RNA–Protein interactions for RNA: ENST00000556063.1

TDP1-214, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 1,076 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-214ENST00000556063 KIAA1211Q6ZU35 1233 aa9.15□□□□□ -0.94
TDP1-214ENST00000556063 USP48Q86UV5 1035 aa9.15□□□□□ -0.94
TDP1-214ENST00000556063 ZSCAN29Q8IWY8 852 aaPredicted RBP9.15□□□□□ -0.94
TDP1-214ENST00000556063 LCORLQ8N3X6 602 aa9.15□□□□□ -0.94
TDP1-214ENST00000556063 TGFBRAP1Q8WUH2 860 aa9.15□□□□□ -0.94
TDP1-214ENST00000556063 FAM151AQ8WW52 585 aa9.15□□□□□ -0.94
TDP1-214ENST00000556063 STRBPQ96SI9 672 aaKnown RBP9.15□□□□□ -0.94
TDP1-214ENST00000556063 PUS7LQ9H0K6 701 aaKnown RBP9.15□□□□□ -0.94
TDP1-214ENST00000556063 DEFB129Q9H1M3 183 aa9.15□□□□□ -0.94
TDP1-214ENST00000556063 DHX36Q9H2U1 1008 aaKnown RBP9.15□□□□□ -0.94
TDP1-214ENST00000556063 ATP8A2Q9NTI2 1148 aa9.15□□□□□ -0.94
TDP1-214ENST00000556063 SLC4A4Q9Y6R1 1079 aa9.15□□□□□ -0.94
TDP1-214ENST00000556063 ADAMTSL1Q8N6G6 1762 aa9.14□□□□□ -0.95
TDP1-214ENST00000556063 CCDC171Q6TFL3 1326 aa9.14□□□□□ -0.95
TDP1-214ENST00000556063 A0A0D9SFI3 127 aa9.14□□□□□ -0.95
TDP1-214ENST00000556063 M0R2C6 588 aa9.14□□□□□ -0.95
TDP1-214ENST00000556063 HLA-DOAP06340 250 aa9.14□□□□□ -0.95
TDP1-214ENST00000556063 POTEIP0CG38 1075 aa9.14□□□□□ -0.95
TDP1-214ENST00000556063 POTEJP0CG39 1038 aa9.14□□□□□ -0.95
TDP1-214ENST00000556063 CACNB3P54284 484 aa9.14□□□□□ -0.95
TDP1-214ENST00000556063 TCP10Q12799 353 aa9.14□□□□□ -0.95
TDP1-214ENST00000556063 SLFNL1Q499Z3 407 aa9.14□□□□□ -0.95
TDP1-214ENST00000556063 GIMAP6Q6P9H5 292 aa9.14□□□□□ -0.95
TDP1-214ENST00000556063 TTC6Q86TZ1 520 aa9.14□□□□□ -0.95
TDP1-214ENST00000556063 MAPKAPK5Q8IW41 473 aa9.14□□□□□ -0.95
TDP1-214ENST00000556063 FAM227BQ96M60 508 aa9.14□□□□□ -0.95
TDP1-214ENST00000556063 GLIS2Q9BZE0 524 aaPredicted RBP9.14□□□□□ -0.95
TDP1-214ENST00000556063 FLT1P17948 1338 aa9.13□□□□□ -0.95
TDP1-214ENST00000556063 PATL2C9JE40 543 aaKnown RBP9.13□□□□□ -0.95
TDP1-214ENST00000556063 PPP1R12BO60237 982 aaPredicted RBP9.13□□□□□ -0.95
TDP1-214ENST00000556063 CHGBP05060 677 aa9.13□□□□□ -0.95
TDP1-214ENST00000556063 POLR3DP05423 398 aaPredicted RBP9.13□□□□□ -0.95
TDP1-214ENST00000556063 TDO2P48775 406 aa9.13□□□□□ -0.95
TDP1-214ENST00000556063 NFIAQ12857 509 aa9.13□□□□□ -0.95
TDP1-214ENST00000556063 DCAF15Q66K64 600 aa9.13□□□□□ -0.95
TDP1-214ENST00000556063 SEC62Q99442 399 aaKnown RBP9.13□□□□□ -0.95
TDP1-214ENST00000556063 TRIM34Q9BYJ4 488 aa9.13□□□□□ -0.95
TDP1-214ENST00000556063 OSBPL5Q9H0X9 879 aaPredicted RBP9.13□□□□□ -0.95
TDP1-214ENST00000556063 MCM9Q9NXL9 1143 aa9.13□□□□□ -0.95
TDP1-214ENST00000556063 FAM198AQ9UFP1 575 aa9.13□□□□□ -0.95
TDP1-214ENST00000556063 TAOK2Q9UL54 1235 aa9.13□□□□□ -0.95
TDP1-214ENST00000556063 MYH1P12882 1939 aa9.12□□□□□ -0.95
TDP1-214ENST00000556063 ADM5C9JUS6 153 aa9.12□□□□□ -0.95
TDP1-214ENST00000556063 SGSM2O43147 1006 aa9.12□□□□□ -0.95
TDP1-214ENST00000556063 PRKAB2O43741 272 aa9.12□□□□□ -0.95
TDP1-214ENST00000556063 SLC3A2P08195 630 aaKnown RBP9.12□□□□□ -0.95
TDP1-214ENST00000556063 FOXP4Q8IVH2 680 aaPredicted RBP9.12□□□□□ -0.95
TDP1-214ENST00000556063 CRACR2BQ8N4Y2 399 aaPredicted RBP9.12□□□□□ -0.95
TDP1-214ENST00000556063 SDR42E1Q8WUS8 393 aa9.12□□□□□ -0.95
TDP1-214ENST00000556063 CDCA5Q96FF9 252 aa9.12□□□□□ -0.95
TDP1-214ENST00000556063 CSRNP1Q96S65 589 aa9.12□□□□□ -0.95
TDP1-214ENST00000556063 ESYT1Q9BSJ8 1104 aa9.12□□□□□ -0.95
TDP1-214ENST00000556063 TMEM39BQ9GZU3 492 aa9.12□□□□□ -0.95
TDP1-214ENST00000556063 NAPBQ9H115 298 aa9.12□□□□□ -0.95
TDP1-214ENST00000556063 DCP1AQ9NPI6 582 aaPredicted RBP9.12□□□□□ -0.95
TDP1-214ENST00000556063 DDX4Q9NQI0 724 aaKnown RBP9.12□□□□□ -0.95
TDP1-214ENST00000556063 PI4KBQ9UBF8 816 aa9.12□□□□□ -0.95
TDP1-214ENST00000556063 ARPP21Q9UBL0 812 aaPredicted RBP9.12□□□□□ -0.95
TDP1-214ENST00000556063 CTNNA3Q9UI47 895 aa9.12□□□□□ -0.95
TDP1-214ENST00000556063 COL2A1P02458 1487 aaPredicted RBP9.12□□□□□ -0.95
TDP1-214ENST00000556063 CNTNAP1P78357 1384 aa9.12□□□□□ -0.95
TDP1-214ENST00000556063 ATRNL1Q5VV63 1379 aa9.12□□□□□ -0.95
TDP1-214ENST00000556063 CDK5RAP2Q96SN8 1893 aa9.11□□□□□ -0.95
TDP1-214ENST00000556063 FOCADQ5VW36 1801 aa9.11□□□□□ -0.95
TDP1-214ENST00000556063 GSG1L2A8MUP6 293 aa9.11□□□□□ -0.95
TDP1-214ENST00000556063 REC8O95072 547 aa9.11□□□□□ -0.95
TDP1-214ENST00000556063 ITGBL1O95965 494 aaPredicted RBP9.11□□□□□ -0.95
TDP1-214ENST00000556063 FKBP1BP68106 108 aa9.11□□□□□ -0.95
TDP1-214ENST00000556063 TTLL12Q14166 644 aaPredicted RBP9.11□□□□□ -0.95
TDP1-214ENST00000556063 ALX1Q15699 326 aa9.11□□□□□ -0.95
TDP1-214ENST00000556063 NBPF12Q5TAG4 269 aaPredicted RBP9.11□□□□□ -0.95
TDP1-214ENST00000556063 CHRDL2Q6WN34 429 aa9.11□□□□□ -0.95
TDP1-214ENST00000556063 CCDC129Q6ZRS4 1044 aa9.11□□□□□ -0.95
TDP1-214ENST00000556063 ARMC9Q7Z3E5 817 aa9.11□□□□□ -0.95
TDP1-214ENST00000556063 IFNL3Q8IZI9 196 aa9.11□□□□□ -0.95
TDP1-214ENST00000556063 C2orf69Q8N8R5 385 aa9.11□□□□□ -0.95
TDP1-214ENST00000556063 DSCC1Q9BVC3 393 aa9.11□□□□□ -0.95
TDP1-214ENST00000556063 ZNF408Q9H9D4 720 aa9.11□□□□□ -0.95
TDP1-214ENST00000556063 ZNF287Q9HBT7 754 aa9.11□□□□□ -0.95
TDP1-214ENST00000556063 SAP30BPQ9UHR5 308 aaKnown RBP9.11□□□□□ -0.95
TDP1-214ENST00000556063 HERC5Q9UII4 1024 aaKnown RBP9.11□□□□□ -0.95
TDP1-214ENST00000556063 PALD1Q9ULE6 856 aa9.11□□□□□ -0.95
TDP1-214ENST00000556063 TRPM7Q96QT4 1865 aa9.11□□□□□ -0.95
TDP1-214ENST00000556063 ZMYM6O95789 1325 aa9.1□□□□□ -0.95
TDP1-214ENST00000556063 BAZ2AQ9UIF9 1905 aaKnown RBP9.1□□□□□ -0.95
TDP1-214ENST00000556063 USP17L12C9JPN9 530 aa9.1□□□□□ -0.95
TDP1-214ENST00000556063 USP17L21D6R901 530 aa9.1□□□□□ -0.95
TDP1-214ENST00000556063 TRAF5O00463 557 aa9.1□□□□□ -0.95
TDP1-214ENST00000556063 TBC1D12O60347 775 aa9.1□□□□□ -0.95
TDP1-214ENST00000556063 CELF2O95319 508 aaKnown RBP9.1□□□□□ -0.95
TDP1-214ENST00000556063 HSPD1P10809 573 aaKnown RBP9.1□□□□□ -0.95
TDP1-214ENST00000556063 IREB2P48200 963 aaKnown RBP9.1□□□□□ -0.95
TDP1-214ENST00000556063 SBK1Q52WX2 424 aa9.1□□□□□ -0.95
TDP1-214ENST00000556063 PRAMEF18Q5VWM3 479 aa9.1□□□□□ -0.95
TDP1-214ENST00000556063 ZNF589Q86UQ0 364 aaPredicted RBP9.1□□□□□ -0.95
TDP1-214ENST00000556063 ZFPM1Q8IX07 1006 aa9.1□□□□□ -0.95
TDP1-214ENST00000556063 TEPSINQ96N21 525 aa9.1□□□□□ -0.95
TDP1-214ENST00000556063 ZNF341Q9BYN7 854 aa9.1□□□□□ -0.95
TDP1-214ENST00000556063 EHD4Q9H223 541 aa9.1□□□□□ -0.95
TDP1-214ENST00000556063 GBA2Q9HCG7 927 aaPredicted RBP9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms