RNA–Protein interactions for RNA: ENST00000554956.5

PSMC6-208, Transcript of proteasome 26S subunit, ATPase 6, human

TSL 3

Gene PSMC6, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC6-208	ENST00000554956	KCNF1	Q9H3M0	494 aa		8.61	□□□□□ -1.03
PSMC6-208	ENST00000554956	C7orf69	Q9H7B7	122 aa		8.61	□□□□□ -1.03
PSMC6-208	ENST00000554956	PPP1R9A	Q9ULJ8	1098 aa		8.61	□□□□□ -1.03
PSMC6-208	ENST00000554956	ACTL7B	Q9Y614	415 aa		8.61	□□□□□ -1.03
PSMC6-208	ENST00000554956	HMX2	A2RU54	273 aa		8.6	□□□□□ -1.03
PSMC6-208	ENST00000554956	CDPF1	Q6NVV7	123 aa		8.6	□□□□□ -1.03
PSMC6-208	ENST00000554956	BEND4	Q6ZU67	534 aa		8.6	□□□□□ -1.03
PSMC6-208	ENST00000554956	DYM	Q7RTS9	669 aa		8.6	□□□□□ -1.03
PSMC6-208	ENST00000554956	TRIM42	Q8IWZ5	723 aa		8.6	□□□□□ -1.03
PSMC6-208	ENST00000554956	ANKRD24	Q8TF21	1146 aa		8.6	□□□□□ -1.03
PSMC6-208	ENST00000554956	STOML1	Q9UBI4	398 aa		8.6	□□□□□ -1.03
PSMC6-208	ENST00000554956	FST	P19883	344 aa		8.59	□□□□□ -1.03
PSMC6-208	ENST00000554956	MAP4	P27816	1152 aa	Known RBP	8.59	□□□□□ -1.03
PSMC6-208	ENST00000554956	ZNF252P-AS1	Q0IIN9	211 aa		8.59	□□□□□ -1.03
PSMC6-208	ENST00000554956	PCNX4	Q63HM2	1172 aa		8.59	□□□□□ -1.03
PSMC6-208	ENST00000554956	FBLIM1	Q8WUP2	373 aa		8.59	□□□□□ -1.03
PSMC6-208	ENST00000554956	KRT82	Q9NSB4	513 aa		8.59	□□□□□ -1.03
PSMC6-208	ENST00000554956	VTI1B	Q9UEU0	232 aa		8.59	□□□□□ -1.03
PSMC6-208	ENST00000554956	TMPRSS2	O15393	492 aa		8.58	□□□□□ -1.04
PSMC6-208	ENST00000554956	RAB6A	P20340	208 aa		8.58	□□□□□ -1.04
PSMC6-208	ENST00000554956	RXRB	P28702	533 aa		8.58	□□□□□ -1.04
PSMC6-208	ENST00000554956	USP11	P51784	963 aa		8.58	□□□□□ -1.04
PSMC6-208	ENST00000554956	CCDC85B	Q15834	202 aa	Predicted RBP	8.58	□□□□□ -1.04
PSMC6-208	ENST00000554956	KIF4B	Q2VIQ3	1234 aa		8.58	□□□□□ -1.04
PSMC6-208	ENST00000554956	GPBAR1	Q8TDU6	330 aa		8.58	□□□□□ -1.04
PSMC6-208	ENST00000554956	FAM105A	Q9NUU6	356 aa		8.58	□□□□□ -1.04
PSMC6-208	ENST00000554956	HIF3A	Q9Y2N7	669 aa		8.58	□□□□□ -1.04
PSMC6-208	ENST00000554956	PCDHGC5	Q9Y5F6	944 aa		8.58	□□□□□ -1.04
PSMC6-208	ENST00000554956	SORBS3	O60504	671 aa		8.57	□□□□□ -1.04
PSMC6-208	ENST00000554956	MAP3K11	Q16584	847 aa		8.57	□□□□□ -1.04
PSMC6-208	ENST00000554956	SV2B	Q7L1I2	683 aa		8.57	□□□□□ -1.04
PSMC6-208	ENST00000554956	EMILIN2	Q9BXX0	1053 aa		8.57	□□□□□ -1.04
PSMC6-208	ENST00000554956	MRS2	Q9HD23	443 aa		8.57	□□□□□ -1.04
PSMC6-208	ENST00000554956	RUSC2	Q8N2Y8	1516 aa		8.56	□□□□□ -1.04
PSMC6-208	ENST00000554956	KIAA0586	Q9BVV6	1533 aa		8.56	□□□□□ -1.04
PSMC6-208	ENST00000554956	LLGL2	Q6P1M3	1020 aa		8.56	□□□□□ -1.04
PSMC6-208	ENST00000554956	CLEC10A	Q8IUN9	316 aa		8.56	□□□□□ -1.04
PSMC6-208	ENST00000554956	ACSBG1	Q96GR2	724 aa		8.56	□□□□□ -1.04
PSMC6-208	ENST00000554956	FAM83C	Q9BQN1	747 aa		8.56	□□□□□ -1.04
PSMC6-208	ENST00000554956	KIF27	Q86VH2	1401 aa		8.55	□□□□□ -1.04
PSMC6-208	ENST00000554956	ASPA	P45381	313 aa		8.55	□□□□□ -1.04
PSMC6-208	ENST00000554956	ID3	Q02535	119 aa		8.55	□□□□□ -1.04
PSMC6-208	ENST00000554956	TTBK2	Q6IQ55	1244 aa		8.55	□□□□□ -1.04
PSMC6-208	ENST00000554956	CRELD1	Q96HD1	420 aa		8.55	□□□□□ -1.04
PSMC6-208	ENST00000554956	CRIM1	Q9NZV1	1036 aa		8.55	□□□□□ -1.04
PSMC6-208	ENST00000554956	SAMM50	Q9Y512	469 aa		8.55	□□□□□ -1.04
PSMC6-208	ENST00000554956	ABCC10	Q5T3U5	1492 aa		8.54	□□□□□ -1.04
PSMC6-208	ENST00000554956	CARMIL1	Q5VZK9	1371 aa		8.54	□□□□□ -1.04
PSMC6-208	ENST00000554956	SLFN14	P0C7P3	912 aa		8.54	□□□□□ -1.04
PSMC6-208	ENST00000554956	ZNF16	P17020	682 aa	Predicted RBP	8.54	□□□□□ -1.04
PSMC6-208	ENST00000554956	PTPN11	Q06124	597 aa	Predicted RBP	8.54	□□□□□ -1.04
PSMC6-208	ENST00000554956	TAF1C	Q15572	869 aa	Predicted RBP	8.54	□□□□□ -1.04
PSMC6-208	ENST00000554956	ZNF326	Q5BKZ1	582 aa	Known RBP	8.54	□□□□□ -1.04
PSMC6-208	ENST00000554956	FANCD2OS	Q96PS1	177 aa		8.54	□□□□□ -1.04
PSMC6-208	ENST00000554956	GSX1	Q9H4S2	264 aa	Predicted RBP	8.54	□□□□□ -1.04
PSMC6-208	ENST00000554956	CACNA2D2	Q9NY47	1150 aa		8.54	□□□□□ -1.04
PSMC6-208	ENST00000554956	TTBK1	Q5TCY1	1321 aa	Predicted RBP	8.54	□□□□□ -1.04
PSMC6-208	ENST00000554956	SYNGAP1	Q96PV0	1343 aa		8.54	□□□□□ -1.04
PSMC6-208	ENST00000554956	FAM95C	A0A1B0GW59	222 aa		8.53	□□□□□ -1.04
PSMC6-208	ENST00000554956		F6X3S4	739 aa		8.53	□□□□□ -1.04
PSMC6-208	ENST00000554956	IGLV1-40	P01703	118 aa		8.53	□□□□□ -1.04
PSMC6-208	ENST00000554956	NFIC	P08651	508 aa		8.53	□□□□□ -1.04
PSMC6-208	ENST00000554956	NFIA	Q12857	509 aa		8.53	□□□□□ -1.04
PSMC6-208	ENST00000554956	NFKBIB	Q15653	356 aa		8.53	□□□□□ -1.04
PSMC6-208	ENST00000554956	RNF43	Q68DV7	783 aa		8.53	□□□□□ -1.04
PSMC6-208	ENST00000554956	SHISA5	Q8N114	240 aa		8.53	□□□□□ -1.04
PSMC6-208	ENST00000554956	SEMA6C	Q9H3T2	930 aa		8.53	□□□□□ -1.04
PSMC6-208	ENST00000554956	ACSS3	Q9H6R3	686 aa		8.53	□□□□□ -1.04
PSMC6-208	ENST00000554956	LGR6	Q9HBX8	967 aa		8.53	□□□□□ -1.04
PSMC6-208	ENST00000554956	DISC1	Q9NRI5	854 aa		8.53	□□□□□ -1.04
PSMC6-208	ENST00000554956	PODXL2	Q9NZ53	605 aa		8.53	□□□□□ -1.04
PSMC6-208	ENST00000554956	CSAD	Q9Y600	493 aa		8.53	□□□□□ -1.04
PSMC6-208	ENST00000554956	ADCY10	Q96PN6	1610 aa		8.52	□□□□□ -1.05
PSMC6-208	ENST00000554956	DYNC1LI2	O43237	492 aa	Predicted RBP	8.52	□□□□□ -1.05
PSMC6-208	ENST00000554956	TRIM37	O94972	964 aa		8.52	□□□□□ -1.05
PSMC6-208	ENST00000554956	LIG3	P49916	1009 aa		8.52	□□□□□ -1.05
PSMC6-208	ENST00000554956	LRRC14	Q15048	493 aa		8.52	□□□□□ -1.05
PSMC6-208	ENST00000554956	ZMYM1	Q5SVZ6	1142 aa		8.52	□□□□□ -1.05
PSMC6-208	ENST00000554956	EZH1	Q92800	747 aa	Predicted RBP	8.52	□□□□□ -1.05
PSMC6-208	ENST00000554956	GAL3ST3	Q96A11	431 aa		8.52	□□□□□ -1.05
PSMC6-208	ENST00000554956	MFSD14A	Q96MC6	490 aa		8.52	□□□□□ -1.05
PSMC6-208	ENST00000554956	DAGLA	Q9Y4D2	1042 aa		8.52	□□□□□ -1.05
PSMC6-208	ENST00000554956	PCDHB5	Q9Y5E4	795 aa		8.52	□□□□□ -1.05
PSMC6-208	ENST00000554956	PTPRG	P23470	1445 aa		8.52	□□□□□ -1.05
PSMC6-208	ENST00000554956	USP31	Q70CQ4	1352 aa		8.51	□□□□□ -1.05
PSMC6-208	ENST00000554956	KIR2DP1	A0A0G2JNF4	349 aa	Predicted RBP	8.51	□□□□□ -1.05
PSMC6-208	ENST00000554956	DCDC2C	A8MYV0	355 aa		8.51	□□□□□ -1.05
PSMC6-208	ENST00000554956	HCLS1	P14317	486 aa	Predicted RBP	8.51	□□□□□ -1.05
PSMC6-208	ENST00000554956	ST13	P50502	369 aa	Known RBP	8.51	□□□□□ -1.05
PSMC6-208	ENST00000554956	SEPT6	Q14141	434 aa		8.51	□□□□□ -1.05
PSMC6-208	ENST00000554956	MRPL58	Q14197	206 aa	Known RBP	8.51	□□□□□ -1.05
PSMC6-208	ENST00000554956	TTLL4	Q14679	1199 aa		8.51	□□□□□ -1.05
PSMC6-208	ENST00000554956	ZC3H12A	Q5D1E8	599 aa	Known RBP	8.51	□□□□□ -1.05
PSMC6-208	ENST00000554956	PAOX	Q6QHF9	649 aa		8.51	□□□□□ -1.05
PSMC6-208	ENST00000554956	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	8.51	□□□□□ -1.05
PSMC6-208	ENST00000554956	DBNDD2	Q9BQY9	259 aa		8.51	□□□□□ -1.05
PSMC6-208	ENST00000554956	YIPF2	Q9BWQ6	316 aa		8.51	□□□□□ -1.05
PSMC6-208	ENST00000554956	PCDHA4	Q9UN74	947 aa		8.51	□□□□□ -1.05
PSMC6-208	ENST00000554956	CYP8B1	Q9UNU6	501 aa		8.51	□□□□□ -1.05
PSMC6-208	ENST00000554956	MAPKBP1	O60336	1514 aa		8.5	□□□□□ -1.05

Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms