RNA–Protein interactions for RNA: ENST00000557678.1

GPHN-216, Transcript of gephyrin, humanhuman

TSL 3

Gene GPHN, Length 592 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-216ENST00000557678 PCOLCE2Q9UKZ9 415 aa5.5□□□□□ -1.53
GPHN-216ENST00000557678 SYNGAP1Q96PV0 1343 aa5.49□□□□□ -1.53
GPHN-216ENST00000557678 ARNTP27540 789 aa5.49□□□□□ -1.53
GPHN-216ENST00000557678 BNIP3Q12983 259 aa5.49□□□□□ -1.53
GPHN-216ENST00000557678 KIF4BQ2VIQ3 1234 aa5.49□□□□□ -1.53
GPHN-216ENST00000557678 TPTE2Q6XPS3 522 aa5.49□□□□□ -1.53
GPHN-216ENST00000557678 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.49□□□□□ -1.53
GPHN-216ENST00000557678 STK11IPQ8N1F8 1099 aa5.49□□□□□ -1.53
GPHN-216ENST00000557678 PLD6Q8N2A8 252 aaKnown RBP5.49□□□□□ -1.53
GPHN-216ENST00000557678 NETO1Q8TDF5 533 aa5.49□□□□□ -1.53
GPHN-216ENST00000557678 BCL7CQ8WUZ0 217 aaPredicted RBP5.49□□□□□ -1.53
GPHN-216ENST00000557678 ASIC4Q96FT7 647 aa5.49□□□□□ -1.53
GPHN-216ENST00000557678 EMILIN2Q9BXX0 1053 aa5.49□□□□□ -1.53
GPHN-216ENST00000557678 CSADQ9Y600 493 aa5.49□□□□□ -1.53
GPHN-216ENST00000557678 BRD1O95696 1058 aa5.48□□□□□ -1.53
GPHN-216ENST00000557678 NME2P22392 152 aa5.48□□□□□ -1.53
GPHN-216ENST00000557678 STK35Q8TDR2 534 aa5.48□□□□□ -1.53
GPHN-216ENST00000557678 KRTAP4-11Q9BYQ6 195 aa5.48□□□□□ -1.53
GPHN-216ENST00000557678 SAMM50Q9Y512 469 aa5.48□□□□□ -1.53
GPHN-216ENST00000557678 FBXO24O75426 580 aa5.47□□□□□ -1.53
GPHN-216ENST00000557678 LEFTY1O75610 366 aa5.47□□□□□ -1.53
GPHN-216ENST00000557678 ITIH2P19823 946 aa5.47□□□□□ -1.53
GPHN-216ENST00000557678 GSTT1P30711 240 aa5.47□□□□□ -1.53
GPHN-216ENST00000557678 ENOX2Q16206 610 aaKnown RBP5.47□□□□□ -1.53
GPHN-216ENST00000557678 NFXL1Q6ZNB6 911 aa5.47□□□□□ -1.53
GPHN-216ENST00000557678 SPRED2Q7Z698 418 aa5.47□□□□□ -1.53
GPHN-216ENST00000557678 PDZD3Q86UT5 571 aa5.47□□□□□ -1.53
GPHN-216ENST00000557678 ZSCAN29Q8IWY8 852 aaPredicted RBP5.47□□□□□ -1.53
GPHN-216ENST00000557678 TOP6BLQ8N6T0 577 aa5.47□□□□□ -1.53
GPHN-216ENST00000557678 GPBAR1Q8TDU6 330 aa5.47□□□□□ -1.53
GPHN-216ENST00000557678 ISL2Q96A47 359 aa5.47□□□□□ -1.53
GPHN-216ENST00000557678 MISP3Q96FF7 219 aa5.47□□□□□ -1.53
GPHN-216ENST00000557678 DCDC2CA8MYV0 355 aa5.46□□□□□ -1.54
GPHN-216ENST00000557678 TREHO43280 583 aa5.46□□□□□ -1.54
GPHN-216ENST00000557678 JUNBP17275 347 aaPredicted RBP5.46□□□□□ -1.54
GPHN-216ENST00000557678 ATP2B2Q01814 1243 aa5.46□□□□□ -1.54
GPHN-216ENST00000557678 PPM1JQ5JR12 505 aa5.46□□□□□ -1.54
GPHN-216ENST00000557678 CBLL1Q75N03 491 aa5.46□□□□□ -1.54
GPHN-216ENST00000557678 DUSP23Q9BVJ7 150 aa5.46□□□□□ -1.54
GPHN-216ENST00000557678 GNEQ9Y223 722 aaKnown RBP5.46□□□□□ -1.54
GPHN-216ENST00000557678 PCDHGC5Q9Y5F6 944 aa5.46□□□□□ -1.54
GPHN-216ENST00000557678 BIN1O00499 593 aa5.45□□□□□ -1.54
GPHN-216ENST00000557678 NEFMP07197 916 aa5.45□□□□□ -1.54
GPHN-216ENST00000557678 CD96P40200 585 aa5.45□□□□□ -1.54
GPHN-216ENST00000557678 JAG1P78504 1218 aa5.45□□□□□ -1.54
GPHN-216ENST00000557678 DSC3Q14574 896 aa5.45□□□□□ -1.54
GPHN-216ENST00000557678 COL19A1Q14993 1142 aa5.45□□□□□ -1.54
GPHN-216ENST00000557678 IFI16Q16666 785 aaKnown RBP5.45□□□□□ -1.54
GPHN-216ENST00000557678 AOC3Q16853 763 aa5.45□□□□□ -1.54
GPHN-216ENST00000557678 ZNF792Q3KQV3 632 aa5.45□□□□□ -1.54
GPHN-216ENST00000557678 CDC37L1Q7L3B6 337 aa5.45□□□□□ -1.54
GPHN-216ENST00000557678 C12orf40Q86WS4 652 aa5.45□□□□□ -1.54
GPHN-216ENST00000557678 RNF214Q8ND24 703 aa5.45□□□□□ -1.54
GPHN-216ENST00000557678 PI4K2BQ8TCG2 481 aa5.45□□□□□ -1.54
GPHN-216ENST00000557678 HRASLS5Q96KN8 279 aa5.45□□□□□ -1.54
GPHN-216ENST00000557678 CEP44Q9C0F1 390 aa5.45□□□□□ -1.54
GPHN-216ENST00000557678 CD8BP10966 210 aa5.44□□□□□ -1.54
GPHN-216ENST00000557678 ERVK-24P63145 666 aa5.44□□□□□ -1.54
GPHN-216ENST00000557678 LRRC14Q15048 493 aa5.44□□□□□ -1.54
GPHN-216ENST00000557678 ZC3H12AQ5D1E8 599 aaKnown RBP5.44□□□□□ -1.54
GPHN-216ENST00000557678 OGFOD2Q6N063 350 aa5.44□□□□□ -1.54
GPHN-216ENST00000557678 MPRIPQ6WCQ1 1025 aa5.44□□□□□ -1.54
GPHN-216ENST00000557678 GRIN3AQ8TCU5 1115 aa5.44□□□□□ -1.54
GPHN-216ENST00000557678 ELMO3Q96BJ8 720 aa5.44□□□□□ -1.54
GPHN-216ENST00000557678 NECAB3Q96P71 396 aaPredicted RBP5.44□□□□□ -1.54
GPHN-216ENST00000557678 SETDB2Q96T68 719 aa5.44□□□□□ -1.54
GPHN-216ENST00000557678 RC3H2Q9HBD1 1191 aaKnown RBP5.44□□□□□ -1.54
GPHN-216ENST00000557678 PCDHA4Q9UN74 947 aa5.44□□□□□ -1.54
GPHN-216ENST00000557678 IVNS1ABPQ9Y6Y0 642 aa5.44□□□□□ -1.54
GPHN-216ENST00000557678 TMEM265A0A087WTH1 108 aa5.43□□□□□ -1.54
GPHN-216ENST00000557678 CEACAM5P06731 702 aa5.43□□□□□ -1.54
GPHN-216ENST00000557678 PRKCQQ04759 706 aa5.43□□□□□ -1.54
GPHN-216ENST00000557678 ALG1LQ6GMV1 187 aa5.43□□□□□ -1.54
GPHN-216ENST00000557678 LLGL2Q6P1M3 1020 aa5.43□□□□□ -1.54
GPHN-216ENST00000557678 C3orf58Q8NDZ4 430 aa5.43□□□□□ -1.54
GPHN-216ENST00000557678 FBF1Q8TES7 1133 aa5.43□□□□□ -1.54
GPHN-216ENST00000557678 KRTAP4-5Q9BYR2 181 aa5.43□□□□□ -1.54
GPHN-216ENST00000557678 SRCIN1Q9C0H9 1055 aa5.43□□□□□ -1.54
GPHN-216ENST00000557678 VAV3Q9UKW4 847 aa5.43□□□□□ -1.54
GPHN-216ENST00000557678 WWC3Q9ULE0 1092 aa5.43□□□□□ -1.54
GPHN-216ENST00000557678 SPG7Q9UQ90 795 aa5.43□□□□□ -1.54
GPHN-216ENST00000557678 ENC1O14682 589 aa5.42□□□□□ -1.54
GPHN-216ENST00000557678 PAGE1O75459 146 aa5.42□□□□□ -1.54
GPHN-216ENST00000557678 ITGB5P18084 799 aa5.42□□□□□ -1.54
GPHN-216ENST00000557678 ZNF252P-AS1Q0IIN9 211 aa5.42□□□□□ -1.54
GPHN-216ENST00000557678 ANGEL2Q5VTE6 544 aaKnown RBP5.42□□□□□ -1.54
GPHN-216ENST00000557678 OSBPL7Q9BZF2 842 aa5.42□□□□□ -1.54
GPHN-216ENST00000557678 GTF2IRD1Q9UHL9 959 aa5.42□□□□□ -1.54
GPHN-216ENST00000557678 TIMELESSQ9UNS1 1208 aa5.42□□□□□ -1.54
GPHN-216ENST00000557678 U3KQE9 123 aa5.42□□□□□ -1.54
GPHN-216ENST00000557678 PRAMEF27A3QJZ7 478 aa5.41□□□□□ -1.54
GPHN-216ENST00000557678 GNAT3A8MTJ3 354 aa5.41□□□□□ -1.54
GPHN-216ENST00000557678 TRIM37O94972 964 aa5.41□□□□□ -1.54
GPHN-216ENST00000557678 LMNB1P20700 586 aa5.41□□□□□ -1.54
GPHN-216ENST00000557678 BMP6P22004 513 aa5.41□□□□□ -1.54
GPHN-216ENST00000557678 FUT4P22083 530 aa5.41□□□□□ -1.54
GPHN-216ENST00000557678 OXCT1P55809 520 aa5.41□□□□□ -1.54
GPHN-216ENST00000557678 IKZF1Q13422 519 aa5.41□□□□□ -1.54
GPHN-216ENST00000557678 MKNK2Q9HBH9 465 aa5.41□□□□□ -1.54
GPHN-216ENST00000557678 PRDM10Q9NQV6 1147 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms