RNA–Protein interactions for RNA: ENST00000558635.1

PSMA4-207, Transcript of proteasome subunit alpha 4, humanhuman

TSL 1 (best)

Gene PSMA4, Length 736 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA4-207ENST00000558635 ZNF710Q8N1W2 664 aa12.58□□□□□ -0.4
PSMA4-207ENST00000558635 KBTBD3Q8NAB2 608 aa12.58□□□□□ -0.4
PSMA4-207ENST00000558635 RBM46Q8TBY0 533 aaKnown RBP12.58□□□□□ -0.4
PSMA4-207ENST00000558635 DCPSQ96C86 337 aaKnown RBP12.58□□□□□ -0.4
PSMA4-207ENST00000558635 PLSCR2Q9NRY7 297 aa12.58□□□□□ -0.4
PSMA4-207ENST00000558635 GGA3Q9NZ52 723 aa12.58□□□□□ -0.4
PSMA4-207ENST00000558635 ZNF70Q9UC06 446 aaPredicted RBP12.58□□□□□ -0.4
PSMA4-207ENST00000558635 GPR75-ASB3A0A0A6YYF3 556 aa12.57□□□□□ -0.4
PSMA4-207ENST00000558635 TRIM6-TRIM34B2RNG4 842 aa12.57□□□□□ -0.4
PSMA4-207ENST00000558635 MYO1BO43795 1136 aa12.57□□□□□ -0.4
PSMA4-207ENST00000558635 BTDP43251 543 aa12.57□□□□□ -0.4
PSMA4-207ENST00000558635 PLCB2Q00722 1185 aa12.57□□□□□ -0.4
PSMA4-207ENST00000558635 SLFNL1Q499Z3 407 aa12.57□□□□□ -0.4
PSMA4-207ENST00000558635 ZSCAN25Q6NSZ9 544 aa12.57□□□□□ -0.4
PSMA4-207ENST00000558635 CDC42EP5Q6NZY7 148 aa12.57□□□□□ -0.4
PSMA4-207ENST00000558635 ADGRA1Q86SQ6 560 aa12.57□□□□□ -0.4
PSMA4-207ENST00000558635 EVI5LQ96CN4 794 aa12.57□□□□□ -0.4
PSMA4-207ENST00000558635 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.57□□□□□ -0.4
PSMA4-207ENST00000558635 VEZTQ9HBM0 779 aa12.57□□□□□ -0.4
PSMA4-207ENST00000558635 USP40Q9NVE5 1235 aa12.57□□□□□ -0.4
PSMA4-207ENST00000558635 SCAF8Q9UPN6 1271 aaKnown RBP12.57□□□□□ -0.4
PSMA4-207ENST00000558635 ZNF532Q9HCE3 1301 aa12.57□□□□□ -0.4
PSMA4-207ENST00000558635 TCRBV5S4A2TA0A5A2 114 aa12.56□□□□□ -0.4
PSMA4-207ENST00000558635 CHGBP05060 677 aa12.56□□□□□ -0.4
PSMA4-207ENST00000558635 ADD2P35612 726 aa12.56□□□□□ -0.4
PSMA4-207ENST00000558635 TTC22Q5TAA0 569 aa12.56□□□□□ -0.4
PSMA4-207ENST00000558635 TMED8Q6PL24 325 aaPredicted RBP12.56□□□□□ -0.4
PSMA4-207ENST00000558635 USP48Q86UV5 1035 aa12.56□□□□□ -0.4
PSMA4-207ENST00000558635 CNTROBQ8N137 903 aa12.56□□□□□ -0.4
PSMA4-207ENST00000558635 SMC1BQ8NDV3 1235 aa12.56□□□□□ -0.4
PSMA4-207ENST00000558635 RILPL2Q969X0 211 aa12.56□□□□□ -0.4
PSMA4-207ENST00000558635 FSD1Q9BTV5 496 aa12.56□□□□□ -0.4
PSMA4-207ENST00000558635 GLIS2Q9BZE0 524 aaPredicted RBP12.56□□□□□ -0.4
PSMA4-207ENST00000558635 PITPNM2Q9BZ72 1349 aa12.56□□□□□ -0.4
PSMA4-207ENST00000558635 ADAMTSL1Q8N6G6 1762 aa12.56□□□□□ -0.4
PSMA4-207ENST00000558635 ADM5C9JUS6 153 aa12.55□□□□□ -0.4
PSMA4-207ENST00000558635 RNF113AO15541 343 aaKnown RBP12.55□□□□□ -0.4
PSMA4-207ENST00000558635 PPP1R37O75864 691 aa12.55□□□□□ -0.4
PSMA4-207ENST00000558635 BAG3O95817 575 aa12.55□□□□□ -0.4
PSMA4-207ENST00000558635 GSPT1P15170 499 aaKnown RBP12.55□□□□□ -0.4
PSMA4-207ENST00000558635 RGS3P49796 1198 aa12.55□□□□□ -0.4
PSMA4-207ENST00000558635 CACNB3P54284 484 aa12.55□□□□□ -0.4
PSMA4-207ENST00000558635 EMP3P54852 163 aa12.55□□□□□ -0.4
PSMA4-207ENST00000558635 PPP4CP60510 307 aa12.55□□□□□ -0.4
PSMA4-207ENST00000558635 DYNLL1P63167 89 aaKnown RBP12.55□□□□□ -0.4
PSMA4-207ENST00000558635 UBE3CQ15386 1083 aa12.55□□□□□ -0.4
PSMA4-207ENST00000558635 DLK2Q6UY11 383 aa12.55□□□□□ -0.4
PSMA4-207ENST00000558635 CDC37L1Q7L3B6 337 aa12.55□□□□□ -0.4
PSMA4-207ENST00000558635 KRT26Q7Z3Y9 468 aa12.55□□□□□ -0.4
PSMA4-207ENST00000558635 APOBEC3FQ8IUX4 373 aaKnown RBP12.55□□□□□ -0.4
PSMA4-207ENST00000558635 MIGA1Q8NAN2 632 aa12.55□□□□□ -0.4
PSMA4-207ENST00000558635 NOL10Q9BSC4 688 aaKnown RBP12.55□□□□□ -0.4
PSMA4-207ENST00000558635 AATFQ9NY61 560 aaKnown RBP eCLIP12.55□□□□□ -0.4
PSMA4-207ENST00000558635 TMOD2Q9NZR1 351 aa12.55□□□□□ -0.4
PSMA4-207ENST00000558635 TCP10L2B9ZVM9 353 aa12.54□□□□□ -0.4
PSMA4-207ENST00000558635 ITGBL1O95965 494 aaPredicted RBP12.54□□□□□ -0.4
PSMA4-207ENST00000558635 ZFYP08048 801 aaPredicted RBP12.54□□□□□ -0.4
PSMA4-207ENST00000558635 RHBDL3P58872 404 aa12.54□□□□□ -0.4
PSMA4-207ENST00000558635 FSTL1Q12841 308 aa12.54□□□□□ -0.4
PSMA4-207ENST00000558635 LRRFIP1Q32MZ4 808 aaKnown RBP12.54□□□□□ -0.4
PSMA4-207ENST00000558635 SULF1Q8IWU6 871 aa12.54□□□□□ -0.4
PSMA4-207ENST00000558635 SH3RF3Q8TEJ3 882 aaPredicted RBP12.54□□□□□ -0.4
PSMA4-207ENST00000558635 MYO5AQ9Y4I1 1855 aaKnown RBP12.54□□□□□ -0.4
PSMA4-207ENST00000558635 DOCK2Q92608 1830 aa12.53□□□□□ -0.4
PSMA4-207ENST00000558635 MYH2Q9UKX2 1941 aa12.53□□□□□ -0.4
PSMA4-207ENST00000558635 MAGEB6P1A0A0J9YX57 407 aa12.53□□□□□ -0.4
PSMA4-207ENST00000558635 TRAF5O00463 557 aa12.53□□□□□ -0.4
PSMA4-207ENST00000558635 SDSP20132 328 aa12.53□□□□□ -0.4
PSMA4-207ENST00000558635 FMR1Q06787 632 aaKnown RBP eCLIP12.53□□□□□ -0.4
PSMA4-207ENST00000558635 NFIAQ12857 509 aa12.53□□□□□ -0.4
PSMA4-207ENST00000558635 RASA3Q14644 834 aa12.53□□□□□ -0.4
PSMA4-207ENST00000558635 FKBP1CQ5VVH2 108 aa12.53□□□□□ -0.4
PSMA4-207ENST00000558635 TEX11Q8IYF3 940 aa12.53□□□□□ -0.4
PSMA4-207ENST00000558635 DEFB129Q9H1M3 183 aa12.53□□□□□ -0.4
PSMA4-207ENST00000558635 GTF3C3Q9Y5Q9 886 aa12.53□□□□□ -0.4
PSMA4-207ENST00000558635 MAST2Q6P0Q8 1798 aa12.53□□□□□ -0.4
PSMA4-207ENST00000558635 WDHD1O75717 1129 aaPredicted RBP12.52□□□□□ -0.41
PSMA4-207ENST00000558635 TNFAIP1Q13829 316 aa12.52□□□□□ -0.41
PSMA4-207ENST00000558635 PRAMEF18Q5VWM3 479 aa12.52□□□□□ -0.41
PSMA4-207ENST00000558635 CERS3Q8IU89 383 aa12.52□□□□□ -0.41
PSMA4-207ENST00000558635 APPBP2Q92624 585 aa12.52□□□□□ -0.41
PSMA4-207ENST00000558635 OSBP2Q969R2 916 aa12.52□□□□□ -0.41
PSMA4-207ENST00000558635 RIOK1Q9BRS2 568 aaKnown RBP12.52□□□□□ -0.41
PSMA4-207ENST00000558635 IDI2Q9BXS1 227 aa12.52□□□□□ -0.41
PSMA4-207ENST00000558635 PUS7LQ9H0K6 701 aaKnown RBP12.52□□□□□ -0.41
PSMA4-207ENST00000558635 ARMT1Q9H993 441 aa12.52□□□□□ -0.41
PSMA4-207ENST00000558635 FAM198AQ9UFP1 575 aa12.52□□□□□ -0.41
PSMA4-207ENST00000558635 CNTNAP1P78357 1384 aa12.52□□□□□ -0.41
PSMA4-207ENST00000558635 MBD4O95243 580 aa12.51□□□□□ -0.41
PSMA4-207ENST00000558635 TNNI2P48788 182 aa12.51□□□□□ -0.41
PSMA4-207ENST00000558635 TCP10Q12799 353 aa12.51□□□□□ -0.41
PSMA4-207ENST00000558635 PICALMQ13492 652 aa12.51□□□□□ -0.41
PSMA4-207ENST00000558635 ZMYM1Q5SVZ6 1142 aa12.51□□□□□ -0.41
PSMA4-207ENST00000558635 FAM83AQ86UY5 434 aa12.51□□□□□ -0.41
PSMA4-207ENST00000558635 TICAM2Q86XR7 235 aa12.51□□□□□ -0.41
PSMA4-207ENST00000558635 ZFPM1Q8IX07 1006 aa12.51□□□□□ -0.41
PSMA4-207ENST00000558635 LCORLQ8N3X6 602 aa12.51□□□□□ -0.41
PSMA4-207ENST00000558635 CDCA5Q96FF9 252 aa12.51□□□□□ -0.41
PSMA4-207ENST00000558635 SEC62Q99442 399 aaKnown RBP12.51□□□□□ -0.41
PSMA4-207ENST00000558635 TMEM39BQ9GZU3 492 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms