RNA–Protein interactions for RNA: ENST00000553265.5

PRKCH-204, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-204ENST00000553265 RBSNQ9H1K0 784 aa9.06□□□□□ -0.96
PRKCH-204ENST00000553265 FAM8A1Q9UBU6 413 aa9.06□□□□□ -0.96
PRKCH-204ENST00000553265 PRAG1Q86YV5 1406 aa9.05□□□□□ -0.96
PRKCH-204ENST00000553265 ELOA3CA0A087WX78 387 aaPredicted RBP9.05□□□□□ -0.96
PRKCH-204ENST00000553265 ELOA3DA6NLF2 546 aaPredicted RBP9.05□□□□□ -0.96
PRKCH-204ENST00000553265 ADARB2-AS1A8MUL3 147 aa9.05□□□□□ -0.96
PRKCH-204ENST00000553265 TCF3P15923 654 aa9.05□□□□□ -0.96
PRKCH-204ENST00000553265 GRIA4P48058 902 aa9.05□□□□□ -0.96
PRKCH-204ENST00000553265 SPRED3Q2MJR0 410 aa9.05□□□□□ -0.96
PRKCH-204ENST00000553265 ELOA3BQ3SY89 546 aa9.05□□□□□ -0.96
PRKCH-204ENST00000553265 PSAPL1Q6NUJ1 521 aa9.05□□□□□ -0.96
PRKCH-204ENST00000553265 ELMSAN1Q6PJG2 1045 aa9.05□□□□□ -0.96
PRKCH-204ENST00000553265 BRINP3Q76B58 766 aa9.05□□□□□ -0.96
PRKCH-204ENST00000553265 CCNJLQ8IV13 435 aa9.05□□□□□ -0.96
PRKCH-204ENST00000553265 MICALL1Q8N3F8 863 aa9.05□□□□□ -0.96
PRKCH-204ENST00000553265 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.05□□□□□ -0.96
PRKCH-204ENST00000553265 ELOA3Q8NG57 546 aa9.05□□□□□ -0.96
PRKCH-204ENST00000553265 NUDT8Q8WV74 236 aa9.05□□□□□ -0.96
PRKCH-204ENST00000553265 TRIM33Q9UPN9 1127 aa9.05□□□□□ -0.96
PRKCH-204ENST00000553265 NUP155O75694 1391 aa9.04□□□□□ -0.96
PRKCH-204ENST00000553265 METP08581 1390 aa9.04□□□□□ -0.96
PRKCH-204ENST00000553265 KIF1BO60333 1816 aa9.04□□□□□ -0.96
PRKCH-204ENST00000553265 PDE2AO00408 941 aaPredicted RBP9.04□□□□□ -0.96
PRKCH-204ENST00000553265 GIPC1O14908 333 aa9.04□□□□□ -0.96
PRKCH-204ENST00000553265 PCSK7Q16549 785 aa9.04□□□□□ -0.96
PRKCH-204ENST00000553265 C9orf131Q5VYM1 1079 aa9.04□□□□□ -0.96
PRKCH-204ENST00000553265 PRPF40BQ6NWY9 871 aaKnown RBP9.04□□□□□ -0.96
PRKCH-204ENST00000553265 ZNF775Q96BV0 537 aaPredicted RBP9.04□□□□□ -0.96
PRKCH-204ENST00000553265 C19orf44Q9H6X5 657 aa9.04□□□□□ -0.96
PRKCH-204ENST00000553265 IGSF5Q9NSI5 407 aa9.04□□□□□ -0.96
PRKCH-204ENST00000553265 GDF2Q9UK05 429 aaPredicted RBP9.04□□□□□ -0.96
PRKCH-204ENST00000553265 TRAK1Q9UPV9 953 aa9.04□□□□□ -0.96
PRKCH-204ENST00000553265 RGS12O14924 1447 aa9.04□□□□□ -0.96
PRKCH-204ENST00000553265 PTCH1Q13635 1447 aa9.04□□□□□ -0.96
PRKCH-204ENST00000553265 COL22A1Q8NFW1 1626 aaPredicted RBP9.03□□□□□ -0.96
PRKCH-204ENST00000553265 TMEM238LA0A1B0GVL6 79 aa9.03□□□□□ -0.96
PRKCH-204ENST00000553265 FBXO24O75426 580 aa9.03□□□□□ -0.96
PRKCH-204ENST00000553265 WFS1O76024 890 aa9.03□□□□□ -0.96
PRKCH-204ENST00000553265 EPXP11678 715 aa9.03□□□□□ -0.96
PRKCH-204ENST00000553265 DTHD1Q6ZMT9 781 aa9.03□□□□□ -0.96
PRKCH-204ENST00000553265 TMEM102Q8N9M5 508 aaPredicted RBP9.03□□□□□ -0.96
PRKCH-204ENST00000553265 C3orf58Q8NDZ4 430 aa9.03□□□□□ -0.96
PRKCH-204ENST00000553265 NXPE3Q969Y0 559 aa9.03□□□□□ -0.96
PRKCH-204ENST00000553265 POP1Q99575 1024 aaKnown RBP9.03□□□□□ -0.96
PRKCH-204ENST00000553265 LACRTQ9GZZ8 138 aa9.03□□□□□ -0.96
PRKCH-204ENST00000553265 AKAP2Q9Y2D5 859 aa9.03□□□□□ -0.96
PRKCH-204ENST00000553265 PPLO60437 1756 aa9.03□□□□□ -0.96
PRKCH-204ENST00000553265 PNPLA6Q8IY17 1366 aa9.02□□□□□ -0.97
PRKCH-204ENST00000553265 SMNDC1O75940 238 aaKnown RBP eCLIP9.02□□□□□ -0.97
PRKCH-204ENST00000553265 ALBP02768 609 aa9.02□□□□□ -0.97
PRKCH-204ENST00000553265 GSTT1P30711 240 aa9.02□□□□□ -0.97
PRKCH-204ENST00000553265 ITGAEP38570 1179 aa9.02□□□□□ -0.97
PRKCH-204ENST00000553265 GDF6Q6KF10 455 aaPredicted RBP9.02□□□□□ -0.97
PRKCH-204ENST00000553265 SRCIN1Q9C0H9 1055 aa9.02□□□□□ -0.97
PRKCH-204ENST00000553265 BHLHE41Q9C0J9 482 aaPredicted RBP9.02□□□□□ -0.97
PRKCH-204ENST00000553265 TTF2Q9UNY4 1162 aaKnown RBP9.02□□□□□ -0.97
PRKCH-204ENST00000553265 STARD13Q9Y3M8 1113 aa9.02□□□□□ -0.97
PRKCH-204ENST00000553265 ATF3P18847 181 aa9.01□□□□□ -0.97
PRKCH-204ENST00000553265 ALAS2P22557 587 aa9.01□□□□□ -0.97
PRKCH-204ENST00000553265 HDLBPQ00341 1268 aaKnown RBP9.01□□□□□ -0.97
PRKCH-204ENST00000553265 CDC42BPGQ6DT37 1551 aa9.01□□□□□ -0.97
PRKCH-204ENST00000553265 C8orf86Q6ZUL3 223 aa9.01□□□□□ -0.97
PRKCH-204ENST00000553265 GALNT6Q8NCL4 622 aa9.01□□□□□ -0.97
PRKCH-204ENST00000553265 EDARADDQ8WWZ3 215 aa9.01□□□□□ -0.97
PRKCH-204ENST00000553265 MUC3BQ9H195 1237 aa9.01□□□□□ -0.97
PRKCH-204ENST00000553265 JPH1Q9HDC5 661 aaPredicted RBP9.01□□□□□ -0.97
PRKCH-204ENST00000553265 IFT172Q9UG01 1749 aa9□□□□□ -0.97
PRKCH-204ENST00000553265 A0A096LPE4 126 aa9□□□□□ -0.97
PRKCH-204ENST00000553265 A0A1W2PPZ6 126 aa9□□□□□ -0.97
PRKCH-204ENST00000553265 SHISA8B8ZZ34 492 aa9□□□□□ -0.97
PRKCH-204ENST00000553265 SCAMP3O14828 347 aaKnown RBP9□□□□□ -0.97
PRKCH-204ENST00000553265 ZNF772Q68DY9 489 aaPredicted RBP9□□□□□ -0.97
PRKCH-204ENST00000553265 LYPD4Q6UWN0 246 aa9□□□□□ -0.97
PRKCH-204ENST00000553265 WHAMMQ8TF30 809 aa9□□□□□ -0.97
PRKCH-204ENST00000553265 PPP4R2Q9NY27 417 aa9□□□□□ -0.97
PRKCH-204ENST00000553265 C1orf167Q5SNV9 1468 aa9□□□□□ -0.97
PRKCH-204ENST00000553265 MARF1Q9Y4F3 1742 aaKnown RBP9□□□□□ -0.97
PRKCH-204ENST00000553265 NAIPQ13075 1403 aa8.99□□□□□ -0.97
PRKCH-204ENST00000553265 RRBP1Q9P2E9 1410 aaKnown RBP8.99□□□□□ -0.97
PRKCH-204ENST00000553265 RGS9O75916 674 aaPredicted RBP8.99□□□□□ -0.97
PRKCH-204ENST00000553265 FANCCQ00597 558 aa8.99□□□□□ -0.97
PRKCH-204ENST00000553265 MEX3CQ5U5Q3 659 aaKnown RBP8.99□□□□□ -0.97
PRKCH-204ENST00000553265 TPTE2Q6XPS3 522 aa8.99□□□□□ -0.97
PRKCH-204ENST00000553265 CHSY3Q70JA7 882 aa8.99□□□□□ -0.97
PRKCH-204ENST00000553265 SH2B1Q9NRF2 756 aaPredicted RBP8.99□□□□□ -0.97
PRKCH-204ENST00000553265 FRRS1LQ9P0K9 344 aa8.99□□□□□ -0.97
PRKCH-204ENST00000553265 AFF2P51816 1311 aa8.99□□□□□ -0.97
PRKCH-204ENST00000553265 ROBO2Q9HCK4 1378 aa8.99□□□□□ -0.97
PRKCH-204ENST00000553265 KNDC1Q76NI1 1749 aa8.98□□□□□ -0.97
PRKCH-204ENST00000553265 SLURP2P0DP57 97 aa8.98□□□□□ -0.97
PRKCH-204ENST00000553265 CDC25BP30305 580 aa8.98□□□□□ -0.97
PRKCH-204ENST00000553265 ZNF76P36508 570 aa8.98□□□□□ -0.97
PRKCH-204ENST00000553265 ZNF576Q9H609 170 aa8.98□□□□□ -0.97
PRKCH-204ENST00000553265 MYOM2P54296 1465 aa8.97□□□□□ -0.97
PRKCH-204ENST00000553265 M0R082 166 aa8.97□□□□□ -0.97
PRKCH-204ENST00000553265 OIP5O43482 229 aa8.97□□□□□ -0.97
PRKCH-204ENST00000553265 CELA2BP08218 269 aaPredicted RBP8.97□□□□□ -0.97
PRKCH-204ENST00000553265 HMGB1P09429 215 aaKnown RBP8.97□□□□□ -0.97
PRKCH-204ENST00000553265 BCRP11274 1271 aa8.97□□□□□ -0.97
PRKCH-204ENST00000553265 PTPRAP18433 802 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms