RNA–Protein interactions for RNA: ENST00000553846.1

PRKCH-208, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-208ENST00000553846 FANCIQ9NVI1 1328 aa11.51□□□□□ -0.57
PRKCH-208ENST00000553846 KCNA4P22459 653 aa11.5□□□□□ -0.57
PRKCH-208ENST00000553846 MAGEA10P43363 369 aaPredicted RBP11.5□□□□□ -0.57
PRKCH-208ENST00000553846 CHAF1AQ13111 956 aaPredicted RBP11.5□□□□□ -0.57
PRKCH-208ENST00000553846 LRRC24Q50LG9 513 aa11.5□□□□□ -0.57
PRKCH-208ENST00000553846 CDC42EP5Q6NZY7 148 aa11.5□□□□□ -0.57
PRKCH-208ENST00000553846 ZFPM1Q8IX07 1006 aa11.5□□□□□ -0.57
PRKCH-208ENST00000553846 ANKLE1Q8NAG6 615 aa11.5□□□□□ -0.57
PRKCH-208ENST00000553846 SUCLG2Q96I99 432 aa11.5□□□□□ -0.57
PRKCH-208ENST00000553846 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.5□□□□□ -0.57
PRKCH-208ENST00000553846 TMOD2Q9NZR1 351 aa11.5□□□□□ -0.57
PRKCH-208ENST00000553846 AFG3L2Q9Y4W6 797 aa11.5□□□□□ -0.57
PRKCH-208ENST00000553846 MAST3O60307 1309 aa11.5□□□□□ -0.57
PRKCH-208ENST00000553846 MAST2Q6P0Q8 1798 aa11.49□□□□□ -0.57
PRKCH-208ENST00000553846 TFRCP02786 760 aaKnown RBP11.49□□□□□ -0.57
PRKCH-208ENST00000553846 PTPRAP18433 802 aa11.49□□□□□ -0.57
PRKCH-208ENST00000553846 TAF7LQ5H9L4 462 aa11.49□□□□□ -0.57
PRKCH-208ENST00000553846 NECAB2Q7Z6G3 386 aa11.49□□□□□ -0.57
PRKCH-208ENST00000553846 POTEDQ86YR6 584 aa11.49□□□□□ -0.57
PRKCH-208ENST00000553846 C7orf61Q8IZ16 206 aa11.49□□□□□ -0.57
PRKCH-208ENST00000553846 TDHQ8IZJ6 230 aa11.49□□□□□ -0.57
PRKCH-208ENST00000553846 ANKRD44Q8N8A2 993 aa11.49□□□□□ -0.57
PRKCH-208ENST00000553846 GUCD1Q96NT3 240 aa11.49□□□□□ -0.57
PRKCH-208ENST00000553846 ZMYND8Q9ULU4 1186 aaPredicted RBP11.49□□□□□ -0.57
PRKCH-208ENST00000553846 PFASO15067 1338 aa11.49□□□□□ -0.57
PRKCH-208ENST00000553846 TNPO2O14787 897 aaKnown RBP11.48□□□□□ -0.57
PRKCH-208ENST00000553846 PDE8BO95263 885 aa11.48□□□□□ -0.57
PRKCH-208ENST00000553846 DDX10Q13206 875 aaKnown RBP11.48□□□□□ -0.57
PRKCH-208ENST00000553846 DIXDC1Q155Q3 683 aa11.48□□□□□ -0.57
PRKCH-208ENST00000553846 NCBP3Q53F19 620 aaKnown RBP11.48□□□□□ -0.57
PRKCH-208ENST00000553846 SH3BP5LQ7L8J4 393 aa11.48□□□□□ -0.57
PRKCH-208ENST00000553846 SCYL3Q8IZE3 742 aa11.48□□□□□ -0.57
PRKCH-208ENST00000553846 GJD2Q9UKL4 321 aa11.48□□□□□ -0.57
PRKCH-208ENST00000553846 AK9Q5TCS8 1911 aa11.48□□□□□ -0.57
PRKCH-208ENST00000553846 FRMPD3Q5JV73 1810 aa11.47□□□□□ -0.57
PRKCH-208ENST00000553846 POTEB2H3BUK9 544 aa11.47□□□□□ -0.57
PRKCH-208ENST00000553846 ALDH1L1O75891 902 aa11.47□□□□□ -0.57
PRKCH-208ENST00000553846 NBPF7P0C2Y1 421 aaPredicted RBP11.47□□□□□ -0.57
PRKCH-208ENST00000553846 SLURP2P0DP57 97 aa11.47□□□□□ -0.57
PRKCH-208ENST00000553846 COL6A1P12109 1028 aa11.47□□□□□ -0.57
PRKCH-208ENST00000553846 TCP10Q12799 353 aa11.47□□□□□ -0.57
PRKCH-208ENST00000553846 TRIM32Q13049 653 aa11.47□□□□□ -0.57
PRKCH-208ENST00000553846 FAM110CQ1W6H9 321 aa11.47□□□□□ -0.57
PRKCH-208ENST00000553846 MAP3K21Q5TCX8 1036 aa11.47□□□□□ -0.57
PRKCH-208ENST00000553846 FASTKD5Q7L8L6 764 aaKnown RBP11.47□□□□□ -0.57
PRKCH-208ENST00000553846 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.47□□□□□ -0.57
PRKCH-208ENST00000553846 OGDHLQ9ULD0 1010 aa11.47□□□□□ -0.57
PRKCH-208ENST00000553846 LTBP2Q14767 1821 aa11.46□□□□□ -0.57
PRKCH-208ENST00000553846 ZBTB22O15209 634 aa11.46□□□□□ -0.57
PRKCH-208ENST00000553846 HMGCRP04035 888 aa11.46□□□□□ -0.57
PRKCH-208ENST00000553846 SYN1P17600 705 aa11.46□□□□□ -0.57
PRKCH-208ENST00000553846 PRDX5P30044 214 aa11.46□□□□□ -0.57
PRKCH-208ENST00000553846 TREML2Q5T2D2 321 aa11.46□□□□□ -0.57
PRKCH-208ENST00000553846 FAM109BQ6ICB4 259 aaPredicted RBP11.46□□□□□ -0.57
PRKCH-208ENST00000553846 IDI2Q9BXS1 227 aa11.46□□□□□ -0.57
PRKCH-208ENST00000553846 BICC1Q9H694 974 aaKnown RBP11.46□□□□□ -0.57
PRKCH-208ENST00000553846 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.46□□□□□ -0.57
PRKCH-208ENST00000553846 AGTPBP1Q9UPW5 1226 aa11.46□□□□□ -0.57
PRKCH-208ENST00000553846 ZHX2Q9Y6X8 837 aa11.46□□□□□ -0.57
PRKCH-208ENST00000553846 MYH2Q9UKX2 1941 aa11.46□□□□□ -0.58
PRKCH-208ENST00000553846 GAKO14976 1311 aa11.45□□□□□ -0.58
PRKCH-208ENST00000553846 RPTORQ8N122 1335 aa11.45□□□□□ -0.58
PRKCH-208ENST00000553846 ATAD5Q96QE3 1844 aa11.45□□□□□ -0.58
PRKCH-208ENST00000553846 CAVIN4Q5BKX8 364 aa11.45□□□□□ -0.58
PRKCH-208ENST00000553846 METTL24Q5JXM2 366 aa11.45□□□□□ -0.58
PRKCH-208ENST00000553846 VPS37DQ86XT2 251 aa11.45□□□□□ -0.58
PRKCH-208ENST00000553846 NBPF3Q9H094 633 aa11.45□□□□□ -0.58
PRKCH-208ENST00000553846 SIPA1L1O43166 1804 aa11.44□□□□□ -0.58
PRKCH-208ENST00000553846 SALL1Q9NSC2 1324 aa11.44□□□□□ -0.58
PRKCH-208ENST00000553846 PUM3Q15397 648 aaKnown RBP11.44□□□□□ -0.58
PRKCH-208ENST00000553846 CCDC184Q52MB2 194 aa11.44□□□□□ -0.58
PRKCH-208ENST00000553846 ANKRD13CQ8N6S4 541 aa11.44□□□□□ -0.58
PRKCH-208ENST00000553846 KLHDC4Q8TBB5 520 aa11.44□□□□□ -0.58
PRKCH-208ENST00000553846 WDR66Q8TBY9 1149 aa11.44□□□□□ -0.58
PRKCH-208ENST00000553846 TRIB2Q92519 343 aa11.44□□□□□ -0.58
PRKCH-208ENST00000553846 C11orf49Q9H6J7 331 aa11.44□□□□□ -0.58
PRKCH-208ENST00000553846 SPINK5Q9NQ38 1064 aaPredicted RBP11.44□□□□□ -0.58
PRKCH-208ENST00000553846 DDTLA6NHG4 134 aaPredicted RBP11.43□□□□□ -0.58
PRKCH-208ENST00000553846 ENTPD3O75355 529 aa11.43□□□□□ -0.58
PRKCH-208ENST00000553846 RFX5P48382 616 aaPredicted RBP11.43□□□□□ -0.58
PRKCH-208ENST00000553846 RGS3P49796 1198 aa11.43□□□□□ -0.58
PRKCH-208ENST00000553846 EXOSC9Q06265 439 aaKnown RBP11.43□□□□□ -0.58
PRKCH-208ENST00000553846 GADL1Q6ZQY3 521 aa11.43□□□□□ -0.58
PRKCH-208ENST00000553846 CCDC84Q86UT8 332 aaPredicted RBP11.43□□□□□ -0.58
PRKCH-208ENST00000553846 SMCR8Q8TEV9 937 aaPredicted RBP11.43□□□□□ -0.58
PRKCH-208ENST00000553846 COA7Q96BR5 231 aa11.43□□□□□ -0.58
PRKCH-208ENST00000553846 UBE2OQ9C0C9 1292 aaKnown RBP11.43□□□□□ -0.58
PRKCH-208ENST00000553846 SRCIN1Q9C0H9 1055 aa11.43□□□□□ -0.58
PRKCH-208ENST00000553846 DDX4Q9NQI0 724 aaKnown RBP11.43□□□□□ -0.58
PRKCH-208ENST00000553846 C9orf78Q9NZ63 289 aaPredicted RBP11.43□□□□□ -0.58
PRKCH-208ENST00000553846 TRIM75PA6NK02 468 aa11.42□□□□□ -0.58
PRKCH-208ENST00000553846 CTNND1O60716 968 aaKnown RBP11.42□□□□□ -0.58
PRKCH-208ENST00000553846 FRAT2O75474 233 aaPredicted RBP11.42□□□□□ -0.58
PRKCH-208ENST00000553846 LRRC26Q2I0M4 334 aa11.42□□□□□ -0.58
PRKCH-208ENST00000553846 ATG9AQ7Z3C6 839 aa11.42□□□□□ -0.58
PRKCH-208ENST00000553846 HMX1Q9NP08 348 aaPredicted RBP11.42□□□□□ -0.58
PRKCH-208ENST00000553846 PICK1Q9NRD5 415 aa11.42□□□□□ -0.58
PRKCH-208ENST00000553846 USP40Q9NVE5 1235 aa11.42□□□□□ -0.58
PRKCH-208ENST00000553846 MORF4L1Q9UBU8 362 aa11.42□□□□□ -0.58
PRKCH-208ENST00000553846 CHD9Q3L8U1 2897 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms