RNA–Protein interactions for RNA: ENST00000555235.1

MARK3-209, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 2

Gene MARK3, Length 2,282 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-209ENST00000555235 NCOA7Q8NI08 942 aa18.33■□□□□ 0.53
MARK3-209ENST00000555235 GJB4Q9NTQ9 266 aa18.33■□□□□ 0.53
MARK3-209ENST00000555235 WDR19Q8NEZ3 1342 aa18.33■□□□□ 0.52
MARK3-209ENST00000555235 ACTN2P35609 894 aa18.33■□□□□ 0.52
MARK3-209ENST00000555235 LMAN1P49257 510 aa18.33■□□□□ 0.52
MARK3-209ENST00000555235 TUBB4BP68371 445 aa18.33■□□□□ 0.52
MARK3-209ENST00000555235 PNOCQ13519 176 aa18.33■□□□□ 0.52
MARK3-209ENST00000555235 SPECC1LQ69YQ0 1117 aa18.33■□□□□ 0.52
MARK3-209ENST00000555235 APPBP2Q92624 585 aa18.33■□□□□ 0.52
MARK3-209ENST00000555235 INTS13Q9NVM9 706 aa18.33■□□□□ 0.52
MARK3-209ENST00000555235 FBXO3Q9UK99 471 aa18.33■□□□□ 0.52
MARK3-209ENST00000555235 AKAP2Q9Y2D5 859 aa18.33■□□□□ 0.52
MARK3-209ENST00000555235 DDX60Q8IY21 1712 aaKnown RBP18.33■□□□□ 0.52
MARK3-209ENST00000555235 IVLP07476 585 aa18.32■□□□□ 0.52
MARK3-209ENST00000555235 DHX58Q96C10 678 aa18.32■□□□□ 0.52
MARK3-209ENST00000555235 PUS7LQ9H0K6 701 aaKnown RBP18.32■□□□□ 0.52
MARK3-209ENST00000555235 SCARF1Q14162 830 aa18.32■□□□□ 0.52
MARK3-209ENST00000555235 CCDC102BQ68D86 513 aa18.32■□□□□ 0.52
MARK3-209ENST00000555235 SHC4Q6S5L8 630 aa18.32■□□□□ 0.52
MARK3-209ENST00000555235 LEKR1Q6ZMV7 388 aa18.32■□□□□ 0.52
MARK3-209ENST00000555235 TOGARAM2Q6ZUX3 1019 aa18.32■□□□□ 0.52
MARK3-209ENST00000555235 ELOA2Q8IYF1 753 aaPredicted RBP18.32■□□□□ 0.52
MARK3-209ENST00000555235 PDILTQ8N807 584 aa18.32■□□□□ 0.52
MARK3-209ENST00000555235 TC2NQ8N9U0 490 aa18.32■□□□□ 0.52
MARK3-209ENST00000555235 CCDC12Q8WUD4 166 aaPredicted RBP18.32■□□□□ 0.52
MARK3-209ENST00000555235 ISCA1Q9BUE6 129 aa18.32■□□□□ 0.52
MARK3-209ENST00000555235 HOOK1Q9UJC3 728 aaKnown RBP18.32■□□□□ 0.52
MARK3-209ENST00000555235 KCPQ6ZWJ8 1503 aa18.31■□□□□ 0.52
MARK3-209ENST00000555235 CCDC57Q2TAC2 916 aa18.31■□□□□ 0.52
MARK3-209ENST00000555235 RESP18Q5W5W9 173 aa18.31■□□□□ 0.52
MARK3-209ENST00000555235 SRLQ86TD4 932 aa18.31■□□□□ 0.52
MARK3-209ENST00000555235 RAB11FIP4Q86YS3 637 aa18.31■□□□□ 0.52
MARK3-209ENST00000555235 UBR2Q8IWV8 1755 aa18.31■□□□□ 0.52
MARK3-209ENST00000555235 EIF3JO75822 258 aaKnown RBP18.3■□□□□ 0.52
MARK3-209ENST00000555235 ZAP70P43403 619 aa18.3■□□□□ 0.52
MARK3-209ENST00000555235 CHMP4BP1P59074 171 aa18.3■□□□□ 0.52
MARK3-209ENST00000555235 SRGAP1Q7Z6B7 1085 aa18.3■□□□□ 0.52
MARK3-209ENST00000555235 RALYLQ86SE5 291 aaKnown RBP18.3■□□□□ 0.52
MARK3-209ENST00000555235 METTL16Q86W50 562 aaKnown RBP18.3■□□□□ 0.52
MARK3-209ENST00000555235 CPDO75976 1380 aa18.3■□□□□ 0.52
MARK3-209ENST00000555235 ABCC12Q96J65 1359 aa18.3■□□□□ 0.52
MARK3-209ENST00000555235 C4AP0C0L4 1744 aa18.3■□□□□ 0.52
MARK3-209ENST00000555235 C4BP0C0L5 1744 aa18.3■□□□□ 0.52
MARK3-209ENST00000555235 H3BQF6 201 aa18.3■□□□□ 0.52
MARK3-209ENST00000555235 ZNF213O14771 459 aa18.3■□□□□ 0.52
MARK3-209ENST00000555235 ERLIN1O75477 346 aa18.3■□□□□ 0.52
MARK3-209ENST00000555235 CCDC175P0C221 793 aa18.3■□□□□ 0.52
MARK3-209ENST00000555235 TUBB2AQ13885 445 aa18.3■□□□□ 0.52
MARK3-209ENST00000555235 HDXQ7Z353 690 aa18.3■□□□□ 0.52
MARK3-209ENST00000555235 CEP112Q8N8E3 955 aa18.3■□□□□ 0.52
MARK3-209ENST00000555235 CNNM3Q8NE01 707 aa18.3■□□□□ 0.52
MARK3-209ENST00000555235 TUBB2BQ9BVA1 445 aa18.3■□□□□ 0.52
MARK3-209ENST00000555235 DACH1Q9UI36 760 aa18.3■□□□□ 0.52
MARK3-209ENST00000555235 STRCP1A6NGW2 1772 aa18.3■□□□□ 0.52
MARK3-209ENST00000555235 ERVV-2B6SEH9 535 aa18.29■□□□□ 0.52
MARK3-209ENST00000555235 CUTAO60888 179 aa18.29■□□□□ 0.52
MARK3-209ENST00000555235 USP5P45974 858 aa18.29■□□□□ 0.52
MARK3-209ENST00000555235 PTPAQ15257 358 aa18.29■□□□□ 0.52
MARK3-209ENST00000555235 CTR9Q6PD62 1173 aa18.29■□□□□ 0.52
MARK3-209ENST00000555235 RSPH14Q9UHP6 348 aa18.29■□□□□ 0.52
MARK3-209ENST00000555235 GPAA1O43292 621 aa18.29■□□□□ 0.52
MARK3-209ENST00000555235 HSP90AB3PQ58FF7 597 aa18.29■□□□□ 0.52
MARK3-209ENST00000555235 VPS37DQ86XT2 251 aa18.29■□□□□ 0.52
MARK3-209ENST00000555235 C10orf67Q8IYJ2 551 aa18.29■□□□□ 0.52
MARK3-209ENST00000555235 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.29■□□□□ 0.52
MARK3-209ENST00000555235 RRP15Q9Y3B9 282 aaKnown RBP18.29■□□□□ 0.52
MARK3-209ENST00000555235 PCDHA5Q9Y5H7 936 aa18.29■□□□□ 0.52
MARK3-209ENST00000555235 MAP3K15Q6ZN16 1313 aa18.28■□□□□ 0.52
MARK3-209ENST00000555235 MAPK8IP2Q13387 824 aaPredicted RBP18.28■□□□□ 0.52
MARK3-209ENST00000555235 NBPF3Q9H094 633 aa18.28■□□□□ 0.52
MARK3-209ENST00000555235 RAB21Q9UL25 225 aa18.28■□□□□ 0.52
MARK3-209ENST00000555235 ZMYM6O95789 1325 aa18.28■□□□□ 0.52
MARK3-209ENST00000555235 CDKL5O76039 1030 aa18.28■□□□□ 0.52
MARK3-209ENST00000555235 ZNF18P17022 549 aa18.28■□□□□ 0.52
MARK3-209ENST00000555235 GYS2P54840 703 aa18.28■□□□□ 0.52
MARK3-209ENST00000555235 ADKP55263 362 aaKnown RBP18.28■□□□□ 0.52
MARK3-209ENST00000555235 TCIRG1Q13488 830 aa18.28■□□□□ 0.52
MARK3-209ENST00000555235 NOM1Q5C9Z4 860 aaKnown RBP18.28■□□□□ 0.52
MARK3-209ENST00000555235 BEND6Q5SZJ8 279 aaPredicted RBP18.28■□□□□ 0.52
MARK3-209ENST00000555235 GOLGA6L1Q8N7Z2 621 aa18.28■□□□□ 0.52
MARK3-209ENST00000555235 KCNH3Q9ULD8 1083 aa18.28■□□□□ 0.52
MARK3-209ENST00000555235 TNS3Q68CZ2 1445 aa18.27■□□□□ 0.52
MARK3-209ENST00000555235 PCDH11XQ9BZA7 1347 aa18.27■□□□□ 0.52
MARK3-209ENST00000555235 PCDH11YQ9BZA8 1340 aa18.27■□□□□ 0.52
MARK3-209ENST00000555235 PTPN21Q16825 1174 aa18.27■□□□□ 0.52
MARK3-209ENST00000555235 MSANTD4Q8NCY6 345 aa18.27■□□□□ 0.52
MARK3-209ENST00000555235 ZCRB1Q8TBF4 217 aaKnown RBP18.27■□□□□ 0.52
MARK3-209ENST00000555235 ENOX1Q8TC92 643 aaKnown RBP18.27■□□□□ 0.52
MARK3-209ENST00000555235 ALG1Q9BT22 464 aa18.27■□□□□ 0.52
MARK3-209ENST00000555235 NAA15Q9BXJ9 866 aaKnown RBP18.27■□□□□ 0.52
MARK3-209ENST00000555235 RPS6KA5O75582 802 aa18.26■□□□□ 0.51
MARK3-209ENST00000555235 ATF3P18847 181 aa18.26■□□□□ 0.51
MARK3-209ENST00000555235 LONRF3Q496Y0 759 aa18.26■□□□□ 0.51
MARK3-209ENST00000555235 PI16Q6UXB8 463 aa18.26■□□□□ 0.51
MARK3-209ENST00000555235 NUTM2AQ8IVF1 878 aaPredicted RBP18.26■□□□□ 0.51
MARK3-209ENST00000555235 MLKLQ8NB16 471 aa18.26■□□□□ 0.51
MARK3-209ENST00000555235 AIFM3Q96NN9 605 aa18.26■□□□□ 0.51
MARK3-209ENST00000555235 PANX2Q96RD6 677 aa18.26■□□□□ 0.51
MARK3-209ENST00000555235 MAP3K14Q99558 947 aa18.26■□□□□ 0.51
MARK3-209ENST00000555235 PLA2G12BQ9BX93 195 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms