RNA–Protein interactions for RNA: ENST00000551293.1

RPAP3-207, Transcript of RNA polymerase II associated protein 3, humanhuman

TSL 1 (best)

Gene RPAP3, Length 621 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP3-207ENST00000551293 ZSCAN29Q8IWY8 852 aaPredicted RBP23.22■■□□□ 1.31
RPAP3-207ENST00000551293 SCYL3Q8IZE3 742 aa23.22■■□□□ 1.31
RPAP3-207ENST00000551293 SLC17A8Q8NDX2 589 aa23.22■■□□□ 1.31
RPAP3-207ENST00000551293 A0A0G2JLL6 359 aaPredicted RBP23.21■■□□□ 1.31
RPAP3-207ENST00000551293 TNPO2O14787 897 aaKnown RBP23.21■■□□□ 1.31
RPAP3-207ENST00000551293 EVI5O60447 810 aa23.21■■□□□ 1.31
RPAP3-207ENST00000551293 PTPRAP18433 802 aa23.21■■□□□ 1.31
RPAP3-207ENST00000551293 SH3BP5LQ7L8J4 393 aa23.21■■□□□ 1.31
RPAP3-207ENST00000551293 PRRT2Q7Z6L0 340 aaPredicted RBP23.21■■□□□ 1.31
RPAP3-207ENST00000551293 LRCH3Q96II8 777 aa23.21■■□□□ 1.31
RPAP3-207ENST00000551293 STAP2Q9UGK3 403 aa23.21■■□□□ 1.31
RPAP3-207ENST00000551293 TRIM75PA6NK02 468 aa23.2■■□□□ 1.3
RPAP3-207ENST00000551293 DLL1O00548 723 aa23.2■■□□□ 1.3
RPAP3-207ENST00000551293 ATP2B3Q16720 1220 aa23.2■■□□□ 1.3
RPAP3-207ENST00000551293 FASTKD5Q7L8L6 764 aaKnown RBP23.2■■□□□ 1.3
RPAP3-207ENST00000551293 SMCR8Q8TEV9 937 aaPredicted RBP23.2■■□□□ 1.3
RPAP3-207ENST00000551293 AFG3L2Q9Y4W6 797 aa23.2■■□□□ 1.3
RPAP3-207ENST00000551293 ATRNL1Q5VV63 1379 aa23.19■■□□□ 1.3
RPAP3-207ENST00000551293 PHKA1P46020 1223 aa23.19■■□□□ 1.3
RPAP3-207ENST00000551293 PICALMQ13492 652 aa23.19■■□□□ 1.3
RPAP3-207ENST00000551293 LRRFIP2Q9Y608 721 aaKnown RBP23.19■■□□□ 1.3
RPAP3-207ENST00000551293 MYH13Q9UKX3 1938 aa23.19■■□□□ 1.3
RPAP3-207ENST00000551293 MGAMO43451 1857 aa23.18■■□□□ 1.3
RPAP3-207ENST00000551293 ANKRD13CQ8N6S4 541 aa23.18■■□□□ 1.3
RPAP3-207ENST00000551293 GNL3LQ9NVN8 582 aaKnown RBP23.18■■□□□ 1.3
RPAP3-207ENST00000551293 DDTLA6NHG4 134 aaPredicted RBP23.17■■□□□ 1.3
RPAP3-207ENST00000551293 ANP32CO43423 234 aa23.17■■□□□ 1.3
RPAP3-207ENST00000551293 ADORA1P30542 326 aa23.17■■□□□ 1.3
RPAP3-207ENST00000551293 DIS3LQ8TF46 1054 aaKnown RBP23.17■■□□□ 1.3
RPAP3-207ENST00000551293 SSH1Q8WYL5 1049 aa23.17■■□□□ 1.3
RPAP3-207ENST00000551293 PAWRQ96IZ0 340 aaKnown RBP23.17■■□□□ 1.3
RPAP3-207ENST00000551293 PTPRCP08575 1304 aa23.16■■□□□ 1.3
RPAP3-207ENST00000551293 FAM196BA6NMK8 535 aa23.16■■□□□ 1.3
RPAP3-207ENST00000551293 DDX4Q9NQI0 724 aaKnown RBP23.16■■□□□ 1.3
RPAP3-207ENST00000551293 CEP126Q9P2H0 1117 aa23.16■■□□□ 1.3
RPAP3-207ENST00000551293 LAMA3Q16787 3333 aa23.15■■□□□ 1.3
RPAP3-207ENST00000551293 TREML2Q5T2D2 321 aa23.15■■□□□ 1.3
RPAP3-207ENST00000551293 ABCF2Q9UG63 623 aa23.15■■□□□ 1.3
RPAP3-207ENST00000551293 DENND2AQ9ULE3 1009 aa23.15■■□□□ 1.3
RPAP3-207ENST00000551293 PA2G4Q9UQ80 394 aaKnown RBP23.15■■□□□ 1.3
RPAP3-207ENST00000551293 ENTPD3O75355 529 aa23.14■■□□□ 1.29
RPAP3-207ENST00000551293 DZIP1Q86YF9 867 aaKnown RBP23.14■■□□□ 1.29
RPAP3-207ENST00000551293 PXYLP1Q8TE99 480 aa23.14■■□□□ 1.29
RPAP3-207ENST00000551293 IDI2Q9BXS1 227 aa23.14■■□□□ 1.29
RPAP3-207ENST00000551293 DOCK2Q92608 1830 aa23.14■■□□□ 1.29
RPAP3-207ENST00000551293 SALL1Q9NSC2 1324 aa23.13■■□□□ 1.29
RPAP3-207ENST00000551293 COL6A3P12111 3177 aa23.13■■□□□ 1.29
RPAP3-207ENST00000551293 C7orf61Q8IZ16 206 aa23.13■■□□□ 1.29
RPAP3-207ENST00000551293 PAK6Q9NQU5 681 aaPredicted RBP23.13■■□□□ 1.29
RPAP3-207ENST00000551293 ZMYND8Q9ULU4 1186 aaPredicted RBP23.13■■□□□ 1.29
RPAP3-207ENST00000551293 BTDP43251 543 aa23.12■■□□□ 1.29
RPAP3-207ENST00000551293 IRF5Q13568 498 aa23.12■■□□□ 1.29
RPAP3-207ENST00000551293 CCDC102BQ68D86 513 aa23.12■■□□□ 1.29
RPAP3-207ENST00000551293 COA7Q96BR5 231 aa23.12■■□□□ 1.29
RPAP3-207ENST00000551293 GAKO14976 1311 aa23.11■■□□□ 1.29
RPAP3-207ENST00000551293 CTNND1O60716 968 aaKnown RBP23.11■■□□□ 1.29
RPAP3-207ENST00000551293 TRIM32Q13049 653 aa23.11■■□□□ 1.29
RPAP3-207ENST00000551293 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.11■■□□□ 1.29
RPAP3-207ENST00000551293 AGTPBP1Q9UPW5 1226 aa23.11■■□□□ 1.29
RPAP3-207ENST00000551293 SLC45A1Q9Y2W3 748 aa23.11■■□□□ 1.29
RPAP3-207ENST00000551293 RFX7Q2KHR2 1363 aa23.11■■□□□ 1.29
RPAP3-207ENST00000551293 UBTFL1P0CB47 393 aaPredicted RBP23.1■■□□□ 1.29
RPAP3-207ENST00000551293 RASGRF1Q13972 1273 aa23.1■■□□□ 1.29
RPAP3-207ENST00000551293 NECAB2Q7Z6G3 386 aa23.1■■□□□ 1.29
RPAP3-207ENST00000551293 CRISPLD2Q9H0B8 497 aa23.1■■□□□ 1.29
RPAP3-207ENST00000551293 ZNF521Q96K83 1311 aa23.09■■□□□ 1.29
RPAP3-207ENST00000551293 SEMA3EO15041 775 aa23.09■■□□□ 1.29
RPAP3-207ENST00000551293 CIAO1O76071 339 aa23.09■■□□□ 1.29
RPAP3-207ENST00000551293 SYN1P17600 705 aa23.09■■□□□ 1.29
RPAP3-207ENST00000551293 TIMM10P62072 90 aa23.09■■□□□ 1.29
RPAP3-207ENST00000551293 MAP3K10Q02779 954 aa23.09■■□□□ 1.29
RPAP3-207ENST00000551293 A0A0C4DFX4 3053 aa23.09■■□□□ 1.29
RPAP3-207ENST00000551293 MYH2Q9UKX2 1941 aa23.08■■□□□ 1.29
RPAP3-207ENST00000551293 A0A1W2PPC1 479 aa23.08■■□□□ 1.29
RPAP3-207ENST00000551293 SPP2Q13103 211 aa23.08■■□□□ 1.29
RPAP3-207ENST00000551293 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.08■■□□□ 1.29
RPAP3-207ENST00000551293 DOCK1Q14185 1865 aa23.07■■□□□ 1.28
RPAP3-207ENST00000551293 IL15P40933 162 aaPredicted RBP23.07■■□□□ 1.28
RPAP3-207ENST00000551293 HMGCS2P54868 508 aa23.07■■□□□ 1.28
RPAP3-207ENST00000551293 Q7L0L9 218 aa23.07■■□□□ 1.28
RPAP3-207ENST00000551293 ZGPATQ8N5A5 531 aaKnown RBP23.07■■□□□ 1.28
RPAP3-207ENST00000551293 MROH7-TTC4A0A0A0MT08 1334 aa23.07■■□□□ 1.28
RPAP3-207ENST00000551293 PHIPQ8WWQ0 1821 aa23.06■■□□□ 1.28
RPAP3-207ENST00000551293 PEX10O60683 326 aa23.06■■□□□ 1.28
RPAP3-207ENST00000551293 MECOMQ03112 1051 aa23.06■■□□□ 1.28
RPAP3-207ENST00000551293 FAM110CQ1W6H9 321 aa23.06■■□□□ 1.28
RPAP3-207ENST00000551293 SMC4Q9NTJ3 1288 aa23.06■■□□□ 1.28
RPAP3-207ENST00000551293 PNMA3Q9UL41 463 aa23.06■■□□□ 1.28
RPAP3-207ENST00000551293 PTPRFP10586 1907 aa23.06■■□□□ 1.28
RPAP3-207ENST00000551293 ALPK3Q96L96 1907 aa23.06■■□□□ 1.28
RPAP3-207ENST00000551293 RRP1BQ14684 758 aaKnown RBP23.05■■□□□ 1.28
RPAP3-207ENST00000551293 GDF15Q99988 308 aa23.05■■□□□ 1.28
RPAP3-207ENST00000551293 HMGCRP04035 888 aa23.04■■□□□ 1.28
RPAP3-207ENST00000551293 RHBDL3P58872 404 aa23.04■■□□□ 1.28
RPAP3-207ENST00000551293 SLF2Q8IX21 1173 aa23.04■■□□□ 1.28
RPAP3-207ENST00000551293 ZNF384Q8TF68 577 aa23.04■■□□□ 1.28
RPAP3-207ENST00000551293 FBXO3Q9UK99 471 aa23.04■■□□□ 1.28
RPAP3-207ENST00000551293 SPTY2D1Q68D10 685 aaPredicted RBP23.03■■□□□ 1.28
RPAP3-207ENST00000551293 PI16Q6UXB8 463 aa23.03■■□□□ 1.28
RPAP3-207ENST00000551293 TBC1D9Q6ZT07 1266 aa23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms