RNA–Protein interactions for RNA: ENST00000558248.5

LRRC28-205, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 499 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-205ENST00000558248 FAM8A1Q9UBU6 413 aa6.03□□□□□ -1.44
LRRC28-205ENST00000558248 PBRM1Q86U86 1689 aa6.03□□□□□ -1.44
LRRC28-205ENST00000558248 SYNGAP1Q96PV0 1343 aa6.02□□□□□ -1.45
LRRC28-205ENST00000558248 ANKRD33BA6NCL7 494 aa6.02□□□□□ -1.45
LRRC28-205ENST00000558248 AOC2O75106 756 aa6.02□□□□□ -1.45
LRRC28-205ENST00000558248 PRPF40AO75400 957 aaKnown RBP6.02□□□□□ -1.45
LRRC28-205ENST00000558248 GSTP1P09211 210 aaKnown RBP6.02□□□□□ -1.45
LRRC28-205ENST00000558248 RAB6AP20340 208 aa6.02□□□□□ -1.45
LRRC28-205ENST00000558248 GRIK1P39086 918 aa6.02□□□□□ -1.45
LRRC28-205ENST00000558248 NFKBIBQ15653 356 aa6.02□□□□□ -1.45
LRRC28-205ENST00000558248 EAPPQ56P03 285 aaPredicted RBP6.02□□□□□ -1.45
LRRC28-205ENST00000558248 C2CD4AQ8NCU7 369 aaPredicted RBP6.02□□□□□ -1.45
LRRC28-205ENST00000558248 C12orf49Q9H741 205 aa6.02□□□□□ -1.45
LRRC28-205ENST00000558248 KRT82Q9NSB4 513 aa6.02□□□□□ -1.45
LRRC28-205ENST00000558248 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.01□□□□□ -1.45
LRRC28-205ENST00000558248 ECEL1O95672 775 aa6.01□□□□□ -1.45
LRRC28-205ENST00000558248 CTSBP07858 339 aa6.01□□□□□ -1.45
LRRC28-205ENST00000558248 GNA15P30679 374 aa6.01□□□□□ -1.45
LRRC28-205ENST00000558248 MAP7Q14244 749 aa6.01□□□□□ -1.45
LRRC28-205ENST00000558248 ARTNQ5T4W7 220 aa6.01□□□□□ -1.45
LRRC28-205ENST00000558248 TPTE2Q6XPS3 522 aa6.01□□□□□ -1.45
LRRC28-205ENST00000558248 NBPF11Q86T75 865 aa6.01□□□□□ -1.45
LRRC28-205ENST00000558248 FBLIM1Q8WUP2 373 aa6.01□□□□□ -1.45
LRRC28-205ENST00000558248 KCNB2Q92953 911 aa6.01□□□□□ -1.45
LRRC28-205ENST00000558248 SETDB2Q96T68 719 aa6.01□□□□□ -1.45
LRRC28-205ENST00000558248 ZC3H12CQ9C0D7 883 aaKnown RBP6.01□□□□□ -1.45
LRRC28-205ENST00000558248 PIDD1Q9HB75 910 aa6.01□□□□□ -1.45
LRRC28-205ENST00000558248 CBX8Q9HC52 389 aa6.01□□□□□ -1.45
LRRC28-205ENST00000558248 WWC3Q9ULE0 1092 aa6.01□□□□□ -1.45
LRRC28-205ENST00000558248 ACTL7BQ9Y614 415 aa6.01□□□□□ -1.45
LRRC28-205ENST00000558248 CUX1P39880 1505 aa6□□□□□ -1.45
LRRC28-205ENST00000558248 NME2P22392 152 aa6□□□□□ -1.45
LRRC28-205ENST00000558248 EIF4BP23588 611 aaKnown RBP6□□□□□ -1.45
LRRC28-205ENST00000558248 ARNTP27540 789 aa6□□□□□ -1.45
LRRC28-205ENST00000558248 ASPAP45381 313 aa6□□□□□ -1.45
LRRC28-205ENST00000558248 XP32Q5T750 250 aa6□□□□□ -1.45
LRRC28-205ENST00000558248 C3orf58Q8NDZ4 430 aa6□□□□□ -1.45
LRRC28-205ENST00000558248 ACSBG1Q96GR2 724 aa6□□□□□ -1.45
LRRC28-205ENST00000558248 METTL22Q9BUU2 404 aaPredicted RBP6□□□□□ -1.45
LRRC28-205ENST00000558248 WDR18Q9BV38 432 aa6□□□□□ -1.45
LRRC28-205ENST00000558248 OSBPL7Q9BZF2 842 aa6□□□□□ -1.45
LRRC28-205ENST00000558248 ATXN3LQ9H3M9 355 aa6□□□□□ -1.45
LRRC28-205ENST00000558248 CCDC86Q9H6F5 360 aaKnown RBP6□□□□□ -1.45
LRRC28-205ENST00000558248 ATG3Q9NT62 314 aa6□□□□□ -1.45
LRRC28-205ENST00000558248 ADCY10Q96PN6 1610 aa5.99□□□□□ -1.45
LRRC28-205ENST00000558248 COBLO75128 1261 aa5.99□□□□□ -1.45
LRRC28-205ENST00000558248 USP17L7P0C7H9 530 aa5.99□□□□□ -1.45
LRRC28-205ENST00000558248 ERCC3P19447 782 aa5.99□□□□□ -1.45
LRRC28-205ENST00000558248 ITGAEP38570 1179 aa5.99□□□□□ -1.45
LRRC28-205ENST00000558248 ID3Q02535 119 aa5.99□□□□□ -1.45
LRRC28-205ENST00000558248 CPSF6Q16630 551 aaKnown RBP eCLIP5.99□□□□□ -1.45
LRRC28-205ENST00000558248 CDPF1Q6NVV7 123 aa5.99□□□□□ -1.45
LRRC28-205ENST00000558248 INTS5Q6P9B9 1019 aaKnown RBP5.99□□□□□ -1.45
LRRC28-205ENST00000558248 FBXL6Q8N531 539 aa5.99□□□□□ -1.45
LRRC28-205ENST00000558248 SHKBP1Q8TBC3 707 aa5.99□□□□□ -1.45
LRRC28-205ENST00000558248 EZH1Q92800 747 aaPredicted RBP5.99□□□□□ -1.45
LRRC28-205ENST00000558248 MFSD14AQ96MC6 490 aa5.99□□□□□ -1.45
LRRC28-205ENST00000558248 NECAB3Q96P71 396 aaPredicted RBP5.99□□□□□ -1.45
LRRC28-205ENST00000558248 OSBPL1AQ9BXW6 950 aa5.99□□□□□ -1.45
LRRC28-205ENST00000558248 PCMTD2Q9NV79 361 aa5.99□□□□□ -1.45
LRRC28-205ENST00000558248 WDR64B1ANS9 1081 aa5.98□□□□□ -1.45
LRRC28-205ENST00000558248 LIG1P18858 919 aa5.98□□□□□ -1.45
LRRC28-205ENST00000558248 LRRC14Q15048 493 aa5.98□□□□□ -1.45
LRRC28-205ENST00000558248 KIF4BQ2VIQ3 1234 aa5.98□□□□□ -1.45
LRRC28-205ENST00000558248 MAP1SQ66K74 1059 aaPredicted RBP5.98□□□□□ -1.45
LRRC28-205ENST00000558248 ZDHHC13Q8IUH4 622 aa5.98□□□□□ -1.45
LRRC28-205ENST00000558248 ANKRD24Q8TF21 1146 aa5.98□□□□□ -1.45
LRRC28-205ENST00000558248 TBC1D32Q96NH3 1257 aa5.98□□□□□ -1.45
LRRC28-205ENST00000558248 FAM105AQ9NUU6 356 aa5.98□□□□□ -1.45
LRRC28-205ENST00000558248 TTF2Q9UNY4 1162 aaKnown RBP5.98□□□□□ -1.45
LRRC28-205ENST00000558248 DAGLAQ9Y4D2 1042 aa5.98□□□□□ -1.45
LRRC28-205ENST00000558248 ABCA5Q8WWZ7 1642 aa5.98□□□□□ -1.45
LRRC28-205ENST00000558248 PPRC1Q5VV67 1664 aaKnown RBP5.98□□□□□ -1.45
LRRC28-205ENST00000558248 PPM1GO15355 546 aaPredicted RBP5.97□□□□□ -1.45
LRRC28-205ENST00000558248 FBXO24O75426 580 aa5.97□□□□□ -1.45
LRRC28-205ENST00000558248 TGFB1P01137 390 aa5.97□□□□□ -1.45
LRRC28-205ENST00000558248 NFICP08651 508 aa5.97□□□□□ -1.45
LRRC28-205ENST00000558248 LMNB1P20700 586 aa5.97□□□□□ -1.45
LRRC28-205ENST00000558248 SSTR4P31391 388 aa5.97□□□□□ -1.45
LRRC28-205ENST00000558248 CYP27A1Q02318 531 aa5.97□□□□□ -1.45
LRRC28-205ENST00000558248 LLGL2Q6P1M3 1020 aa5.97□□□□□ -1.45
LRRC28-205ENST00000558248 PDZD3Q86UT5 571 aa5.97□□□□□ -1.45
LRRC28-205ENST00000558248 DUSP9Q99956 384 aaKnown RBP5.97□□□□□ -1.45
LRRC28-205ENST00000558248 POLR3GLQ9BT43 218 aa5.97□□□□□ -1.45
LRRC28-205ENST00000558248 BCL11AQ9H165 835 aa5.97□□□□□ -1.45
LRRC28-205ENST00000558248 SEMA6CQ9H3T2 930 aa5.97□□□□□ -1.45
LRRC28-205ENST00000558248 ACSS3Q9H6R3 686 aa5.97□□□□□ -1.45
LRRC28-205ENST00000558248 IGSF5Q9NSI5 407 aa5.97□□□□□ -1.45
LRRC28-205ENST00000558248 LEMD3Q9Y2U8 911 aa5.97□□□□□ -1.45
LRRC28-205ENST00000558248 ABCA10Q8WWZ4 1543 aa5.97□□□□□ -1.45
LRRC28-205ENST00000558248 TOP2BQ02880 1626 aa5.96□□□□□ -1.45
LRRC28-205ENST00000558248 ENC1O14682 589 aa5.96□□□□□ -1.46
LRRC28-205ENST00000558248 TMPRSS2O15393 492 aa5.96□□□□□ -1.46
LRRC28-205ENST00000558248 HYAL3O43820 417 aaPredicted RBP5.96□□□□□ -1.46
LRRC28-205ENST00000558248 ZNF862O60290 1169 aa5.96□□□□□ -1.46
LRRC28-205ENST00000558248 XPCQ01831 940 aaPredicted RBP5.96□□□□□ -1.46
LRRC28-205ENST00000558248 SCARA3Q6AZY7 606 aa5.96□□□□□ -1.46
LRRC28-205ENST00000558248 GSX1Q9H4S2 264 aaPredicted RBP5.96□□□□□ -1.46
LRRC28-205ENST00000558248 PICK1Q9NRD5 415 aa5.96□□□□□ -1.46
LRRC28-205ENST00000558248 CRIM1Q9NZV1 1036 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms