RNA–Protein interactions for RNA: ENST00000559551.5

RABGGTA-209, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 2,060 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-209ENST00000559551 ANAPC4Q9UJX5 808 aa16.95■□□□□ 0.3
RABGGTA-209ENST00000559551 PSMD14O00487 310 aa16.94■□□□□ 0.3
RABGGTA-209ENST00000559551 USP17L8P0C7I0 530 aa16.94■□□□□ 0.3
RABGGTA-209ENST00000559551 APOBEC3HQ6NTF7 200 aaKnown RBP16.94■□□□□ 0.3
RABGGTA-209ENST00000559551 STK11IPQ8N1F8 1099 aa16.94■□□□□ 0.3
RABGGTA-209ENST00000559551 TGFBRAP1Q8WUH2 860 aa16.94■□□□□ 0.3
RABGGTA-209ENST00000559551 GMLQ99445 158 aa16.94■□□□□ 0.3
RABGGTA-209ENST00000559551 LIMCH1Q9UPQ0 1083 aa16.94■□□□□ 0.3
RABGGTA-209ENST00000559551 MINDY4BA8MYZ0 360 aa16.93■□□□□ 0.3
RABGGTA-209ENST00000559551 BAG3O95817 575 aa16.93■□□□□ 0.3
RABGGTA-209ENST00000559551 CRKP46108 304 aa16.93■□□□□ 0.3
RABGGTA-209ENST00000559551 ME3Q16798 604 aa16.93■□□□□ 0.3
RABGGTA-209ENST00000559551 HHIPL2Q6UWX4 724 aa16.93■□□□□ 0.3
RABGGTA-209ENST00000559551 IL27Q8NEV9 243 aa16.93■□□□□ 0.3
RABGGTA-209ENST00000559551 STAG1Q8WVM7 1258 aa16.93■□□□□ 0.3
RABGGTA-209ENST00000559551 LTBP3Q9NS15 1303 aa16.93■□□□□ 0.3
RABGGTA-209ENST00000559551 SIPA1L1O43166 1804 aa16.93■□□□□ 0.3
RABGGTA-209ENST00000559551 B4E1Z4 1266 aa16.93■□□□□ 0.3
RABGGTA-209ENST00000559551 VIL1P09327 827 aaKnown RBP16.93■□□□□ 0.3
RABGGTA-209ENST00000559551 AKNAD1Q5T1N1 836 aa16.93■□□□□ 0.3
RABGGTA-209ENST00000559551 NCOA7Q8NI08 942 aa16.93■□□□□ 0.3
RABGGTA-209ENST00000559551 ZNRF3Q9ULT6 936 aa16.93■□□□□ 0.3
RABGGTA-209ENST00000559551 DTNBO60941 627 aa16.92■□□□□ 0.3
RABGGTA-209ENST00000559551 HMGB1P09429 215 aaKnown RBP16.92■□□□□ 0.3
RABGGTA-209ENST00000559551 SLC4A8Q2Y0W8 1093 aa16.92■□□□□ 0.3
RABGGTA-209ENST00000559551 SBK1Q52WX2 424 aa16.92■□□□□ 0.3
RABGGTA-209ENST00000559551 MAPKAPK5Q8IW41 473 aa16.92■□□□□ 0.3
RABGGTA-209ENST00000559551 CXCL9Q07325 125 aa16.92■□□□□ 0.3
RABGGTA-209ENST00000559551 RSBN1LQ6PCB5 846 aaPredicted RBP16.92■□□□□ 0.3
RABGGTA-209ENST00000559551 SLF2Q8IX21 1173 aa16.92■□□□□ 0.3
RABGGTA-209ENST00000559551 NIM1KQ8IY84 436 aa16.92■□□□□ 0.3
RABGGTA-209ENST00000559551 TEX11Q8IYF3 940 aa16.92■□□□□ 0.3
RABGGTA-209ENST00000559551 SYT17Q9BSW7 474 aa16.92■□□□□ 0.3
RABGGTA-209ENST00000559551 DDX4Q9NQI0 724 aaKnown RBP16.92■□□□□ 0.3
RABGGTA-209ENST00000559551 ZBTB12Q9Y330 459 aaPredicted RBP16.92■□□□□ 0.3
RABGGTA-209ENST00000559551 FLT1P17948 1338 aa16.91■□□□□ 0.3
RABGGTA-209ENST00000559551 WDHD1O75717 1129 aaPredicted RBP16.91■□□□□ 0.3
RABGGTA-209ENST00000559551 FGRP09769 529 aa16.91■□□□□ 0.3
RABGGTA-209ENST00000559551 CDC42EP5Q6NZY7 148 aa16.91■□□□□ 0.3
RABGGTA-209ENST00000559551 BRF1Q92994 677 aa16.91■□□□□ 0.3
RABGGTA-209ENST00000559551 TEKT1Q969V4 418 aa16.91■□□□□ 0.3
RABGGTA-209ENST00000559551 ZDHHC15Q96MV8 337 aa16.91■□□□□ 0.3
RABGGTA-209ENST00000559551 MRIQ9BWK5 157 aa16.91■□□□□ 0.3
RABGGTA-209ENST00000559551 MCM9Q9NXL9 1143 aa16.91■□□□□ 0.3
RABGGTA-209ENST00000559551 PRC1O43663 620 aa16.9■□□□□ 0.3
RABGGTA-209ENST00000559551 USP5P45974 858 aa16.9■□□□□ 0.3
RABGGTA-209ENST00000559551 NOL10Q9BSC4 688 aaKnown RBP16.9■□□□□ 0.3
RABGGTA-209ENST00000559551 SENP2Q9HC62 589 aa16.9■□□□□ 0.3
RABGGTA-209ENST00000559551 ZSWIM5Q9P217 1185 aa16.9■□□□□ 0.3
RABGGTA-209ENST00000559551 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.9■□□□□ 0.3
RABGGTA-209ENST00000559551 MYH8P13535 1937 aa16.9■□□□□ 0.3
RABGGTA-209ENST00000559551 HDLBPQ00341 1268 aaKnown RBP16.9■□□□□ 0.3
RABGGTA-209ENST00000559551 C12orf60Q5U649 245 aa16.9■□□□□ 0.3
RABGGTA-209ENST00000559551 FBXL16Q8N461 479 aa16.9■□□□□ 0.3
RABGGTA-209ENST00000559551 NECAB1Q8N987 351 aa16.9■□□□□ 0.3
RABGGTA-209ENST00000559551 ARPP21Q9UBL0 812 aaPredicted RBP16.9■□□□□ 0.3
RABGGTA-209ENST00000559551 SAP30BPQ9UHR5 308 aaKnown RBP16.9■□□□□ 0.3
RABGGTA-209ENST00000559551 KDM4AO75164 1064 aa16.89■□□□□ 0.29
RABGGTA-209ENST00000559551 MCM5P33992 734 aa16.89■□□□□ 0.29
RABGGTA-209ENST00000559551 PLCD1P51178 756 aa16.89■□□□□ 0.29
RABGGTA-209ENST00000559551 APOBRQ0VD83 1088 aa16.89■□□□□ 0.29
RABGGTA-209ENST00000559551 MFSD6Q6ZSS7 791 aa16.89■□□□□ 0.29
RABGGTA-209ENST00000559551 RALYLQ86SE5 291 aaKnown RBP16.89■□□□□ 0.29
RABGGTA-209ENST00000559551 PLCG2P16885 1265 aa16.89■□□□□ 0.29
RABGGTA-209ENST00000559551 NFIAQ12857 509 aa16.89■□□□□ 0.29
RABGGTA-209ENST00000559551 CERS3Q8IU89 383 aa16.89■□□□□ 0.29
RABGGTA-209ENST00000559551 DYNLL2Q96FJ2 89 aa16.89■□□□□ 0.29
RABGGTA-209ENST00000559551 USP40Q9NVE5 1235 aa16.89■□□□□ 0.29
RABGGTA-209ENST00000559551 SERPINA10Q9UK55 444 aa16.89■□□□□ 0.29
RABGGTA-209ENST00000559551 ROBO3Q96MS0 1386 aa16.88■□□□□ 0.29
RABGGTA-209ENST00000559551 WDR19Q8NEZ3 1342 aa16.88■□□□□ 0.29
RABGGTA-209ENST00000559551 SHTN1A0MZ66 631 aa16.88■□□□□ 0.29
RABGGTA-209ENST00000559551 PRDM1O75626 825 aa16.88■□□□□ 0.29
RABGGTA-209ENST00000559551 BRPF3Q9ULD4 1205 aa16.88■□□□□ 0.29
RABGGTA-209ENST00000559551 CACNB3P54284 484 aa16.87■□□□□ 0.29
RABGGTA-209ENST00000559551 EVCP57679 992 aa16.87■□□□□ 0.29
RABGGTA-209ENST00000559551 ANKRD1Q15327 319 aa16.87■□□□□ 0.29
RABGGTA-209ENST00000559551 RRP12Q5JTH9 1297 aaKnown RBP16.87■□□□□ 0.29
RABGGTA-209ENST00000559551 CCDC83Q8IWF9 413 aa16.87■□□□□ 0.29
RABGGTA-209ENST00000559551 IGDCC4Q8TDY8 1250 aa16.87■□□□□ 0.29
RABGGTA-209ENST00000559551 PRMT6Q96LA8 375 aaPredicted RBP16.87■□□□□ 0.29
RABGGTA-209ENST00000559551 ZSCAN31Q96LW9 406 aaPredicted RBP16.87■□□□□ 0.29
RABGGTA-209ENST00000559551 SH2B2O14492 632 aaPredicted RBP16.87■□□□□ 0.29
RABGGTA-209ENST00000559551 HSP90AA1P07900 732 aaKnown RBP16.87■□□□□ 0.29
RABGGTA-209ENST00000559551 YBX3P16989 372 aaKnown RBP eCLIP16.87■□□□□ 0.29
RABGGTA-209ENST00000559551 TRDNQ13061 729 aa16.87■□□□□ 0.29
RABGGTA-209ENST00000559551 CFAP100Q494V2 611 aa16.87■□□□□ 0.29
RABGGTA-209ENST00000559551 ZFPM1Q8IX07 1006 aa16.87■□□□□ 0.29
RABGGTA-209ENST00000559551 INTS4Q96HW7 963 aaKnown RBP16.87■□□□□ 0.29
RABGGTA-209ENST00000559551 MYO3BQ8WXR4 1341 aa16.86■□□□□ 0.29
RABGGTA-209ENST00000559551 STK3Q13188 491 aa16.86■□□□□ 0.29
RABGGTA-209ENST00000559551 PICALMQ13492 652 aa16.86■□□□□ 0.29
RABGGTA-209ENST00000559551 SLC44A5Q8NCS7 719 aa16.86■□□□□ 0.29
RABGGTA-209ENST00000559551 JDP2Q8WYK2 163 aa16.86■□□□□ 0.29
RABGGTA-209ENST00000559551 ZKSCAN3Q9BRR0 538 aa16.86■□□□□ 0.29
RABGGTA-209ENST00000559551 KRT23Q9C075 422 aa16.86■□□□□ 0.29
RABGGTA-209ENST00000559551 CNNM2Q9H8M5 875 aa16.86■□□□□ 0.29
RABGGTA-209ENST00000559551 SH2B1Q9NRF2 756 aaPredicted RBP16.86■□□□□ 0.29
RABGGTA-209ENST00000559551 FZD9O00144 591 aa16.85■□□□□ 0.29
RABGGTA-209ENST00000559551 ORC4O43929 436 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms