 317 aaPredicted RBP14.43□□□□□ -0.1
HERC1-205ENST00000559886 DDX4Q9NQI0 724 aaKnown RBP14.43□□□□□ -0.1
HERC1-205ENST00000559886 NPM3O75607 178 aaKnown RBP14.43□□□□□ -0.1
HERC1-205ENST00000559886 FGRP09769 529 aa14.43□□□□□ -0.1
HERC1-205ENST00000559886 CYP2D6P10635 497 aa14.43□□□□□ -0.1
HERC1-205ENST00000559886 EXOSC10Q01780 885 aaKnown RBP14.43□□□□□ -0.1
HERC1-205ENST00000559886 C9orf131Q5VYM1 1079 aa14.43□□□□□ -0.1
HERC1-205ENST00000559886 RALYLQ86SE5 291 aaKnown RBP14.43□□□□□ -0.1
HERC1-205ENST00000559886 AMOTL1Q8IY63 956 aa14.43□□□□□ -0.1
HERC1-205ENST00000559886 MB21D2Q8IYB1 491 aaPredicted RBP14.43□□□□□ -0.1
HERC1-205ENST00000559886 ZBED3Q96IU2 234 aaPredicted RBP14.43□□□□□ -0.1
HERC1-205ENST00000559886 TDRD3Q9H7E2 651 aaKnown RBP14.43□□□□□ -0.1
HERC1-205ENST00000559886 CNNM2Q9H8M5 875 aa14.43□□□□□ -0.1
HERC1-205ENST00000559886 NEDD4P46934 1319 aa14.43□□□□□ -0.1
HERC1-205ENST00000559886 PCP11498 1178 aaKnown RBP14.42□□□□□ -0.1
HERC1-205ENST00000559886 EVX2Q03828 476 aa14.42□□□□□ -0.1
HERC1-205ENST00000559886 NFIAQ12857 509 aa14.42□□□□□ -0.1
HERC1-205ENST00000559886 PICALMQ13492 652 aa14.42□□□□□ -0.1
HERC1-205ENST00000559886 MYOZ2Q9NPC6 264 aa14.42□□□□□ -0.1
HERC1-205ENST00000559886 INCENPQ9NQS7 918 aa14.42□□□□□ -0.1
HERC1-205ENST00000559886 SAP30BPQ9UHR5 308 aaKnown RBP14.42□□□□□ -0.1
HERC1-205ENST00000559886 ROBO3Q96MS0 1386 aa14.42□□□□□ -0.1
HERC1-205ENST00000559886 SHTN1A0MZ66 631 aa14.42□□□□□ -0.1
HERC1-205ENST00000559886 K7ELQ4 463 aaPredicted RBP14.42□□□□□ -0.1
HERC1-205ENST00000559886 AK2P54819 239 aa14.42□□□□□ -0.1
HERC1-205ENST00000559886 KRT23Q9C075 422 aa14.42□□□□□ -0.1
HERC1-205ENST00000559886 OSBPL5Q9H0X9 879 aaPredicted RBP14.42□□□□□ -0.1
HERC1-205ENST00000559886 POLR3DP05423 398 aaPredicted RBP14.41□□□□□ -0.1
HERC1-205ENST00000559886 SLC3A2P08195 630 aaKnown RBP14.41□□□□□ -0.1
HERC1-205ENST00000559886 MCM5P33992 734 aa14.41□□□□□ -0.1
HERC1-205ENST00000559886 MICALL2Q8IY33 904 aa14.41□□□□□ -0.1
HERC1-205ENST00000559886 TCEANC2Q96MN5 208 aa14.41□□□□□ -0.1
HERC1-205ENST00000559886 CNOT7Q9UIV1 285 aaKnown RBP14.41□□□□□ -0.1
HERC1-205ENST00000559886 WDR19Q8NEZ3 1342 aa14.41□□□□□ -0.1
HERC1-205ENST00000559886 B4E1Z4 1266 aa14.41□□□□□ -0.1
HERC1-205ENST00000559886 PLCD1P51178 756 aa14.41□□□□□ -0.1
HERC1-205ENST00000559886 CACNB3P54284 484 aa14.41□□□□□ -0.1
HERC1-205ENST00000559886 NKX2-3Q8TAU0 364 aa14.41□□□□□ -0.1
HERC1-205ENST00000559886 FAM198AQ9UFP1 575 aa14.41□□□□□ -0.1
HERC1-205ENST00000559886 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.41□□□□□ -0.1
HERC1-205ENST00000559886 WNT10BO00744 389 aa14.4□□□□□ -0.1
HERC1-205ENST00000559886 SLC4A3P48751 1232 aa14.4□□□□□ -0.1
HERC1-205ENST00000559886 SLC4A8Q2Y0W8 1093 aa14.4□□□□□ -0.1
HERC1-205ENST00000559886 SPDYE2Q495Y8 402 aa14.4□□□□□ -0.1
HERC1-205ENST00000559886 STK11IPQ8N1F8 1099 aa14.4□□□□□ -0.1
HERC1-205ENST00000559886 FBXL16Q8N461 479 aa14.4□□□□□ -0.1
HERC1-205ENST00000559886 ZNF70Q9UC06 446 aaPredicted RBP14.4□□□□□ -0.1
HERC1-205ENST00000559886 DAXXQ9UER7 740 aaPredicted RBP14.4□□□□□ -0.1
HERC1-205ENST00000559886 ORC4O43929 436 aa14.4□□□□□ -0.1
HERC1-205ENST00000559886 ANTXR2P58335 489 aa14.4□□□□□ -0.1
HERC1-205ENST00000559886 TOB2Q14106 344 aaPredicted RBP14.4□□□□□ -0.1
HERC1-205ENST00000559886 ANKRD1Q15327 319 aa14.4□□□□□ -0.1
HERC1-205ENST00000559886 AGXT2Q9BYV1 514 aa14.4□□□□□ -0.1
HERC1-205ENST00000559886 TMOD2Q9NZR1 351 aa14.4□□□□□ -0.1
HERC1-205ENST00000559886 ZSWIM5Q9P217 1185 aa14.4□□□□□ -0.1
HERC1-205ENST00000559886 MYH8P13535 1937 aa14.4□□□□□ -0.1
HERC1-205ENST00000559886 PRC1O43663 620 aa14.39□□□□□ -0.11
HERC1-205ENST00000559886 ENTPD3O75355 529 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms