RNA–Protein interactions for RNA: ENST00000555905.5

TMEM260-208, Transcript of transmembrane protein 260, humanhuman

TSL 5

Gene TMEM260, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-208ENST00000555905 CREB3L3Q68CJ9 461 aa13.14□□□□□ -0.31
TMEM260-208ENST00000555905 AMOTL1Q8IY63 956 aa13.14□□□□□ -0.31
TMEM260-208ENST00000555905 EPB41L4AQ9HCS5 686 aaPredicted RBP13.14□□□□□ -0.31
TMEM260-208ENST00000555905 TSHZ2Q9NRE2 1034 aa13.14□□□□□ -0.31
TMEM260-208ENST00000555905 LAMA4Q16363 1823 aa13.13□□□□□ -0.31
TMEM260-208ENST00000555905 BAZ2AQ9UIF9 1905 aaKnown RBP13.13□□□□□ -0.31
TMEM260-208ENST00000555905 ZNF213O14771 459 aa13.13□□□□□ -0.31
TMEM260-208ENST00000555905 SLC27A2O14975 620 aa13.13□□□□□ -0.31
TMEM260-208ENST00000555905 DDNO94850 711 aaPredicted RBP13.13□□□□□ -0.31
TMEM260-208ENST00000555905 PRMT6Q96LA8 375 aaPredicted RBP13.13□□□□□ -0.31
TMEM260-208ENST00000555905 DCP1AQ9NPI6 582 aaPredicted RBP13.13□□□□□ -0.31
TMEM260-208ENST00000555905 GPRC5DQ9NZD1 345 aa13.13□□□□□ -0.31
TMEM260-208ENST00000555905 PCDHAC2Q9Y5I4 1007 aa13.13□□□□□ -0.31
TMEM260-208ENST00000555905 MYH1P12882 1939 aa13.12□□□□□ -0.31
TMEM260-208ENST00000555905 WDHD1O75717 1129 aaPredicted RBP13.12□□□□□ -0.31
TMEM260-208ENST00000555905 KRT32Q14532 448 aa13.12□□□□□ -0.31
TMEM260-208ENST00000555905 RBM26Q5T8P6 1007 aaKnown RBP13.12□□□□□ -0.31
TMEM260-208ENST00000555905 MAPKAPK5Q8IW41 473 aa13.12□□□□□ -0.31
TMEM260-208ENST00000555905 KCNB2Q92953 911 aa13.12□□□□□ -0.31
TMEM260-208ENST00000555905 TDRD3Q9H7E2 651 aaKnown RBP13.12□□□□□ -0.31
TMEM260-208ENST00000555905 MCM9Q9NXL9 1143 aa13.12□□□□□ -0.31
TMEM260-208ENST00000555905 ARPP21Q9UBL0 812 aaPredicted RBP13.12□□□□□ -0.31
TMEM260-208ENST00000555905 FLT1P17948 1338 aa13.12□□□□□ -0.31
TMEM260-208ENST00000555905 SHTN1A0MZ66 631 aa13.11□□□□□ -0.31
TMEM260-208ENST00000555905 GLTPD2A6NH11 291 aa13.11□□□□□ -0.31
TMEM260-208ENST00000555905 MINDY4BA8MYZ0 360 aa13.11□□□□□ -0.31
TMEM260-208ENST00000555905 USP17L12C9JPN9 530 aa13.11□□□□□ -0.31
TMEM260-208ENST00000555905 USP17L21D6R901 530 aa13.11□□□□□ -0.31
TMEM260-208ENST00000555905 POLR3DP05423 398 aaPredicted RBP13.11□□□□□ -0.31
TMEM260-208ENST00000555905 SLC3A2P08195 630 aaKnown RBP13.11□□□□□ -0.31
TMEM260-208ENST00000555905 CYP21A2P08686 494 aa13.11□□□□□ -0.31
TMEM260-208ENST00000555905 PRKAR2AP13861 404 aaKnown RBP13.11□□□□□ -0.31
TMEM260-208ENST00000555905 HAND2P61296 217 aa13.11□□□□□ -0.31
TMEM260-208ENST00000555905 PICALMQ13492 652 aa13.11□□□□□ -0.31
TMEM260-208ENST00000555905 KIF4BQ2VIQ3 1234 aa13.11□□□□□ -0.31
TMEM260-208ENST00000555905 ZBED3Q96IU2 234 aaPredicted RBP13.11□□□□□ -0.31
TMEM260-208ENST00000555905 IDI2Q9BXS1 227 aa13.11□□□□□ -0.31
TMEM260-208ENST00000555905 PALD1Q9ULE6 856 aa13.11□□□□□ -0.31
TMEM260-208ENST00000555905 SNX14Q9Y5W7 946 aa13.11□□□□□ -0.31
TMEM260-208ENST00000555905 LAMB1P07942 1786 aa13.11□□□□□ -0.31
TMEM260-208ENST00000555905 UTRNP46939 3433 aa13.11□□□□□ -0.31
TMEM260-208ENST00000555905 CLRN2A0PK11 232 aa13.1□□□□□ -0.31
TMEM260-208ENST00000555905 WNT10BO00744 389 aa13.1□□□□□ -0.31
TMEM260-208ENST00000555905 PSMA5P28066 241 aa13.1□□□□□ -0.31
TMEM260-208ENST00000555905 PPARAQ07869 468 aa13.1□□□□□ -0.31
TMEM260-208ENST00000555905 TSGA10IPQ3SY00 556 aa13.1□□□□□ -0.31
TMEM260-208ENST00000555905 TBC1D10BQ4KMP7 808 aaPredicted RBP13.1□□□□□ -0.31
TMEM260-208ENST00000555905 SBK1Q52WX2 424 aa13.1□□□□□ -0.31
TMEM260-208ENST00000555905 CTR9Q6PD62 1173 aa13.1□□□□□ -0.31
TMEM260-208ENST00000555905 SAMD7Q7Z3H4 446 aa13.1□□□□□ -0.31
TMEM260-208ENST00000555905 RASEFQ8IZ41 740 aa13.1□□□□□ -0.31
TMEM260-208ENST00000555905 L3MBTL3Q96JM7 780 aaPredicted RBP13.1□□□□□ -0.31
TMEM260-208ENST00000555905 ZNF70Q9UC06 446 aaPredicted RBP13.1□□□□□ -0.31
TMEM260-208ENST00000555905 MKRN1Q9UHC7 482 aaKnown RBP13.1□□□□□ -0.31
TMEM260-208ENST00000555905 SAP30BPQ9UHR5 308 aaKnown RBP13.1□□□□□ -0.31
TMEM260-208ENST00000555905 ENTPD3O75355 529 aa13.09□□□□□ -0.31
TMEM260-208ENST00000555905 EPS15P42566 896 aa13.09□□□□□ -0.31
TMEM260-208ENST00000555905 CACNB3P54284 484 aa13.09□□□□□ -0.31
TMEM260-208ENST00000555905 RABEP1Q15276 862 aa13.09□□□□□ -0.31
TMEM260-208ENST00000555905 NBPF9Q3BBW0 867 aa13.09□□□□□ -0.31
TMEM260-208ENST00000555905 DDX60LQ5H9U9 1706 aaKnown RBP13.09□□□□□ -0.31
TMEM260-208ENST00000555905 FKBP1CQ5VVH2 108 aa13.09□□□□□ -0.31
TMEM260-208ENST00000555905 IL17RAQ96F46 866 aa13.09□□□□□ -0.31
TMEM260-208ENST00000555905 JAKMIP1Q96N16 626 aaKnown RBP13.09□□□□□ -0.31
TMEM260-208ENST00000555905 OSBPL5Q9H0X9 879 aaPredicted RBP13.09□□□□□ -0.31
TMEM260-208ENST00000555905 RNF41Q9H4P4 317 aaPredicted RBP13.09□□□□□ -0.31
TMEM260-208ENST00000555905 VEZTQ9HBM0 779 aa13.09□□□□□ -0.31
TMEM260-208ENST00000555905 DDX4Q9NQI0 724 aaKnown RBP13.09□□□□□ -0.31
TMEM260-208ENST00000555905 ADARB2Q9NS39 739 aaKnown RBP13.09□□□□□ -0.31
TMEM260-208ENST00000555905 HACL1Q9UJ83 578 aa13.09□□□□□ -0.31
TMEM260-208ENST00000555905 ANAPC4Q9UJX5 808 aa13.09□□□□□ -0.31
TMEM260-208ENST00000555905 IQCA1LA6NCM1 817 aa13.08□□□□□ -0.32
TMEM260-208ENST00000555905 TCP10L2B9ZVM9 353 aa13.08□□□□□ -0.32
TMEM260-208ENST00000555905 HLA-DOAP06340 250 aa13.08□□□□□ -0.32
TMEM260-208ENST00000555905 TNNI2P48788 182 aa13.08□□□□□ -0.32
TMEM260-208ENST00000555905 CTDSPL2Q05D32 466 aa13.08□□□□□ -0.32
TMEM260-208ENST00000555905 TCP10Q12799 353 aa13.08□□□□□ -0.32
TMEM260-208ENST00000555905 NFIAQ12857 509 aa13.08□□□□□ -0.32
TMEM260-208ENST00000555905 TRDNQ13061 729 aa13.08□□□□□ -0.32
TMEM260-208ENST00000555905 TNFAIP1Q13829 316 aa13.08□□□□□ -0.32
TMEM260-208ENST00000555905 C12orf60Q5U649 245 aa13.08□□□□□ -0.32
TMEM260-208ENST00000555905 CHADLQ6NUI6 762 aa13.08□□□□□ -0.32
TMEM260-208ENST00000555905 MFSD6Q6ZSS7 791 aa13.08□□□□□ -0.32
TMEM260-208ENST00000555905 TTC6Q86TZ1 520 aa13.08□□□□□ -0.32
TMEM260-208ENST00000555905 TM6SF1Q9BZW5 370 aa13.08□□□□□ -0.32
TMEM260-208ENST00000555905 DHX36Q9H2U1 1008 aaKnown RBP13.08□□□□□ -0.32
TMEM260-208ENST00000555905 CNNM2Q9H8M5 875 aa13.08□□□□□ -0.32
TMEM260-208ENST00000555905 FAM198AQ9UFP1 575 aa13.08□□□□□ -0.32
TMEM260-208ENST00000555905 RBM19Q9Y4C8 960 aaKnown RBP13.08□□□□□ -0.32
TMEM260-208ENST00000555905 SCN4AP35499 1836 aa13.08□□□□□ -0.32
TMEM260-208ENST00000555905 CYP2D7A0A087X1C5 515 aa13.07□□□□□ -0.32
TMEM260-208ENST00000555905 E7EWF7 191 aa13.07□□□□□ -0.32
TMEM260-208ENST00000555905 EGFRP00533 1210 aa13.07□□□□□ -0.32
TMEM260-208ENST00000555905 HMGB1P09429 215 aaKnown RBP13.07□□□□□ -0.32
TMEM260-208ENST00000555905 CYP2D6P10635 497 aa13.07□□□□□ -0.32
TMEM260-208ENST00000555905 PCP11498 1178 aaKnown RBP13.07□□□□□ -0.32
TMEM260-208ENST00000555905 CASTP20810 708 aaKnown RBP13.07□□□□□ -0.32
TMEM260-208ENST00000555905 PDE4BQ07343 736 aa13.07□□□□□ -0.32
TMEM260-208ENST00000555905 SLC4A8Q2Y0W8 1093 aa13.07□□□□□ -0.32
TMEM260-208ENST00000555905 AKNAD1Q5T1N1 836 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms