RNA–Protein interactions for RNA: ENST00000554514.1

ARHGEF40-203, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 2,928 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-203ENST00000554514 MYH3P11055 1940 aa18.13■□□□□ 0.49
ARHGEF40-203ENST00000554514 CBX1P83916 185 aa18.12■□□□□ 0.49
ARHGEF40-203ENST00000554514 NTRK3Q16288 839 aa18.12■□□□□ 0.49
ARHGEF40-203ENST00000554514 CCDC94Q9BW85 323 aaPredicted RBP18.12■□□□□ 0.49
ARHGEF40-203ENST00000554514 SPDYE4A6NLX3 237 aa18.12■□□□□ 0.49
ARHGEF40-203ENST00000554514 SMTNL1A8MU46 457 aa18.12■□□□□ 0.49
ARHGEF40-203ENST00000554514 GSG1L2A8MUP6 293 aa18.12■□□□□ 0.49
ARHGEF40-203ENST00000554514 MINDY4BA8MYZ0 360 aa18.12■□□□□ 0.49
ARHGEF40-203ENST00000554514 ATP1A3P13637 1013 aa18.12■□□□□ 0.49
ARHGEF40-203ENST00000554514 PTPN14Q15678 1187 aa18.12■□□□□ 0.49
ARHGEF40-203ENST00000554514 UTP14AQ9BVJ6 771 aaKnown RBP18.12■□□□□ 0.49
ARHGEF40-203ENST00000554514 ATRNO75882 1429 aa18.12■□□□□ 0.49
ARHGEF40-203ENST00000554514 LRP6O75581 1613 aa18.12■□□□□ 0.49
ARHGEF40-203ENST00000554514 NUP98P52948 1817 aa18.12■□□□□ 0.49
ARHGEF40-203ENST00000554514 BTBD18B2RXH4 712 aa18.12■□□□□ 0.49
ARHGEF40-203ENST00000554514 ERVV-1B6SEH8 477 aa18.12■□□□□ 0.49
ARHGEF40-203ENST00000554514 AKNAD1Q5T1N1 836 aa18.12■□□□□ 0.49
ARHGEF40-203ENST00000554514 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.12■□□□□ 0.49
ARHGEF40-203ENST00000554514 WTIPA6NIX2 430 aaPredicted RBP18.11■□□□□ 0.49
ARHGEF40-203ENST00000554514 SMIM22K7EJ46 135 aa18.11■□□□□ 0.49
ARHGEF40-203ENST00000554514 TPM4P67936 248 aa18.11■□□□□ 0.49
ARHGEF40-203ENST00000554514 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.11■□□□□ 0.49
ARHGEF40-203ENST00000554514 NIP7Q9Y221 180 aaKnown RBP eCLIP18.11■□□□□ 0.49
ARHGEF40-203ENST00000554514 V9GYY5 206 aaPredicted RBP18.11■□□□□ 0.49
ARHGEF40-203ENST00000554514 ADAMTS2O95450 1211 aa18.11■□□□□ 0.49
ARHGEF40-203ENST00000554514 JMYQ8N9B5 988 aa18.11■□□□□ 0.49
ARHGEF40-203ENST00000554514 SDR42E1Q8WUS8 393 aa18.11■□□□□ 0.49
ARHGEF40-203ENST00000554514 NEMFO60524 1076 aa18.1■□□□□ 0.49
ARHGEF40-203ENST00000554514 IGHMBP2P38935 993 aaKnown RBP18.1■□□□□ 0.49
ARHGEF40-203ENST00000554514 CRKLP46109 303 aaKnown RBP18.1■□□□□ 0.49
ARHGEF40-203ENST00000554514 PTPAQ15257 358 aa18.1■□□□□ 0.49
ARHGEF40-203ENST00000554514 FOXN1O15353 648 aa18.1■□□□□ 0.49
ARHGEF40-203ENST00000554514 WTAPQ15007 396 aa18.1■□□□□ 0.49
ARHGEF40-203ENST00000554514 MAP3K14Q99558 947 aa18.1■□□□□ 0.49
ARHGEF40-203ENST00000554514 SLIT2O94813 1529 aa18.1■□□□□ 0.49
ARHGEF40-203ENST00000554514 LONRF3Q496Y0 759 aa18.09■□□□□ 0.49
ARHGEF40-203ENST00000554514 NACAP1Q9BZK3 213 aa18.09■□□□□ 0.49
ARHGEF40-203ENST00000554514 U2AF2P26368 475 aaKnown RBP eCLIP18.09■□□□□ 0.49
ARHGEF40-203ENST00000554514 RBM6P78332 1123 aaKnown RBP18.09■□□□□ 0.49
ARHGEF40-203ENST00000554514 NCBP1Q09161 790 aaKnown RBP18.09■□□□□ 0.49
ARHGEF40-203ENST00000554514 NCAPHQ15003 741 aa18.09■□□□□ 0.49
ARHGEF40-203ENST00000554514 RTN1Q16799 776 aa18.09■□□□□ 0.49
ARHGEF40-203ENST00000554514 INTS5Q6P9B9 1019 aaKnown RBP18.09■□□□□ 0.49
ARHGEF40-203ENST00000554514 CNNM3Q8NE01 707 aa18.09■□□□□ 0.49
ARHGEF40-203ENST00000554514 CCDC87Q9NVE4 849 aa18.09■□□□□ 0.49
ARHGEF40-203ENST00000554514 hCG_1642624A0A1W2PR95 340 aa18.09■□□□□ 0.49
ARHGEF40-203ENST00000554514 ERICH2A1L162 156 aa18.09■□□□□ 0.49
ARHGEF40-203ENST00000554514 CTIFO43310 598 aaKnown RBP18.09■□□□□ 0.49
ARHGEF40-203ENST00000554514 CYP7A1P22680 504 aa18.09■□□□□ 0.49
ARHGEF40-203ENST00000554514 EIF5P55010 431 aaKnown RBP18.09■□□□□ 0.49
ARHGEF40-203ENST00000554514 GRIN1Q05586 938 aa18.09■□□□□ 0.49
ARHGEF40-203ENST00000554514 CCDC152Q4G0S7 254 aa18.09■□□□□ 0.49
ARHGEF40-203ENST00000554514 ARMCX5Q6P1M9 558 aa18.09■□□□□ 0.49
ARHGEF40-203ENST00000554514 SGMS1Q86VZ5 419 aa18.09■□□□□ 0.49
ARHGEF40-203ENST00000554514 DIS3L2Q8IYB7 885 aaKnown RBP18.09■□□□□ 0.49
ARHGEF40-203ENST00000554514 RAI14Q9P0K7 980 aa18.09■□□□□ 0.49
ARHGEF40-203ENST00000554514 SERPINC1P01008 464 aa18.08■□□□□ 0.49
ARHGEF40-203ENST00000554514 FANCCQ00597 558 aa18.08■□□□□ 0.49
ARHGEF40-203ENST00000554514 CHRNDQ07001 517 aa18.08■□□□□ 0.49
ARHGEF40-203ENST00000554514 NR5A1Q13285 461 aa18.08■□□□□ 0.49
ARHGEF40-203ENST00000554514 CCAR2Q8N163 923 aaKnown RBP18.08■□□□□ 0.49
ARHGEF40-203ENST00000554514 KRT23Q9C075 422 aa18.08■□□□□ 0.49
ARHGEF40-203ENST00000554514 PPP6R2O75170 966 aa18.08■□□□□ 0.48
ARHGEF40-203ENST00000554514 GOLGA8FQ08AF8 430 aa18.08■□□□□ 0.48
ARHGEF40-203ENST00000554514 GOLGA8DPQ0D2H9 430 aa18.08■□□□□ 0.48
ARHGEF40-203ENST00000554514 SAFBQ15424 915 aaKnown RBP eCLIP18.08■□□□□ 0.48
ARHGEF40-203ENST00000554514 PDILTQ8N807 584 aa18.08■□□□□ 0.48
ARHGEF40-203ENST00000554514 KCNH3Q9ULD8 1083 aa18.08■□□□□ 0.48
ARHGEF40-203ENST00000554514 PAXBP1Q9Y5B6 917 aa18.08■□□□□ 0.48
ARHGEF40-203ENST00000554514 FMNL1O95466 1100 aaPredicted RBP18.07■□□□□ 0.48
ARHGEF40-203ENST00000554514 SFPQP23246 707 aaKnown RBP eCLIP18.07■□□□□ 0.48
ARHGEF40-203ENST00000554514 LIFRP42702 1097 aa18.07■□□□□ 0.48
ARHGEF40-203ENST00000554514 GYG1P46976 350 aa18.07■□□□□ 0.48
ARHGEF40-203ENST00000554514 GSDMDP57764 484 aa18.07■□□□□ 0.48
ARHGEF40-203ENST00000554514 SART3Q15020 963 aaKnown RBP18.07■□□□□ 0.48
ARHGEF40-203ENST00000554514 ALX1Q15699 326 aa18.07■□□□□ 0.48
ARHGEF40-203ENST00000554514 ADGRA1Q86SQ6 560 aa18.07■□□□□ 0.48
ARHGEF40-203ENST00000554514 TRIM22Q8IYM9 498 aa18.07■□□□□ 0.48
ARHGEF40-203ENST00000554514 DPF2Q92785 391 aa18.07■□□□□ 0.48
ARHGEF40-203ENST00000554514 CNNM2Q9H8M5 875 aa18.07■□□□□ 0.48
ARHGEF40-203ENST00000554514 ANKRD36CQ5JPF3 1778 aa18.07■□□□□ 0.48
ARHGEF40-203ENST00000554514 RESP18Q5W5W9 173 aa18.07■□□□□ 0.48
ARHGEF40-203ENST00000554514 METTL16Q86W50 562 aaKnown RBP18.07■□□□□ 0.48
ARHGEF40-203ENST00000554514 NOSTRINQ8IVI9 506 aa18.07■□□□□ 0.48
ARHGEF40-203ENST00000554514 DDX60Q8IY21 1712 aaKnown RBP18.06■□□□□ 0.48
ARHGEF40-203ENST00000554514 NPHP1O15259 732 aa18.06■□□□□ 0.48
ARHGEF40-203ENST00000554514 CFAP100Q494V2 611 aa18.06■□□□□ 0.48
ARHGEF40-203ENST00000554514 BPIFA3Q9BQP9 254 aa18.06■□□□□ 0.48
ARHGEF40-203ENST00000554514 HPSEQ9Y251 543 aa18.06■□□□□ 0.48
ARHGEF40-203ENST00000554514 CYP2D7A0A087X1C5 515 aa18.06■□□□□ 0.48
ARHGEF40-203ENST00000554514 KCNQ4P56696 695 aa18.06■□□□□ 0.48
ARHGEF40-203ENST00000554514 BICDL1Q6ZP65 573 aa18.06■□□□□ 0.48
ARHGEF40-203ENST00000554514 SMIM5Q71RC9 77 aa18.06■□□□□ 0.48
ARHGEF40-203ENST00000554514 GRAMD1CQ8IYS0 662 aa18.06■□□□□ 0.48
ARHGEF40-203ENST00000554514 UBAC1Q9BSL1 405 aa18.06■□□□□ 0.48
ARHGEF40-203ENST00000554514 PRDM1O75626 825 aa18.05■□□□□ 0.48
ARHGEF40-203ENST00000554514 ITPK1Q13572 414 aa18.05■□□□□ 0.48
ARHGEF40-203ENST00000554514 OLFM4Q6UX06 510 aa18.05■□□□□ 0.48
ARHGEF40-203ENST00000554514 KRI1Q8N9T8 703 aaKnown RBP18.05■□□□□ 0.48
ARHGEF40-203ENST00000554514 OXER1Q8TDS5 423 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms