RNA–Protein interactions for RNA: ENST00000558890.5

LRRC28-211, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 978 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-211ENST00000558890 DDX60LQ5H9U9 1706 aaKnown RBP9.14□□□□□ -0.95
LRRC28-211ENST00000558890 CDK5RAP2Q96SN8 1893 aa9.13□□□□□ -0.95
LRRC28-211ENST00000558890 ADM5C9JUS6 153 aa9.13□□□□□ -0.95
LRRC28-211ENST00000558890 GOLIM4O00461 696 aa9.13□□□□□ -0.95
LRRC28-211ENST00000558890 PLCG2P16885 1265 aa9.13□□□□□ -0.95
LRRC28-211ENST00000558890 ADD2P35612 726 aa9.13□□□□□ -0.95
LRRC28-211ENST00000558890 NT5C2P49902 561 aa9.13□□□□□ -0.95
LRRC28-211ENST00000558890 DLGAP5Q15398 846 aa9.13□□□□□ -0.95
LRRC28-211ENST00000558890 DIXDC1Q155Q3 683 aa9.13□□□□□ -0.95
LRRC28-211ENST00000558890 KRT26Q7Z3Y9 468 aa9.13□□□□□ -0.95
LRRC28-211ENST00000558890 APPBP2Q92624 585 aa9.13□□□□□ -0.95
LRRC28-211ENST00000558890 NSUN4Q96CB9 384 aaKnown RBP9.13□□□□□ -0.95
LRRC28-211ENST00000558890 TEPSINQ96N21 525 aa9.13□□□□□ -0.95
LRRC28-211ENST00000558890 DNAJC2Q99543 621 aaKnown RBP9.13□□□□□ -0.95
LRRC28-211ENST00000558890 PIH1D3Q9NQM4 214 aaKnown RBP9.13□□□□□ -0.95
LRRC28-211ENST00000558890 HELLSQ9NRZ9 838 aa9.13□□□□□ -0.95
LRRC28-211ENST00000558890 LRP2BPQ9P2M1 347 aa9.13□□□□□ -0.95
LRRC28-211ENST00000558890 ZNF70Q9UC06 446 aaPredicted RBP9.13□□□□□ -0.95
LRRC28-211ENST00000558890 DAGLAQ9Y4D2 1042 aa9.13□□□□□ -0.95
LRRC28-211ENST00000558890 NDUFB9Q9Y6M9 179 aa9.13□□□□□ -0.95
LRRC28-211ENST00000558890 LAMA4Q16363 1823 aa9.12□□□□□ -0.95
LRRC28-211ENST00000558890 MROH7-TTC4A0A0A0MT08 1334 aa9.12□□□□□ -0.95
LRRC28-211ENST00000558890 ZMYM6O95789 1325 aa9.12□□□□□ -0.95
LRRC28-211ENST00000558890 TCRBV5S4A2TA0A5A2 114 aa9.12□□□□□ -0.95
LRRC28-211ENST00000558890 RNF113AO15541 343 aaKnown RBP9.12□□□□□ -0.95
LRRC28-211ENST00000558890 SGSM2O43147 1006 aa9.12□□□□□ -0.95
LRRC28-211ENST00000558890 GNAT2P19087 354 aa9.12□□□□□ -0.95
LRRC28-211ENST00000558890 NEK4P51957 841 aa9.12□□□□□ -0.95
LRRC28-211ENST00000558890 RHBDL3P58872 404 aa9.12□□□□□ -0.95
LRRC28-211ENST00000558890 PPP4CP60510 307 aa9.12□□□□□ -0.95
LRRC28-211ENST00000558890 MECOMQ03112 1051 aa9.12□□□□□ -0.95
LRRC28-211ENST00000558890 ZMYM1Q5SVZ6 1142 aa9.12□□□□□ -0.95
LRRC28-211ENST00000558890 FKBP1CQ5VVH2 108 aa9.12□□□□□ -0.95
LRRC28-211ENST00000558890 PRAMEF18Q5VWM3 479 aa9.12□□□□□ -0.95
LRRC28-211ENST00000558890 CLEC17AQ6ZS10 378 aa9.12□□□□□ -0.95
LRRC28-211ENST00000558890 DZIP1Q86YF9 867 aaKnown RBP9.12□□□□□ -0.95
LRRC28-211ENST00000558890 TEKT1Q969V4 418 aa9.12□□□□□ -0.95
LRRC28-211ENST00000558890 IL17RAQ96F46 866 aa9.12□□□□□ -0.95
LRRC28-211ENST00000558890 FSD1Q9BTV5 496 aa9.12□□□□□ -0.95
LRRC28-211ENST00000558890 TDRD3Q9H7E2 651 aaKnown RBP9.12□□□□□ -0.95
LRRC28-211ENST00000558890 CREBZFQ9NS37 354 aa9.12□□□□□ -0.95
LRRC28-211ENST00000558890 LAMB1P07942 1786 aa9.12□□□□□ -0.95
LRRC28-211ENST00000558890 GPR75-ASB3A0A0A6YYF3 556 aa9.11□□□□□ -0.95
LRRC28-211ENST00000558890 TMEM88BA6NKF7 163 aa9.11□□□□□ -0.95
LRRC28-211ENST00000558890 IDH1O75874 414 aaKnown RBP9.11□□□□□ -0.95
LRRC28-211ENST00000558890 BAG3O95817 575 aa9.11□□□□□ -0.95
LRRC28-211ENST00000558890 PDE6AP16499 860 aa9.11□□□□□ -0.95
LRRC28-211ENST00000558890 HSPA4P34932 840 aa9.11□□□□□ -0.95
LRRC28-211ENST00000558890 SLC9C2Q5TAH2 1124 aa9.11□□□□□ -0.95
LRRC28-211ENST00000558890 NAA16Q6N069 864 aaPredicted RBP9.11□□□□□ -0.95
LRRC28-211ENST00000558890 CDC42EP5Q6NZY7 148 aa9.11□□□□□ -0.95
LRRC28-211ENST00000558890 GIMAP6Q6P9H5 292 aa9.11□□□□□ -0.95
LRRC28-211ENST00000558890 CDAN1Q8IWY9 1227 aa9.11□□□□□ -0.95
LRRC28-211ENST00000558890 DCPSQ96C86 337 aaKnown RBP9.11□□□□□ -0.95
LRRC28-211ENST00000558890 CDCA5Q96FF9 252 aa9.11□□□□□ -0.95
LRRC28-211ENST00000558890 GZF1Q9H116 711 aaPredicted RBP9.11□□□□□ -0.95
LRRC28-211ENST00000558890 DEFB129Q9H1M3 183 aa9.11□□□□□ -0.95
LRRC28-211ENST00000558890 ABCF2Q9UG63 623 aa9.11□□□□□ -0.95
LRRC28-211ENST00000558890 CNTNAP1P78357 1384 aa9.11□□□□□ -0.95
LRRC28-211ENST00000558890 CLRN2A0PK11 232 aa9.1□□□□□ -0.95
LRRC28-211ENST00000558890 RASSF10A6NK89 507 aa9.1□□□□□ -0.95
LRRC28-211ENST00000558890 WDHD1O75717 1129 aaPredicted RBP9.1□□□□□ -0.95
LRRC28-211ENST00000558890 CELF2O95319 508 aaKnown RBP9.1□□□□□ -0.95
LRRC28-211ENST00000558890 BAG4O95429 457 aaKnown RBP9.1□□□□□ -0.95
LRRC28-211ENST00000558890 MRE11P49959 708 aa9.1□□□□□ -0.95
LRRC28-211ENST00000558890 ADGRA1Q86SQ6 560 aa9.1□□□□□ -0.95
LRRC28-211ENST00000558890 SAPCD2Q86UD0 394 aa9.1□□□□□ -0.95
LRRC28-211ENST00000558890 ZFPM1Q8IX07 1006 aa9.1□□□□□ -0.95
LRRC28-211ENST00000558890 EDC3Q96F86 508 aaKnown RBP9.1□□□□□ -0.95
LRRC28-211ENST00000558890 INTS4Q96HW7 963 aaKnown RBP9.1□□□□□ -0.95
LRRC28-211ENST00000558890 TMX3Q96JJ7 454 aa9.1□□□□□ -0.95
LRRC28-211ENST00000558890 NOL10Q9BSC4 688 aaKnown RBP9.1□□□□□ -0.95
LRRC28-211ENST00000558890 RAI14Q9P0K7 980 aa9.1□□□□□ -0.95
LRRC28-211ENST00000558890 FAM198AQ9UFP1 575 aa9.1□□□□□ -0.95
LRRC28-211ENST00000558890 BRPF3Q9ULD4 1205 aa9.1□□□□□ -0.95
LRRC28-211ENST00000558890 TLL2Q9Y6L7 1015 aa9.1□□□□□ -0.95
LRRC28-211ENST00000558890 NAV1Q8NEY1 1877 aa9.1□□□□□ -0.95
LRRC28-211ENST00000558890 FSD2A1L4K1 749 aa9.09□□□□□ -0.95
LRRC28-211ENST00000558890 CACNB3P54284 484 aa9.09□□□□□ -0.95
LRRC28-211ENST00000558890 MAP3K10Q02779 954 aa9.09□□□□□ -0.95
LRRC28-211ENST00000558890 NFIAQ12857 509 aa9.09□□□□□ -0.95
LRRC28-211ENST00000558890 CUL4AQ13619 759 aa9.09□□□□□ -0.95
LRRC28-211ENST00000558890 RASA3Q14644 834 aa9.09□□□□□ -0.95
LRRC28-211ENST00000558890 MAP3K11Q16584 847 aa9.09□□□□□ -0.95
LRRC28-211ENST00000558890 MCMDC2Q4G0Z9 681 aa9.09□□□□□ -0.95
LRRC28-211ENST00000558890 LDLRAD1Q5T700 205 aa9.09□□□□□ -0.95
LRRC28-211ENST00000558890 NBPF12Q5TAG4 269 aaPredicted RBP9.09□□□□□ -0.95
LRRC28-211ENST00000558890 SH3BP5LQ7L8J4 393 aa9.09□□□□□ -0.95
LRRC28-211ENST00000558890 SULF1Q8IWU6 871 aa9.09□□□□□ -0.95
LRRC28-211ENST00000558890 RIOK1Q9BRS2 568 aaKnown RBP9.09□□□□□ -0.95
LRRC28-211ENST00000558890 IDI2Q9BXS1 227 aa9.09□□□□□ -0.95
LRRC28-211ENST00000558890 DDX4Q9NQI0 724 aaKnown RBP9.09□□□□□ -0.95
LRRC28-211ENST00000558890 PALD1Q9ULE6 856 aa9.09□□□□□ -0.95
LRRC28-211ENST00000558890 PPP2R3BQ9Y5P8 575 aa9.09□□□□□ -0.95
LRRC28-211ENST00000558890 ZNF532Q9HCE3 1301 aa9.08□□□□□ -0.96
LRRC28-211ENST00000558890 SSC5DA1L4H1 1573 aa9.08□□□□□ -0.96
LRRC28-211ENST00000558890 MYO1BO43795 1136 aa9.08□□□□□ -0.96
LRRC28-211ENST00000558890 USP2O75604 605 aaPredicted RBP9.08□□□□□ -0.96
LRRC28-211ENST00000558890 CHGBP05060 677 aa9.08□□□□□ -0.96
LRRC28-211ENST00000558890 RBM5P52756 815 aaKnown RBP eCLIP9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms