RNA–Protein interactions for RNA: ENST00000556374.5

ATXN3-241, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,083 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-241ENST00000556374 AAMPQ13685 434 aa6.1□□□□□ -1.43
ATXN3-241ENST00000556374 NUTM2GQ5VZR2 741 aa6.1□□□□□ -1.43
ATXN3-241ENST00000556374 UBASH3BQ8TF42 649 aa6.1□□□□□ -1.43
ATXN3-241ENST00000556374 MYOM3Q5VTT5 1437 aa6.09□□□□□ -1.43
ATXN3-241ENST00000556374 KIDINS220Q9ULH0 1771 aa6.09□□□□□ -1.43
ATXN3-241ENST00000556374 HMX2A2RU54 273 aa6.09□□□□□ -1.43
ATXN3-241ENST00000556374 PAX4O43316 350 aa6.09□□□□□ -1.43
ATXN3-241ENST00000556374 ANP32CO43423 234 aa6.09□□□□□ -1.43
ATXN3-241ENST00000556374 TGFB1P01137 390 aa6.09□□□□□ -1.43
ATXN3-241ENST00000556374 ESRRAP11474 423 aaPredicted RBP6.09□□□□□ -1.43
ATXN3-241ENST00000556374 CDC25BP30305 580 aa6.09□□□□□ -1.43
ATXN3-241ENST00000556374 SSTR4P31391 388 aa6.09□□□□□ -1.43
ATXN3-241ENST00000556374 PREPP48147 710 aa6.09□□□□□ -1.43
ATXN3-241ENST00000556374 PTPN12Q05209 780 aaKnown RBP6.09□□□□□ -1.43
ATXN3-241ENST00000556374 PEAR1Q5VY43 1037 aaPredicted RBP6.09□□□□□ -1.43
ATXN3-241ENST00000556374 PHLDB3Q6NSJ2 640 aa6.09□□□□□ -1.43
ATXN3-241ENST00000556374 DDX54Q8TDD1 881 aaKnown RBP6.09□□□□□ -1.43
ATXN3-241ENST00000556374 METTL22Q9BUU2 404 aaPredicted RBP6.09□□□□□ -1.43
ATXN3-241ENST00000556374 YIPF2Q9BWQ6 316 aa6.09□□□□□ -1.43
ATXN3-241ENST00000556374 HFM1A2PYH4 1435 aa6.08□□□□□ -1.44
ATXN3-241ENST00000556374 PLCH2O75038 1416 aa6.08□□□□□ -1.44
ATXN3-241ENST00000556374 LRRIQ1Q96JM4 1722 aa6.08□□□□□ -1.44
ATXN3-241ENST00000556374 IQGAP1P46940 1657 aa6.08□□□□□ -1.44
ATXN3-241ENST00000556374 GAS2O43903 313 aaKnown RBP6.08□□□□□ -1.44
ATXN3-241ENST00000556374 ACPPP15309 386 aa6.08□□□□□ -1.44
ATXN3-241ENST00000556374 NLRP12P59046 1061 aa6.08□□□□□ -1.44
ATXN3-241ENST00000556374 PDE3BQ13370 1112 aa6.08□□□□□ -1.44
ATXN3-241ENST00000556374 ERICH6Q7L0X2 663 aa6.08□□□□□ -1.44
ATXN3-241ENST00000556374 GALNT12Q8IXK2 581 aa6.08□□□□□ -1.44
ATXN3-241ENST00000556374 SLC7A3Q8WY07 619 aa6.08□□□□□ -1.44
ATXN3-241ENST00000556374 EZH1Q92800 747 aaPredicted RBP6.08□□□□□ -1.44
ATXN3-241ENST00000556374 XIRP1Q702N8 1843 aaKnown RBP6.08□□□□□ -1.44
ATXN3-241ENST00000556374 NCOA2Q15596 1464 aa6.08□□□□□ -1.44
ATXN3-241ENST00000556374 MLH3Q9UHC1 1453 aa6.08□□□□□ -1.44
ATXN3-241ENST00000556374 KIF14Q15058 1648 aa6.07□□□□□ -1.44
ATXN3-241ENST00000556374 LOC100289279A0A1B0GTE1 492 aa6.07□□□□□ -1.44
ATXN3-241ENST00000556374 A6NHS1 94 aa6.07□□□□□ -1.44
ATXN3-241ENST00000556374 ICMTO60725 284 aa6.07□□□□□ -1.44
ATXN3-241ENST00000556374 WNT11O96014 354 aa6.07□□□□□ -1.44
ATXN3-241ENST00000556374 CYP11A1P05108 521 aa6.07□□□□□ -1.44
ATXN3-241ENST00000556374 MAP4P27816 1152 aaKnown RBP6.07□□□□□ -1.44
ATXN3-241ENST00000556374 TXKP42681 527 aa6.07□□□□□ -1.44
ATXN3-241ENST00000556374 IRAK1P51617 712 aa6.07□□□□□ -1.44
ATXN3-241ENST00000556374 GP2P55259 537 aaKnown RBP6.07□□□□□ -1.44
ATXN3-241ENST00000556374 KIAA0319Q5VV43 1072 aa6.07□□□□□ -1.44
ATXN3-241ENST00000556374 CCNJLQ8IV13 435 aa6.07□□□□□ -1.44
ATXN3-241ENST00000556374 FMNL2Q96PY5 1086 aa6.07□□□□□ -1.44
ATXN3-241ENST00000556374 CLEC4MQ9H2X3 399 aaPredicted RBP6.07□□□□□ -1.44
ATXN3-241ENST00000556374 KCNF1Q9H3M0 494 aa6.07□□□□□ -1.44
ATXN3-241ENST00000556374 SUPT16HQ9Y5B9 1047 aaKnown RBP6.07□□□□□ -1.44
ATXN3-241ENST00000556374 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.07□□□□□ -1.44
ATXN3-241ENST00000556374 ABCC1P33527 1531 aa6.07□□□□□ -1.44
ATXN3-241ENST00000556374 LRRC7Q96NW7 1537 aa6.07□□□□□ -1.44
ATXN3-241ENST00000556374 A2ML1A8K2U0 1454 aa6.07□□□□□ -1.44
ATXN3-241ENST00000556374 DEPDC5O75140 1603 aa6.07□□□□□ -1.44
ATXN3-241ENST00000556374 ARHGAP5Q13017 1502 aa6.06□□□□□ -1.44
ATXN3-241ENST00000556374 CDK13Q14004 1512 aaKnown RBP6.06□□□□□ -1.44
ATXN3-241ENST00000556374 CDC42BPBQ9Y5S2 1711 aa6.06□□□□□ -1.44
ATXN3-241ENST00000556374 MED26O95402 600 aa6.06□□□□□ -1.44
ATXN3-241ENST00000556374 C12orf50Q8NA57 414 aaPredicted RBP6.06□□□□□ -1.44
ATXN3-241ENST00000556374 SHKBP1Q8TBC3 707 aa6.06□□□□□ -1.44
ATXN3-241ENST00000556374 HHIPQ96QV1 700 aa6.06□□□□□ -1.44
ATXN3-241ENST00000556374 NRSN2Q9GZP1 204 aa6.06□□□□□ -1.44
ATXN3-241ENST00000556374 DNAJC25Q9H1X3 360 aa6.06□□□□□ -1.44
ATXN3-241ENST00000556374 PIM2Q9P1W9 311 aa6.06□□□□□ -1.44
ATXN3-241ENST00000556374 FOXD3Q9UJU5 478 aaPredicted RBP6.06□□□□□ -1.44
ATXN3-241ENST00000556374 PREX2Q70Z35 1606 aa6.06□□□□□ -1.44
ATXN3-241ENST00000556374 A0A096LPE4 126 aa6.05□□□□□ -1.44
ATXN3-241ENST00000556374 A0A1W2PPZ6 126 aa6.05□□□□□ -1.44
ATXN3-241ENST00000556374 CCER2I3L3R5 266 aa6.05□□□□□ -1.44
ATXN3-241ENST00000556374 HNRNPUQ00839 825 aaKnown RBP eCLIP6.05□□□□□ -1.44
ATXN3-241ENST00000556374 PAOXQ6QHF9 649 aa6.05□□□□□ -1.44
ATXN3-241ENST00000556374 ATG3Q9NT62 314 aa6.05□□□□□ -1.44
ATXN3-241ENST00000556374 BRPF3Q9ULD4 1205 aa6.05□□□□□ -1.44
ATXN3-241ENST00000556374 PLXNC1O60486 1568 aa6.05□□□□□ -1.44
ATXN3-241ENST00000556374 ZC3H13Q5T200 1668 aaKnown RBP6.04□□□□□ -1.44
ATXN3-241ENST00000556374 FAM95CA0A1B0GW59 222 aa6.04□□□□□ -1.44
ATXN3-241ENST00000556374 NDUFB5O43674 189 aa6.04□□□□□ -1.44
ATXN3-241ENST00000556374 TRPA1O75762 1119 aa6.04□□□□□ -1.44
ATXN3-241ENST00000556374 PRNPP04156 253 aa6.04□□□□□ -1.44
ATXN3-241ENST00000556374 ITPKAP23677 461 aa6.04□□□□□ -1.44
ATXN3-241ENST00000556374 CYP27A1Q02318 531 aa6.04□□□□□ -1.44
ATXN3-241ENST00000556374 SOX4Q06945 474 aaPredicted RBP6.04□□□□□ -1.44
ATXN3-241ENST00000556374 MTMR3Q13615 1198 aa6.04□□□□□ -1.44
ATXN3-241ENST00000556374 RPS26P11Q5JNZ5 115 aaPredicted RBP6.04□□□□□ -1.44
ATXN3-241ENST00000556374 ASAP3Q8TDY4 903 aa6.04□□□□□ -1.44
ATXN3-241ENST00000556374 FAM129BQ96TA1 746 aa6.04□□□□□ -1.44
ATXN3-241ENST00000556374 CCDC87Q9NVE4 849 aa6.04□□□□□ -1.44
ATXN3-241ENST00000556374 ADGBQ8N7X0 1667 aa6.04□□□□□ -1.44
ATXN3-241ENST00000556374 ROBO1Q9Y6N7 1651 aa6.04□□□□□ -1.44
ATXN3-241ENST00000556374 NAIPQ13075 1403 aa6.03□□□□□ -1.44
ATXN3-241ENST00000556374 MIA2Q96PC5 1412 aa6.03□□□□□ -1.44
ATXN3-241ENST00000556374 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.03□□□□□ -1.44
ATXN3-241ENST00000556374 A0A1W2PP55 124 aa6.03□□□□□ -1.44
ATXN3-241ENST00000556374 PLEKHD1A6NEE1 506 aa6.03□□□□□ -1.44
ATXN3-241ENST00000556374 FOSL1P15407 271 aa6.03□□□□□ -1.44
ATXN3-241ENST00000556374 YBX3P16989 372 aaKnown RBP eCLIP6.03□□□□□ -1.44
ATXN3-241ENST00000556374 DDX10Q13206 875 aaKnown RBP6.03□□□□□ -1.44
ATXN3-241ENST00000556374 MAP7Q14244 749 aa6.03□□□□□ -1.44
ATXN3-241ENST00000556374 TCF12Q99081 682 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms