RNA–Protein interactions for RNA: ENST00000553656.5

TUBB3-202, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 550 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-202ENST00000553656 CHGBP05060 677 aa16.65■□□□□ 0.26
TUBB3-202ENST00000553656 FKBP1BP68106 108 aa16.65■□□□□ 0.26
TUBB3-202ENST00000553656 ARMC9Q7Z3E5 817 aa16.65■□□□□ 0.26
TUBB3-202ENST00000553656 MAPKAPK5Q8IW41 473 aa16.65■□□□□ 0.26
TUBB3-202ENST00000553656 LCORLQ8N3X6 602 aa16.65■□□□□ 0.26
TUBB3-202ENST00000553656 TEPSINQ96N21 525 aa16.65■□□□□ 0.26
TUBB3-202ENST00000553656 OSBPL5Q9H0X9 879 aaPredicted RBP16.65■□□□□ 0.26
TUBB3-202ENST00000553656 DDX4Q9NQI0 724 aaKnown RBP16.65■□□□□ 0.26
TUBB3-202ENST00000553656 FLT1P17948 1338 aa16.65■□□□□ 0.26
TUBB3-202ENST00000553656 GSPT1P15170 499 aaKnown RBP16.64■□□□□ 0.25
TUBB3-202ENST00000553656 PRKG1Q13976 671 aa16.64■□□□□ 0.25
TUBB3-202ENST00000553656 DCAF15Q66K64 600 aa16.64■□□□□ 0.25
TUBB3-202ENST00000553656 CSRNP1Q96S65 589 aa16.64■□□□□ 0.25
TUBB3-202ENST00000553656 PUS7LQ9H0K6 701 aaKnown RBP16.64■□□□□ 0.25
TUBB3-202ENST00000553656 DIAPH3Q9NSV4 1193 aa16.64■□□□□ 0.25
TUBB3-202ENST00000553656 AK9Q5TCS8 1911 aa16.64■□□□□ 0.25
TUBB3-202ENST00000553656 PAPPA2Q9BXP8 1791 aa16.64■□□□□ 0.25
TUBB3-202ENST00000553656 COL2A1P02458 1487 aaPredicted RBP16.63■□□□□ 0.25
TUBB3-202ENST00000553656 GNAT2P19087 354 aa16.63■□□□□ 0.25
TUBB3-202ENST00000553656 SDSP20132 328 aa16.63■□□□□ 0.25
TUBB3-202ENST00000553656 ZMYM1Q5SVZ6 1142 aa16.63■□□□□ 0.25
TUBB3-202ENST00000553656 CDAN1Q8IWY9 1227 aa16.63■□□□□ 0.25
TUBB3-202ENST00000553656 ZFPM1Q8IX07 1006 aa16.63■□□□□ 0.25
TUBB3-202ENST00000553656 OSBP2Q969R2 916 aa16.63■□□□□ 0.25
TUBB3-202ENST00000553656 DHX36Q9H2U1 1008 aaKnown RBP16.63■□□□□ 0.25
TUBB3-202ENST00000553656 ANGEL1Q9UNK9 670 aaKnown RBP16.63■□□□□ 0.25
TUBB3-202ENST00000553656 SLC4A4Q9Y6R1 1079 aa16.63■□□□□ 0.25
TUBB3-202ENST00000553656 GPAA1O43292 621 aa16.62■□□□□ 0.25
TUBB3-202ENST00000553656 HLA-DOAP06340 250 aa16.62■□□□□ 0.25
TUBB3-202ENST00000553656 IREB2P48200 963 aaKnown RBP16.62■□□□□ 0.25
TUBB3-202ENST00000553656 HUNKP57058 714 aa16.62■□□□□ 0.25
TUBB3-202ENST00000553656 PAXIP1Q6ZW49 1069 aaPredicted RBP16.62■□□□□ 0.25
TUBB3-202ENST00000553656 SKAP1Q86WV1 359 aa16.62■□□□□ 0.25
TUBB3-202ENST00000553656 AMOTL1Q8IY63 956 aa16.62■□□□□ 0.25
TUBB3-202ENST00000553656 SDR42E1Q8WUS8 393 aa16.62■□□□□ 0.25
TUBB3-202ENST00000553656 TRIM34Q9BYJ4 488 aa16.62■□□□□ 0.25
TUBB3-202ENST00000553656 HELLSQ9NRZ9 838 aa16.62■□□□□ 0.25
TUBB3-202ENST00000553656 ATP8A2Q9NTI2 1148 aa16.62■□□□□ 0.25
TUBB3-202ENST00000553656 SAP30BPQ9UHR5 308 aaKnown RBP16.62■□□□□ 0.25
TUBB3-202ENST00000553656 TLL2Q9Y6L7 1015 aa16.62■□□□□ 0.25
TUBB3-202ENST00000553656 ATRNL1Q5VV63 1379 aa16.62■□□□□ 0.25
TUBB3-202ENST00000553656 SSC5DA1L4H1 1573 aa16.61■□□□□ 0.25
TUBB3-202ENST00000553656 M0R2C6 588 aa16.61■□□□□ 0.25
TUBB3-202ENST00000553656 SAPCD2Q86UD0 394 aa16.61■□□□□ 0.25
TUBB3-202ENST00000553656 STRBPQ96SI9 672 aaKnown RBP16.61■□□□□ 0.25
TUBB3-202ENST00000553656 ZNF341Q9BYN7 854 aa16.61■□□□□ 0.25
TUBB3-202ENST00000553656 PI4KBQ9UBF8 816 aa16.61■□□□□ 0.25
TUBB3-202ENST00000553656 FOCADQ5VW36 1801 aa16.61■□□□□ 0.25
TUBB3-202ENST00000553656 DDTLA6NHG4 134 aaPredicted RBP16.6■□□□□ 0.25
TUBB3-202ENST00000553656 APPP05067 770 aa16.6■□□□□ 0.25
TUBB3-202ENST00000553656 POLR3DP05423 398 aaPredicted RBP16.6■□□□□ 0.25
TUBB3-202ENST00000553656 MFAP1P55081 439 aaKnown RBP16.6■□□□□ 0.25
TUBB3-202ENST00000553656 NMIQ13287 307 aaPredicted RBP16.6■□□□□ 0.25
TUBB3-202ENST00000553656 MCMDC2Q4G0Z9 681 aa16.6■□□□□ 0.25
TUBB3-202ENST00000553656 MIGA2Q7L4E1 593 aa16.6■□□□□ 0.25
TUBB3-202ENST00000553656 SH3BP5LQ7L8J4 393 aa16.6■□□□□ 0.25
TUBB3-202ENST00000553656 TTC6Q86TZ1 520 aa16.6■□□□□ 0.25
TUBB3-202ENST00000553656 CRACR2BQ8N4Y2 399 aaPredicted RBP16.6■□□□□ 0.25
TUBB3-202ENST00000553656 FAM227BQ96M60 508 aa16.6■□□□□ 0.25
TUBB3-202ENST00000553656 SEC62Q99442 399 aaKnown RBP16.6■□□□□ 0.25
TUBB3-202ENST00000553656 NACAP1Q9BZK3 213 aa16.6■□□□□ 0.25
TUBB3-202ENST00000553656 MCM9Q9NXL9 1143 aa16.6■□□□□ 0.25
TUBB3-202ENST00000553656 PALD1Q9ULE6 856 aa16.6■□□□□ 0.25
TUBB3-202ENST00000553656 CDK5RAP2Q96SN8 1893 aa16.6■□□□□ 0.25
TUBB3-202ENST00000553656 NAV1Q8NEY1 1877 aa16.59■□□□□ 0.25
TUBB3-202ENST00000553656 A0A0D9SFI3 127 aa16.59■□□□□ 0.25
TUBB3-202ENST00000553656 UBE2Q2LH0YL09 131 aa16.59■□□□□ 0.25
TUBB3-202ENST00000553656 PRKAB2O43741 272 aa16.59■□□□□ 0.25
TUBB3-202ENST00000553656 HTRA3P83110 453 aa16.59■□□□□ 0.25
TUBB3-202ENST00000553656 BMP2KLQ5H9B9 411 aa16.59■□□□□ 0.25
TUBB3-202ENST00000553656 CWC27Q6UX04 472 aaKnown RBP16.59■□□□□ 0.25
TUBB3-202ENST00000553656 MOB2Q70IA6 237 aa16.59■□□□□ 0.25
TUBB3-202ENST00000553656 DCP1AQ9NPI6 582 aaPredicted RBP16.59■□□□□ 0.25
TUBB3-202ENST00000553656 TDO2P48775 406 aa16.58■□□□□ 0.24
TUBB3-202ENST00000553656 MAP3K11Q16584 847 aa16.58■□□□□ 0.24
TUBB3-202ENST00000553656 SLC4A8Q2Y0W8 1093 aa16.58■□□□□ 0.24
TUBB3-202ENST00000553656 DEFB115Q30KQ5 88 aa16.58■□□□□ 0.24
TUBB3-202ENST00000553656 ANKRD13AQ8IZ07 590 aa16.58■□□□□ 0.24
TUBB3-202ENST00000553656 RUFY2Q8WXA3 655 aa16.58■□□□□ 0.24
TUBB3-202ENST00000553656 HHIPL1Q96JK4 782 aa16.58■□□□□ 0.24
TUBB3-202ENST00000553656 WRNIP1Q96S55 665 aa16.58■□□□□ 0.24
TUBB3-202ENST00000553656 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.58■□□□□ 0.24
TUBB3-202ENST00000553656 HERC5Q9UII4 1024 aaKnown RBP16.58■□□□□ 0.24
TUBB3-202ENST00000553656 FZD1Q9UP38 647 aa16.58■□□□□ 0.24
TUBB3-202ENST00000553656 CSADQ9Y600 493 aa16.58■□□□□ 0.24
TUBB3-202ENST00000553656 CCDC171Q6TFL3 1326 aa16.57■□□□□ 0.24
TUBB3-202ENST00000553656 UNCXA6NJT0 531 aa16.57■□□□□ 0.24
TUBB3-202ENST00000553656 RASSF10A6NK89 507 aa16.57■□□□□ 0.24
TUBB3-202ENST00000553656 PATL2C9JE40 543 aaKnown RBP16.57■□□□□ 0.24
TUBB3-202ENST00000553656 USP2O75604 605 aaPredicted RBP16.57■□□□□ 0.24
TUBB3-202ENST00000553656 ECE1P42892 770 aa16.57■□□□□ 0.24
TUBB3-202ENST00000553656 RGMBQ6NW40 437 aa16.57■□□□□ 0.24
TUBB3-202ENST00000553656 GIMAP6Q6P9H5 292 aa16.57■□□□□ 0.24
TUBB3-202ENST00000553656 CCDC129Q6ZRS4 1044 aa16.57■□□□□ 0.24
TUBB3-202ENST00000553656 FOXP4Q8IVH2 680 aaPredicted RBP16.57■□□□□ 0.24
TUBB3-202ENST00000553656 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.57■□□□□ 0.24
TUBB3-202ENST00000553656 ARPP21Q9UBL0 812 aaPredicted RBP16.57■□□□□ 0.24
TUBB3-202ENST00000553656 MKRN1Q9UHC7 482 aaKnown RBP16.57■□□□□ 0.24
TUBB3-202ENST00000553656 MYH1P12882 1939 aa16.57■□□□□ 0.24
TUBB3-202ENST00000553656 TBC1D12O60347 775 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms