RNA–Protein interactions for RNA: ENST00000555752.1

SUPT16H-203, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 888 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-203ENST00000555752 SLC5A1P13866 664 aa23.77■■□□□ 1.4
SUPT16H-203ENST00000555752 PTPRAP18433 802 aa23.77■■□□□ 1.4
SUPT16H-203ENST00000555752 RFX5P48382 616 aaPredicted RBP23.77■■□□□ 1.4
SUPT16H-203ENST00000555752 SCYL3Q8IZE3 742 aa23.77■■□□□ 1.4
SUPT16H-203ENST00000555752 PTPRFP10586 1907 aa23.76■■□□□ 1.39
SUPT16H-203ENST00000555752 EYA2O00167 538 aa23.76■■□□□ 1.39
SUPT16H-203ENST00000555752 SH3BP5LQ7L8J4 393 aa23.76■■□□□ 1.39
SUPT16H-203ENST00000555752 LPIN2Q92539 896 aa23.76■■□□□ 1.39
SUPT16H-203ENST00000555752 USP44Q9H0E7 712 aa23.76■■□□□ 1.39
SUPT16H-203ENST00000555752 TAOK2Q9UL54 1235 aa23.76■■□□□ 1.39
SUPT16H-203ENST00000555752 AFG3L2Q9Y4W6 797 aa23.76■■□□□ 1.39
SUPT16H-203ENST00000555752 TNPO2O14787 897 aaKnown RBP23.75■■□□□ 1.39
SUPT16H-203ENST00000555752 LDHBP07195 334 aaKnown RBP23.75■■□□□ 1.39
SUPT16H-203ENST00000555752 RGS3P49796 1198 aa23.75■■□□□ 1.39
SUPT16H-203ENST00000555752 FASTKD5Q7L8L6 764 aaKnown RBP23.75■■□□□ 1.39
SUPT16H-203ENST00000555752 CCDC84Q86UT8 332 aaPredicted RBP23.75■■□□□ 1.39
SUPT16H-203ENST00000555752 DIS3LQ8TF46 1054 aaKnown RBP23.75■■□□□ 1.39
SUPT16H-203ENST00000555752 PICK1Q9NRD5 415 aa23.75■■□□□ 1.39
SUPT16H-203ENST00000555752 DOCK3Q8IZD9 2030 aa23.74■■□□□ 1.39
SUPT16H-203ENST00000555752 ATG9AQ7Z3C6 839 aa23.74■■□□□ 1.39
SUPT16H-203ENST00000555752 MRPL50Q8N5N7 158 aaKnown RBP23.74■■□□□ 1.39
SUPT16H-203ENST00000555752 PXYLP1Q8TE99 480 aa23.74■■□□□ 1.39
SUPT16H-203ENST00000555752 PAK6Q9NQU5 681 aaPredicted RBP23.74■■□□□ 1.39
SUPT16H-203ENST00000555752 PHIPQ8WWQ0 1821 aa23.74■■□□□ 1.39
SUPT16H-203ENST00000555752 A0A1W2PPC1 479 aa23.73■■□□□ 1.39
SUPT16H-203ENST00000555752 PAWRQ96IZ0 340 aaKnown RBP23.73■■□□□ 1.39
SUPT16H-203ENST00000555752 TRIM75PA6NK02 468 aa23.72■■□□□ 1.39
SUPT16H-203ENST00000555752 IRF5Q13568 498 aa23.72■■□□□ 1.39
SUPT16H-203ENST00000555752 ZSCAN29Q8IWY8 852 aaPredicted RBP23.72■■□□□ 1.39
SUPT16H-203ENST00000555752 ANKRD13CQ8N6S4 541 aa23.72■■□□□ 1.39
SUPT16H-203ENST00000555752 SMCR8Q8TEV9 937 aaPredicted RBP23.72■■□□□ 1.39
SUPT16H-203ENST00000555752 CRISPLD2Q9H0B8 497 aa23.72■■□□□ 1.39
SUPT16H-203ENST00000555752 DOCK1Q14185 1865 aa23.72■■□□□ 1.39
SUPT16H-203ENST00000555752 MYH2Q9UKX2 1941 aa23.72■■□□□ 1.39
SUPT16H-203ENST00000555752 DDTLA6NHG4 134 aaPredicted RBP23.71■■□□□ 1.39
SUPT16H-203ENST00000555752 SIL1Q9H173 461 aa23.71■■□□□ 1.39
SUPT16H-203ENST00000555752 SLC45A1Q9Y2W3 748 aa23.71■■□□□ 1.39
SUPT16H-203ENST00000555752 RFX7Q2KHR2 1363 aa23.7■■□□□ 1.38
SUPT16H-203ENST00000555752 PHKA1P46020 1223 aa23.7■■□□□ 1.38
SUPT16H-203ENST00000555752 ATP2B3Q16720 1220 aa23.7■■□□□ 1.38
SUPT16H-203ENST00000555752 TREML2Q5T2D2 321 aa23.7■■□□□ 1.38
SUPT16H-203ENST00000555752 IDI2Q9BXS1 227 aa23.7■■□□□ 1.38
SUPT16H-203ENST00000555752 DDX4Q9NQI0 724 aaKnown RBP23.7■■□□□ 1.38
SUPT16H-203ENST00000555752 LRRFIP2Q9Y608 721 aaKnown RBP23.7■■□□□ 1.38
SUPT16H-203ENST00000555752 A0A0C4DFX4 3053 aa23.69■■□□□ 1.38
SUPT16H-203ENST00000555752 SALL1Q9NSC2 1324 aa23.69■■□□□ 1.38
SUPT16H-203ENST00000555752 ENTPD3O75355 529 aa23.69■■□□□ 1.38
SUPT16H-203ENST00000555752 MAP3K10Q02779 954 aa23.68■■□□□ 1.38
SUPT16H-203ENST00000555752 C7orf61Q8IZ16 206 aa23.68■■□□□ 1.38
SUPT16H-203ENST00000555752 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.68■■□□□ 1.38
SUPT16H-203ENST00000555752 ZMYND8Q9ULU4 1186 aaPredicted RBP23.68■■□□□ 1.38
SUPT16H-203ENST00000555752 AGTPBP1Q9UPW5 1226 aa23.68■■□□□ 1.38
SUPT16H-203ENST00000555752 GAKO14976 1311 aa23.67■■□□□ 1.38
SUPT16H-203ENST00000555752 PICALMQ13492 652 aa23.67■■□□□ 1.38
SUPT16H-203ENST00000555752 COA7Q96BR5 231 aa23.67■■□□□ 1.38
SUPT16H-203ENST00000555752 GDF15Q99988 308 aa23.67■■□□□ 1.38
SUPT16H-203ENST00000555752 PTPRCP08575 1304 aa23.66■■□□□ 1.38
SUPT16H-203ENST00000555752 FAM196BA6NMK8 535 aa23.66■■□□□ 1.38
SUPT16H-203ENST00000555752 CTNND1O60716 968 aaKnown RBP23.66■■□□□ 1.38
SUPT16H-203ENST00000555752 ADORA1P30542 326 aa23.66■■□□□ 1.38
SUPT16H-203ENST00000555752 TRIM32Q13049 653 aa23.66■■□□□ 1.38
SUPT16H-203ENST00000555752 NECAB2Q7Z6G3 386 aa23.66■■□□□ 1.38
SUPT16H-203ENST00000555752 GNL3LQ9NVN8 582 aaKnown RBP23.66■■□□□ 1.38
SUPT16H-203ENST00000555752 DENND2AQ9ULE3 1009 aa23.66■■□□□ 1.38
SUPT16H-203ENST00000555752 Q7L0L9 218 aa23.65■■□□□ 1.38
SUPT16H-203ENST00000555752 CEP126Q9P2H0 1117 aa23.65■■□□□ 1.38
SUPT16H-203ENST00000555752 SYN1P17600 705 aa23.64■■□□□ 1.37
SUPT16H-203ENST00000555752 SSH1Q8WYL5 1049 aa23.64■■□□□ 1.37
SUPT16H-203ENST00000555752 BTDP43251 543 aa23.63■■□□□ 1.37
SUPT16H-203ENST00000555752 MNX1P50219 401 aaPredicted RBP23.63■■□□□ 1.37
SUPT16H-203ENST00000555752 FAM110CQ1W6H9 321 aa23.63■■□□□ 1.37
SUPT16H-203ENST00000555752 CCDC102BQ68D86 513 aa23.63■■□□□ 1.37
SUPT16H-203ENST00000555752 DZIP1Q86YF9 867 aaKnown RBP23.63■■□□□ 1.37
SUPT16H-203ENST00000555752 FAM9BQ8IZU0 186 aa23.63■■□□□ 1.37
SUPT16H-203ENST00000555752 ABCF2Q9UG63 623 aa23.63■■□□□ 1.37
SUPT16H-203ENST00000555752 PA2G4Q9UQ80 394 aaKnown RBP23.63■■□□□ 1.37
SUPT16H-203ENST00000555752 DDX60LQ5H9U9 1706 aaKnown RBP23.62■■□□□ 1.37
SUPT16H-203ENST00000555752 SEMA3EO15041 775 aa23.62■■□□□ 1.37
SUPT16H-203ENST00000555752 CIAO1O76071 339 aa23.62■■□□□ 1.37
SUPT16H-203ENST00000555752 BMP8BP34820 402 aa23.62■■□□□ 1.37
SUPT16H-203ENST00000555752 RASGRF1Q13972 1273 aa23.62■■□□□ 1.37
SUPT16H-203ENST00000555752 DEFB123Q8N688 67 aa23.62■■□□□ 1.37
SUPT16H-203ENST00000555752 ZNF521Q96K83 1311 aa23.61■■□□□ 1.37
SUPT16H-203ENST00000555752 LOC285556D6RIA3 1793 aa23.61■■□□□ 1.37
SUPT16H-203ENST00000555752 HMGCRP04035 888 aa23.61■■□□□ 1.37
SUPT16H-203ENST00000555752 CAPN2P17655 700 aa23.61■■□□□ 1.37
SUPT16H-203ENST00000555752 SPP2Q13103 211 aa23.61■■□□□ 1.37
SUPT16H-203ENST00000555752 GJD2Q9UKL4 321 aa23.61■■□□□ 1.37
SUPT16H-203ENST00000555752 PLXNB2O15031 1838 aa23.61■■□□□ 1.37
SUPT16H-203ENST00000555752 ZNF384Q8TF68 577 aa23.6■■□□□ 1.37
SUPT16H-203ENST00000555752 PNMA3Q9UL41 463 aa23.6■■□□□ 1.37
SUPT16H-203ENST00000555752 PEX10O60683 326 aa23.59■■□□□ 1.37
SUPT16H-203ENST00000555752 MAGEA10P43363 369 aaPredicted RBP23.59■■□□□ 1.37
SUPT16H-203ENST00000555752 HMGCS2P54868 508 aa23.59■■□□□ 1.37
SUPT16H-203ENST00000555752 RHBDL3P58872 404 aa23.59■■□□□ 1.37
SUPT16H-203ENST00000555752 TIMM10P62072 90 aa23.59■■□□□ 1.37
SUPT16H-203ENST00000555752 RRP1BQ14684 758 aaKnown RBP23.59■■□□□ 1.37
SUPT16H-203ENST00000555752 ZGPATQ8N5A5 531 aaKnown RBP23.59■■□□□ 1.37
SUPT16H-203ENST00000555752 ANKLE1Q8NAG6 615 aa23.59■■□□□ 1.37
SUPT16H-203ENST00000555752 FAM163AQ96GL9 167 aaPredicted RBP23.59■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms