RNA–Protein interactions for RNA: ENST00000553683.1

VRK1-202, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 247 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-202ENST00000553683 PIDD1Q9HB75 910 aa5.83□□□□□ -1.48
VRK1-202ENST00000553683 RNF19AQ9NV58 838 aa5.83□□□□□ -1.48
VRK1-202ENST00000553683 PRKAG2Q9UGJ0 569 aa5.83□□□□□ -1.48
VRK1-202ENST00000553683 SNCAIPQ9Y6H5 919 aa5.83□□□□□ -1.48
VRK1-202ENST00000553683 LIG3P49916 1009 aa5.82□□□□□ -1.48
VRK1-202ENST00000553683 LRP8Q14114 963 aa5.82□□□□□ -1.48
VRK1-202ENST00000553683 NFKBIBQ15653 356 aa5.82□□□□□ -1.48
VRK1-202ENST00000553683 ZAR1Q86SH2 424 aa5.82□□□□□ -1.48
VRK1-202ENST00000553683 KCT2Q8NC54 265 aa5.82□□□□□ -1.48
VRK1-202ENST00000553683 GRIN3AQ8TCU5 1115 aa5.82□□□□□ -1.48
VRK1-202ENST00000553683 GIPC2Q8TF65 315 aa5.82□□□□□ -1.48
VRK1-202ENST00000553683 RSRP1Q9BUV0 290 aa5.82□□□□□ -1.48
VRK1-202ENST00000553683 VTI1BQ9UEU0 232 aa5.82□□□□□ -1.48
VRK1-202ENST00000553683 PCOLCE2Q9UKZ9 415 aa5.82□□□□□ -1.48
VRK1-202ENST00000553683 COBLO75128 1261 aa5.81□□□□□ -1.48
VRK1-202ENST00000553683 NFICP08651 508 aa5.81□□□□□ -1.48
VRK1-202ENST00000553683 ZNF16P17020 682 aaPredicted RBP5.81□□□□□ -1.48
VRK1-202ENST00000553683 LMNB1P20700 586 aa5.81□□□□□ -1.48
VRK1-202ENST00000553683 GRIK1P39086 918 aa5.81□□□□□ -1.48
VRK1-202ENST00000553683 TAGLNQ01995 201 aaKnown RBP5.81□□□□□ -1.48
VRK1-202ENST00000553683 TRIM26Q12899 539 aaPredicted RBP5.81□□□□□ -1.48
VRK1-202ENST00000553683 MEI1Q5TIA1 1274 aa5.81□□□□□ -1.48
VRK1-202ENST00000553683 SMYD4Q8IYR2 804 aaPredicted RBP5.81□□□□□ -1.48
VRK1-202ENST00000553683 GATA6Q92908 595 aa5.81□□□□□ -1.48
VRK1-202ENST00000553683 ATG3Q9NT62 314 aa5.81□□□□□ -1.48
VRK1-202ENST00000553683 PRR19A6NJB7 356 aa5.8□□□□□ -1.48
VRK1-202ENST00000553683 RAB6AP20340 208 aa5.8□□□□□ -1.48
VRK1-202ENST00000553683 VAMP1P23763 118 aa5.8□□□□□ -1.48
VRK1-202ENST00000553683 TTLL4Q14679 1199 aa5.8□□□□□ -1.48
VRK1-202ENST00000553683 ARTNQ5T4W7 220 aa5.8□□□□□ -1.48
VRK1-202ENST00000553683 RASIP1Q5U651 963 aa5.8□□□□□ -1.48
VRK1-202ENST00000553683 HDXQ7Z353 690 aa5.8□□□□□ -1.48
VRK1-202ENST00000553683 SHKBP1Q8TBC3 707 aa5.8□□□□□ -1.48
VRK1-202ENST00000553683 GAL3ST3Q96A11 431 aa5.8□□□□□ -1.48
VRK1-202ENST00000553683 FAM161BQ96MY7 647 aa5.8□□□□□ -1.48
VRK1-202ENST00000553683 C1GALT1Q9NS00 363 aa5.8□□□□□ -1.48
VRK1-202ENST00000553683 PCDHA4Q9UN74 947 aa5.8□□□□□ -1.48
VRK1-202ENST00000553683 KIAA1324LA8MWY0 1029 aaPredicted RBP5.79□□□□□ -1.48
VRK1-202ENST00000553683 F13BP05160 661 aa5.79□□□□□ -1.48
VRK1-202ENST00000553683 CAP2P40123 477 aa5.79□□□□□ -1.48
VRK1-202ENST00000553683 CD97P48960 835 aa5.79□□□□□ -1.48
VRK1-202ENST00000553683 TSNAXIP1Q2TAA8 658 aa5.79□□□□□ -1.48
VRK1-202ENST00000553683 DUSP27Q5VZP5 1158 aa5.79□□□□□ -1.48
VRK1-202ENST00000553683 OGFOD3Q6PK18 319 aa5.79□□□□□ -1.48
VRK1-202ENST00000553683 CYFIP1Q7L576 1253 aa5.79□□□□□ -1.48
VRK1-202ENST00000553683 PHC3Q8NDX5 983 aa5.79□□□□□ -1.48
VRK1-202ENST00000553683 MFSD14AQ96MC6 490 aa5.79□□□□□ -1.48
VRK1-202ENST00000553683 TBC1D32Q96NH3 1257 aa5.79□□□□□ -1.48
VRK1-202ENST00000553683 MIR1-1HGQ9H1L0 117 aa5.79□□□□□ -1.48
VRK1-202ENST00000553683 PIM2Q9P1W9 311 aa5.79□□□□□ -1.48
VRK1-202ENST00000553683 LOC100996750A0A140TA64 210 aa5.78□□□□□ -1.48
VRK1-202ENST00000553683 WDR64B1ANS9 1081 aa5.78□□□□□ -1.48
VRK1-202ENST00000553683 LMNB2Q03252 620 aa5.78□□□□□ -1.48
VRK1-202ENST00000553683 CYP27C1Q4G0S4 372 aa5.78□□□□□ -1.48
VRK1-202ENST00000553683 ZBTB37Q5TC79 503 aa5.78□□□□□ -1.48
VRK1-202ENST00000553683 MPRIPQ6WCQ1 1025 aa5.78□□□□□ -1.48
VRK1-202ENST00000553683 RELL1Q8IUW5 271 aa5.78□□□□□ -1.48
VRK1-202ENST00000553683 ZNF507Q8TCN5 953 aa5.78□□□□□ -1.48
VRK1-202ENST00000553683 ISL2Q96A47 359 aa5.78□□□□□ -1.48
VRK1-202ENST00000553683 ELMO3Q96BJ8 720 aa5.78□□□□□ -1.48
VRK1-202ENST00000553683 TMEM74Q96NL1 305 aa5.78□□□□□ -1.48
VRK1-202ENST00000553683 PSMG3-AS1Q96PY0 264 aa5.78□□□□□ -1.48
VRK1-202ENST00000553683 OSBPL1AQ9BXW6 950 aa5.78□□□□□ -1.48
VRK1-202ENST00000553683 KRTAP4-6Q9BYQ5 205 aa5.78□□□□□ -1.48
VRK1-202ENST00000553683 ZFP64Q9NPA5 681 aa5.78□□□□□ -1.48
VRK1-202ENST00000553683 LEMD3Q9Y2U8 911 aa5.78□□□□□ -1.48
VRK1-202ENST00000553683 DAGLAQ9Y4D2 1042 aa5.78□□□□□ -1.48
VRK1-202ENST00000553683 NEFMP07197 916 aa5.77□□□□□ -1.49
VRK1-202ENST00000553683 HCLS1P14317 486 aaPredicted RBP5.77□□□□□ -1.49
VRK1-202ENST00000553683 FOSL1P15407 271 aa5.77□□□□□ -1.49
VRK1-202ENST00000553683 TFE3P19532 575 aaPredicted RBP5.77□□□□□ -1.49
VRK1-202ENST00000553683 NTF4P34130 210 aa5.77□□□□□ -1.49
VRK1-202ENST00000553683 ADMP35318 185 aa5.77□□□□□ -1.49
VRK1-202ENST00000553683 RPL6Q02878 288 aaKnown RBP5.77□□□□□ -1.49
VRK1-202ENST00000553683 ERMP1Q7Z2K6 904 aa5.77□□□□□ -1.49
VRK1-202ENST00000553683 WNT10AQ9GZT5 417 aa5.77□□□□□ -1.49
VRK1-202ENST00000553683 MKNK2Q9HBH9 465 aa5.77□□□□□ -1.49
VRK1-202ENST00000553683 KCNQ5Q9NR82 932 aa5.77□□□□□ -1.49
VRK1-202ENST00000553683 GFRA2O00451 464 aa5.76□□□□□ -1.49
VRK1-202ENST00000553683 HYAL3O43820 417 aaPredicted RBP5.76□□□□□ -1.49
VRK1-202ENST00000553683 RNGTTO60942 597 aaKnown RBP5.76□□□□□ -1.49
VRK1-202ENST00000553683 TGFB1P01137 390 aa5.76□□□□□ -1.49
VRK1-202ENST00000553683 PTPN11Q06124 597 aaPredicted RBP5.76□□□□□ -1.49
VRK1-202ENST00000553683 PPM1JQ5JR12 505 aa5.76□□□□□ -1.49
VRK1-202ENST00000553683 LRFN4Q6PJG9 635 aa5.76□□□□□ -1.49
VRK1-202ENST00000553683 CDC37L1Q7L3B6 337 aa5.76□□□□□ -1.49
VRK1-202ENST00000553683 DTX1Q86Y01 620 aa5.76□□□□□ -1.49
VRK1-202ENST00000553683 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.76□□□□□ -1.49
VRK1-202ENST00000553683 Q8N3U1 123 aa5.76□□□□□ -1.49
VRK1-202ENST00000553683 RHOVQ96L33 236 aa5.76□□□□□ -1.49
VRK1-202ENST00000553683 METTL5Q9NRN9 209 aaKnown RBP5.76□□□□□ -1.49
VRK1-202ENST00000553683 ROBO2Q9HCK4 1378 aa5.76□□□□□ -1.49
VRK1-202ENST00000553683 DCDC2CA8MYV0 355 aa5.75□□□□□ -1.49
VRK1-202ENST00000553683 DYNC1LI2O43237 492 aaPredicted RBP5.75□□□□□ -1.49
VRK1-202ENST00000553683 CAMK2GQ13555 558 aaPredicted RBP5.75□□□□□ -1.49
VRK1-202ENST00000553683 INPP5AQ14642 412 aa5.75□□□□□ -1.49
VRK1-202ENST00000553683 HS2ST1Q7LGA3 356 aa5.75□□□□□ -1.49
VRK1-202ENST00000553683 C12orf40Q86WS4 652 aa5.75□□□□□ -1.49
VRK1-202ENST00000553683 FBXL6Q8N531 539 aa5.75□□□□□ -1.49
VRK1-202ENST00000553683 GATAD2BQ8WXI9 593 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms