RNA–Protein interactions for RNA: ENST00000556170.5

NEK9-209, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 3,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-209ENST00000556170 KAT14Q9H8E8 782 aa17.02■□□□□ 0.32
NEK9-209ENST00000556170 YEATS4O95619 227 aa17.02■□□□□ 0.32
NEK9-209ENST00000556170 PDE4BQ07343 736 aa17.02■□□□□ 0.32
NEK9-209ENST00000556170 SNW1Q13573 536 aaKnown RBP17.02■□□□□ 0.32
NEK9-209ENST00000556170 SENP2Q9HC62 589 aa17.02■□□□□ 0.32
NEK9-209ENST00000556170 GSDMDP57764 484 aa17.02■□□□□ 0.31
NEK9-209ENST00000556170 PPARAQ07869 468 aa17.02■□□□□ 0.31
NEK9-209ENST00000556170 NR5A1Q13285 461 aa17.02■□□□□ 0.31
NEK9-209ENST00000556170 TRMT44Q8IYL2 757 aaKnown RBP17.02■□□□□ 0.31
NEK9-209ENST00000556170 PLCD3Q8N3E9 789 aa17.02■□□□□ 0.31
NEK9-209ENST00000556170 KCNB2Q92953 911 aa17.02■□□□□ 0.31
NEK9-209ENST00000556170 KIF23Q02241 960 aaPredicted RBP17.01■□□□□ 0.31
NEK9-209ENST00000556170 ZNF654Q8IZM8 581 aa17.01■□□□□ 0.31
NEK9-209ENST00000556170 RPGRQ92834 1020 aaKnown RBP17.01■□□□□ 0.31
NEK9-209ENST00000556170 MST1RQ04912 1400 aa17.01■□□□□ 0.31
NEK9-209ENST00000556170 CCDC194A0A1B0GVG4 234 aa17.01■□□□□ 0.31
NEK9-209ENST00000556170 VWA3AA6NCI4 1184 aa17.01■□□□□ 0.31
NEK9-209ENST00000556170 MCM7P33993 719 aa17.01■□□□□ 0.31
NEK9-209ENST00000556170 IKQ13123 557 aaPredicted RBP17.01■□□□□ 0.31
NEK9-209ENST00000556170 SMARCC2Q8TAQ2 1214 aa17.01■□□□□ 0.31
NEK9-209ENST00000556170 AK7Q96M32 723 aa17.01■□□□□ 0.31
NEK9-209ENST00000556170 RTEL1Q9NZ71 1219 aa17.01■□□□□ 0.31
NEK9-209ENST00000556170 ERFEQ4G0M1 354 aa17.01■□□□□ 0.31
NEK9-209ENST00000556170 RTCBQ9Y3I0 505 aaKnown RBP17.01■□□□□ 0.31
NEK9-209ENST00000556170 ZMYM6O95789 1325 aa17■□□□□ 0.31
NEK9-209ENST00000556170 HIBADHP31937 336 aaKnown RBP17■□□□□ 0.31
NEK9-209ENST00000556170 SAP30BPQ9UHR5 308 aaKnown RBP17■□□□□ 0.31
NEK9-209ENST00000556170 TNKSO95271 1327 aa17■□□□□ 0.31
NEK9-209ENST00000556170 TRIM28Q13263 835 aaKnown RBP17■□□□□ 0.31
NEK9-209ENST00000556170 MB21D2Q8IYB1 491 aaPredicted RBP17■□□□□ 0.31
NEK9-209ENST00000556170 TRIM34Q9BYJ4 488 aa17■□□□□ 0.31
NEK9-209ENST00000556170 CDC27P30260 824 aa17■□□□□ 0.31
NEK9-209ENST00000556170 SOGA3Q5TF21 947 aa17■□□□□ 0.31
NEK9-209ENST00000556170 MAPK8IP1Q9UQF2 711 aa17■□□□□ 0.31
NEK9-209ENST00000556170 NEDD4P46934 1319 aa16.99■□□□□ 0.31
NEK9-209ENST00000556170 NEMFO60524 1076 aa16.99■□□□□ 0.31
NEK9-209ENST00000556170 SSBP05455 408 aaKnown RBP eCLIP16.99■□□□□ 0.31
NEK9-209ENST00000556170 RPS8P62241 208 aaKnown RBP16.99■□□□□ 0.31
NEK9-209ENST00000556170 CCDC47Q96A33 483 aaKnown RBP16.99■□□□□ 0.31
NEK9-209ENST00000556170 ZSWIM4Q9H7M6 989 aa16.99■□□□□ 0.31
NEK9-209ENST00000556170 DNAI1Q9UI46 699 aa16.99■□□□□ 0.31
NEK9-209ENST00000556170 DEXIO95424 95 aa16.99■□□□□ 0.31
NEK9-209ENST00000556170 RBM5P52756 815 aaKnown RBP eCLIP16.99■□□□□ 0.31
NEK9-209ENST00000556170 FANCBQ8NB91 859 aa16.99■□□□□ 0.31
NEK9-209ENST00000556170 KIAA1524Q8TCG1 905 aa16.99■□□□□ 0.31
NEK9-209ENST00000556170 UBE2Q2LH0YL09 131 aa16.99■□□□□ 0.31
NEK9-209ENST00000556170 SH2B2O14492 632 aaPredicted RBP16.99■□□□□ 0.31
NEK9-209ENST00000556170 FDPSP14324 419 aaKnown RBP16.99■□□□□ 0.31
NEK9-209ENST00000556170 FANCCQ00597 558 aa16.99■□□□□ 0.31
NEK9-209ENST00000556170 MYL5Q02045 173 aa16.98■□□□□ 0.31
NEK9-209ENST00000556170 TDRD7Q8NHU6 1098 aaKnown RBP16.98■□□□□ 0.31
NEK9-209ENST00000556170 SRP68Q9UHB9 627 aaKnown RBP16.98■□□□□ 0.31
NEK9-209ENST00000556170 CCNL1Q9UK58 526 aaPredicted RBP16.98■□□□□ 0.31
NEK9-209ENST00000556170 TSPY3P0CV98 308 aa16.98■□□□□ 0.31
NEK9-209ENST00000556170 TSPY8P0CW00 308 aa16.98■□□□□ 0.31
NEK9-209ENST00000556170 HEATR3Q7Z4Q2 680 aa16.98■□□□□ 0.31
NEK9-209ENST00000556170 ZSCAN29Q8IWY8 852 aaPredicted RBP16.98■□□□□ 0.31
NEK9-209ENST00000556170 MYRIPQ8NFW9 859 aa16.98■□□□□ 0.31
NEK9-209ENST00000556170 CGNQ9P2M7 1197 aaKnown RBP16.98■□□□□ 0.31
NEK9-209ENST00000556170 KIF28PB7ZC32 967 aa16.98■□□□□ 0.31
NEK9-209ENST00000556170 AP5Z1O43299 807 aa16.98■□□□□ 0.31
NEK9-209ENST00000556170 IGSF3O75054 1194 aa16.98■□□□□ 0.31
NEK9-209ENST00000556170 IPO7O95373 1038 aaKnown RBP16.98■□□□□ 0.31
NEK9-209ENST00000556170 SYT10Q6XYQ8 523 aa16.98■□□□□ 0.31
NEK9-209ENST00000556170 NOSTRINQ8IVI9 506 aa16.98■□□□□ 0.31
NEK9-209ENST00000556170 COL15A1P39059 1388 aa16.98■□□□□ 0.31
NEK9-209ENST00000556170 MPHOSPH10O00566 681 aaKnown RBP16.97■□□□□ 0.31
NEK9-209ENST00000556170 CSF1RP07333 972 aa16.97■□□□□ 0.31
NEK9-209ENST00000556170 ANTXR2P58335 489 aa16.97■□□□□ 0.31
NEK9-209ENST00000556170 RILPL1Q5EBL4 403 aa16.97■□□□□ 0.31
NEK9-209ENST00000556170 PIK3AP1Q6ZUJ8 805 aa16.97■□□□□ 0.31
NEK9-209ENST00000556170 LRP10Q7Z4F1 713 aa16.97■□□□□ 0.31
NEK9-209ENST00000556170 GRAMD1CQ8IYS0 662 aa16.97■□□□□ 0.31
NEK9-209ENST00000556170 SERTAD1Q9UHV2 236 aa16.97■□□□□ 0.31
NEK9-209ENST00000556170 GOLGA8FQ08AF8 430 aa16.97■□□□□ 0.31
NEK9-209ENST00000556170 GOLGA8DPQ0D2H9 430 aa16.97■□□□□ 0.31
NEK9-209ENST00000556170 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.97■□□□□ 0.31
NEK9-209ENST00000556170 KIF13AQ9H1H9 1805 aa16.97■□□□□ 0.31
NEK9-209ENST00000556170 PALLDQ8WX93 1383 aa16.97■□□□□ 0.31
NEK9-209ENST00000556170 CMA1P23946 247 aa16.96■□□□□ 0.31
NEK9-209ENST00000556170 PICALMQ13492 652 aa16.96■□□□□ 0.31
NEK9-209ENST00000556170 SLC39A14Q15043 492 aa16.96■□□□□ 0.31
NEK9-209ENST00000556170 CDK5RAP3Q96JB5 506 aa16.96■□□□□ 0.31
NEK9-209ENST00000556170 ALDH8A1Q9H2A2 487 aaPredicted RBP16.96■□□□□ 0.31
NEK9-209ENST00000556170 ZHX3Q9H4I2 956 aa16.96■□□□□ 0.31
NEK9-209ENST00000556170 PCDHA5Q9Y5H7 936 aa16.96■□□□□ 0.31
NEK9-209ENST00000556170 ERVV-1B6SEH8 477 aa16.96■□□□□ 0.31
NEK9-209ENST00000556170 KRT2P35908 639 aa16.96■□□□□ 0.31
NEK9-209ENST00000556170 NLRP12P59046 1061 aa16.96■□□□□ 0.31
NEK9-209ENST00000556170 UBXN4Q92575 508 aa16.96■□□□□ 0.31
NEK9-209ENST00000556170 SETD1AO15047 1707 aaKnown RBP16.96■□□□□ 0.31
NEK9-209ENST00000556170 COBLO75128 1261 aa16.96■□□□□ 0.31
NEK9-209ENST00000556170 KIF5BP33176 963 aa16.96■□□□□ 0.31
NEK9-209ENST00000556170 UBA7P41226 1012 aa16.96■□□□□ 0.31
NEK9-209ENST00000556170 BAG3O95817 575 aa16.96■□□□□ 0.3
NEK9-209ENST00000556170 GNG11P61952 73 aa16.96■□□□□ 0.3
NEK9-209ENST00000556170 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.96■□□□□ 0.3
NEK9-209ENST00000556170 RIMBP2O15034 1052 aa16.95■□□□□ 0.3
NEK9-209ENST00000556170 CCDC144BQ3MJ40 725 aa16.95■□□□□ 0.3
NEK9-209ENST00000556170 RRAGBQ5VZM2 374 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms