RNA–Protein interactions for RNA: ENST00000551641.5

RAB3IP-215, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RAB3IP, Length 2,840 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-215ENST00000551641 PTGS1P23219 599 aa9.44□□□□□ -0.9
RAB3IP-215ENST00000551641 CCT2P78371 535 aaKnown RBP9.44□□□□□ -0.9
RAB3IP-215ENST00000551641 APPBP2Q92624 585 aa9.44□□□□□ -0.9
RAB3IP-215ENST00000551641 ZNF512BQ96KM6 892 aaPredicted RBP9.44□□□□□ -0.9
RAB3IP-215ENST00000551641 ABCF2Q9UG63 623 aa9.44□□□□□ -0.9
RAB3IP-215ENST00000551641 MROH5Q6ZUA9 1318 aa9.44□□□□□ -0.9
RAB3IP-215ENST00000551641 FAM160A1Q05DH4 1040 aa9.44□□□□□ -0.9
RAB3IP-215ENST00000551641 IMMTQ16891 758 aaKnown RBP9.44□□□□□ -0.9
RAB3IP-215ENST00000551641 FTOQ9C0B1 505 aaKnown RBP eCLIP9.44□□□□□ -0.9
RAB3IP-215ENST00000551641 SPON1Q9HCB6 807 aa9.44□□□□□ -0.9
RAB3IP-215ENST00000551641 RTEL1Q9NZ71 1219 aa9.44□□□□□ -0.9
RAB3IP-215ENST00000551641 A0A1W2PQ27 194 aa9.43□□□□□ -0.9
RAB3IP-215ENST00000551641 A0A1W2PQ64 194 aa9.43□□□□□ -0.9
RAB3IP-215ENST00000551641 A0A1W2PQD8 194 aa9.43□□□□□ -0.9
RAB3IP-215ENST00000551641 FGAP02671 866 aa9.43□□□□□ -0.9
RAB3IP-215ENST00000551641 ZAP70P43403 619 aa9.43□□□□□ -0.9
RAB3IP-215ENST00000551641 STX1AQ16623 288 aa9.43□□□□□ -0.9
RAB3IP-215ENST00000551641 WASHC4Q2M389 1173 aa9.43□□□□□ -0.9
RAB3IP-215ENST00000551641 CRY2Q49AN0 593 aa9.43□□□□□ -0.9
RAB3IP-215ENST00000551641 CCDC102BQ68D86 513 aa9.43□□□□□ -0.9
RAB3IP-215ENST00000551641 DPP8Q6V1X1 898 aaPredicted RBP9.43□□□□□ -0.9
RAB3IP-215ENST00000551641 ZNF804BA4D1E1 1349 aa9.43□□□□□ -0.9
RAB3IP-215ENST00000551641 IDH1O75874 414 aaKnown RBP9.43□□□□□ -0.9
RAB3IP-215ENST00000551641 ALDH1B1P30837 517 aa9.43□□□□□ -0.9
RAB3IP-215ENST00000551641 CCDC186Q7Z3E2 898 aa9.43□□□□□ -0.9
RAB3IP-215ENST00000551641 LPIN2Q92539 896 aa9.43□□□□□ -0.9
RAB3IP-215ENST00000551641 MRFAP1L1Q96HT8 127 aa9.43□□□□□ -0.9
RAB3IP-215ENST00000551641 TRIM5Q9C035 493 aa9.43□□□□□ -0.9
RAB3IP-215ENST00000551641 HPS5Q9UPZ3 1129 aa9.43□□□□□ -0.9
RAB3IP-215ENST00000551641 ANTXR2P58335 489 aa9.42□□□□□ -0.9
RAB3IP-215ENST00000551641 ADALQ6DHV7 355 aa9.42□□□□□ -0.9
RAB3IP-215ENST00000551641 ZSCAN25Q6NSZ9 544 aa9.42□□□□□ -0.9
RAB3IP-215ENST00000551641 CCDC73Q6ZRK6 1079 aa9.42□□□□□ -0.9
RAB3IP-215ENST00000551641 C11orf57Q6ZUT1 292 aaPredicted RBP9.42□□□□□ -0.9
RAB3IP-215ENST00000551641 CHST3Q7LGC8 479 aa9.42□□□□□ -0.9
RAB3IP-215ENST00000551641 VGLL2Q8N8G2 317 aa9.42□□□□□ -0.9
RAB3IP-215ENST00000551641 FHDC1Q9C0D6 1143 aaPredicted RBP9.42□□□□□ -0.9
RAB3IP-215ENST00000551641 PUS7LQ9H0K6 701 aaKnown RBP9.42□□□□□ -0.9
RAB3IP-215ENST00000551641 POLLQ9UGP5 575 aa9.42□□□□□ -0.9
RAB3IP-215ENST00000551641 GGA1Q9UJY5 639 aa9.42□□□□□ -0.9
RAB3IP-215ENST00000551641 RGL2O15211 777 aa9.42□□□□□ -0.9
RAB3IP-215ENST00000551641 DHX16O60231 1041 aaKnown RBP9.42□□□□□ -0.9
RAB3IP-215ENST00000551641 BBOX1O75936 387 aa9.42□□□□□ -0.9
RAB3IP-215ENST00000551641 PTGER2P43116 358 aa9.42□□□□□ -0.9
RAB3IP-215ENST00000551641 CEBPZQ03701 1054 aaKnown RBP9.42□□□□□ -0.9
RAB3IP-215ENST00000551641 CAVIN4Q5BKX8 364 aa9.42□□□□□ -0.9
RAB3IP-215ENST00000551641 FMR1NBQ8N0W7 255 aaPredicted RBP9.42□□□□□ -0.9
RAB3IP-215ENST00000551641 TTLL6Q8N841 843 aa9.42□□□□□ -0.9
RAB3IP-215ENST00000551641 DBNDD1Q9H9R9 158 aa9.42□□□□□ -0.9
RAB3IP-215ENST00000551641 POLR3EQ9NVU0 708 aa9.42□□□□□ -0.9
RAB3IP-215ENST00000551641 LRP5O75197 1615 aa9.42□□□□□ -0.9
RAB3IP-215ENST00000551641 F8W031 263 aaPredicted RBP9.41□□□□□ -0.9
RAB3IP-215ENST00000551641 PRC1O43663 620 aa9.41□□□□□ -0.9
RAB3IP-215ENST00000551641 KINO60870 393 aaKnown RBP9.41□□□□□ -0.9
RAB3IP-215ENST00000551641 YEATS4O95619 227 aa9.41□□□□□ -0.9
RAB3IP-215ENST00000551641 MCAMP43121 646 aa9.41□□□□□ -0.9
RAB3IP-215ENST00000551641 LINC00301Q8NCQ3 95 aa9.41□□□□□ -0.9
RAB3IP-215ENST00000551641 FBXO18Q8NFZ0 1043 aa9.41□□□□□ -0.9
RAB3IP-215ENST00000551641 NCOA7Q8NI08 942 aa9.41□□□□□ -0.9
RAB3IP-215ENST00000551641 GPHNQ9NQX3 736 aaPredicted RBP9.41□□□□□ -0.9
RAB3IP-215ENST00000551641 ANO10Q9NW15 660 aa9.41□□□□□ -0.9
RAB3IP-215ENST00000551641 PCDHA7Q9UN72 937 aa9.41□□□□□ -0.9
RAB3IP-215ENST00000551641 NEDD4P46934 1319 aa9.41□□□□□ -0.9
RAB3IP-215ENST00000551641 GPAA1O43292 621 aa9.41□□□□□ -0.9
RAB3IP-215ENST00000551641 BRAPQ7Z569 592 aa9.41□□□□□ -0.9
RAB3IP-215ENST00000551641 DHX40Q8IX18 779 aaKnown RBP9.41□□□□□ -0.9
RAB3IP-215ENST00000551641 ZNF710Q8N1W2 664 aa9.41□□□□□ -0.9
RAB3IP-215ENST00000551641 FSIP1Q8NA03 581 aa9.41□□□□□ -0.9
RAB3IP-215ENST00000551641 MRPS27Q92552 414 aaKnown RBP9.41□□□□□ -0.9
RAB3IP-215ENST00000551641 CRAMP1Q96RY5 1269 aa9.41□□□□□ -0.9
RAB3IP-215ENST00000551641 NRBP1Q9UHY1 535 aa9.41□□□□□ -0.9
RAB3IP-215ENST00000551641 XDHP47989 1333 aa9.41□□□□□ -0.9
RAB3IP-215ENST00000551641 CACNA1SQ13698 1873 aa9.41□□□□□ -0.9
RAB3IP-215ENST00000551641 ADD2P35612 726 aa9.41□□□□□ -0.9
RAB3IP-215ENST00000551641 FOSBP53539 338 aa9.41□□□□□ -0.9
RAB3IP-215ENST00000551641 RASGRF1Q13972 1273 aa9.41□□□□□ -0.9
RAB3IP-215ENST00000551641 TBC1D16Q8TBP0 767 aa9.41□□□□□ -0.9
RAB3IP-215ENST00000551641 KCNG4Q8TDN1 519 aa9.41□□□□□ -0.9
RAB3IP-215ENST00000551641 CNKSR1Q969H4 720 aa9.41□□□□□ -0.9
RAB3IP-215ENST00000551641 MXD3Q9BW11 206 aa9.41□□□□□ -0.9
RAB3IP-215ENST00000551641 ANKRD2Q9GZV1 360 aa9.41□□□□□ -0.9
RAB3IP-215ENST00000551641 ZNF277Q9NRM2 450 aaPredicted RBP9.41□□□□□ -0.9
RAB3IP-215ENST00000551641 CLIP2Q9UDT6 1046 aa9.41□□□□□ -0.9
RAB3IP-215ENST00000551641 RGPD3A6NKT7 1758 aaPredicted RBP9.4□□□□□ -0.9
RAB3IP-215ENST00000551641 LAMB2P55268 1798 aa9.4□□□□□ -0.9
RAB3IP-215ENST00000551641 RGPD4Q7Z3J3 1758 aa9.4□□□□□ -0.9
RAB3IP-215ENST00000551641 MYH7P12883 1935 aa9.4□□□□□ -0.9
RAB3IP-215ENST00000551641 AKAP11Q9UKA4 1901 aa9.4□□□□□ -0.9
RAB3IP-215ENST00000551641 KLF18A0A0U1RQI7 1052 aa9.4□□□□□ -0.9
RAB3IP-215ENST00000551641 GOLGA6L19H0YKK7 550 aa9.4□□□□□ -0.9
RAB3IP-215ENST00000551641 HOXA10P31260 410 aaPredicted RBP9.4□□□□□ -0.9
RAB3IP-215ENST00000551641 HIBADHP31937 336 aaKnown RBP9.4□□□□□ -0.9
RAB3IP-215ENST00000551641 ME1P48163 572 aa9.4□□□□□ -0.9
RAB3IP-215ENST00000551641 HAND2P61296 217 aa9.4□□□□□ -0.9
RAB3IP-215ENST00000551641 GUCY1B3Q02153 619 aa9.4□□□□□ -0.9
RAB3IP-215ENST00000551641 LRMPQ12912 555 aa9.4□□□□□ -0.9
RAB3IP-215ENST00000551641 AOC3Q16853 763 aa9.4□□□□□ -0.9
RAB3IP-215ENST00000551641 CCDC144BQ3MJ40 725 aa9.4□□□□□ -0.9
RAB3IP-215ENST00000551641 CCDC144CPQ8IYA2 1237 aa9.4□□□□□ -0.9
RAB3IP-215ENST00000551641 C8orf76Q96K31 380 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms