RNA–Protein interactions for RNA: ENST00000550620.1

PDE1B-207, Transcript of phosphodiesterase 1B, humanhuman

TSL 1 (best) BASIC

Gene PDE1B, Length 2,150 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1B-207ENST00000550620 HSP90AB3PQ58FF7 597 aa17.21■□□□□ 0.35
PDE1B-207ENST00000550620 TAF7LQ5H9L4 462 aa17.21■□□□□ 0.35
PDE1B-207ENST00000550620 NUTM2AQ8IVF1 878 aaPredicted RBP17.21■□□□□ 0.35
PDE1B-207ENST00000550620 FOXP4Q8IVH2 680 aaPredicted RBP17.21■□□□□ 0.35
PDE1B-207ENST00000550620 PHKBQ93100 1093 aa17.21■□□□□ 0.35
PDE1B-207ENST00000550620 KIFC2Q96AC6 838 aa17.21■□□□□ 0.35
PDE1B-207ENST00000550620 WDR24Q96S15 920 aa17.21■□□□□ 0.35
PDE1B-207ENST00000550620 MAN1B1Q9UKM7 699 aa17.21■□□□□ 0.35
PDE1B-207ENST00000550620 NFE2L3Q9Y4A8 694 aa17.21■□□□□ 0.35
PDE1B-207ENST00000550620 RGPD5Q99666 1765 aa17.21■□□□□ 0.35
PDE1B-207ENST00000550620 GOLGA8AA7E2F4 631 aa17.21■□□□□ 0.34
PDE1B-207ENST00000550620 SASH3O75995 380 aa17.21■□□□□ 0.34
PDE1B-207ENST00000550620 ZNF18P17022 549 aa17.21■□□□□ 0.34
PDE1B-207ENST00000550620 MDM2Q00987 491 aaPredicted RBP17.21■□□□□ 0.34
PDE1B-207ENST00000550620 NT5DC1Q5TFE4 455 aa17.21■□□□□ 0.34
PDE1B-207ENST00000550620 NFXL1Q6ZNB6 911 aa17.21■□□□□ 0.34
PDE1B-207ENST00000550620 TOGARAM2Q6ZUX3 1019 aa17.21■□□□□ 0.34
PDE1B-207ENST00000550620 MICU3Q86XE3 530 aa17.21■□□□□ 0.34
PDE1B-207ENST00000550620 SMARCE1Q969G3 411 aa17.21■□□□□ 0.34
PDE1B-207ENST00000550620 ZBTB3Q9H5J0 574 aa17.21■□□□□ 0.34
PDE1B-207ENST00000550620 CDC27P30260 824 aa17.2■□□□□ 0.34
PDE1B-207ENST00000550620 SLC20A2Q08357 652 aa17.2■□□□□ 0.34
PDE1B-207ENST00000550620 SCARF1Q14162 830 aa17.2■□□□□ 0.34
PDE1B-207ENST00000550620 TTF1Q15361 905 aaPredicted RBP17.2■□□□□ 0.34
PDE1B-207ENST00000550620 SAFBQ15424 915 aaKnown RBP eCLIP17.2■□□□□ 0.34
PDE1B-207ENST00000550620 MUM1L1Q5H9M0 696 aa17.2■□□□□ 0.34
PDE1B-207ENST00000550620 KANK3Q6NY19 840 aa17.2■□□□□ 0.34
PDE1B-207ENST00000550620 CYB5R4Q7L1T6 521 aa17.2■□□□□ 0.34
PDE1B-207ENST00000550620 AK7Q96M32 723 aa17.2■□□□□ 0.34
PDE1B-207ENST00000550620 PARD6BQ9BYG5 372 aa17.2■□□□□ 0.34
PDE1B-207ENST00000550620 RAI14Q9P0K7 980 aa17.2■□□□□ 0.34
PDE1B-207ENST00000550620 CCDC151A5D8V7 595 aa17.19■□□□□ 0.34
PDE1B-207ENST00000550620 CCDC175P0C221 793 aa17.19■□□□□ 0.34
PDE1B-207ENST00000550620 BMP6P22004 513 aa17.19■□□□□ 0.34
PDE1B-207ENST00000550620 ADD2P35612 726 aa17.19■□□□□ 0.34
PDE1B-207ENST00000550620 TXLNAP40222 546 aa17.19■□□□□ 0.34
PDE1B-207ENST00000550620 SSRP1Q08945 709 aaKnown RBP17.19■□□□□ 0.34
PDE1B-207ENST00000550620 BRD3Q15059 726 aa17.19■□□□□ 0.34
PDE1B-207ENST00000550620 TBC1D10CQ8IV04 446 aa17.19■□□□□ 0.34
PDE1B-207ENST00000550620 NOSTRINQ8IVI9 506 aa17.19■□□□□ 0.34
PDE1B-207ENST00000550620 ATRNO75882 1429 aa17.19■□□□□ 0.34
PDE1B-207ENST00000550620 NUP188Q5SRE5 1749 aa17.19■□□□□ 0.34
PDE1B-207ENST00000550620 POTEB2H3BUK9 544 aa17.19■□□□□ 0.34
PDE1B-207ENST00000550620 RXRAP19793 462 aa17.19■□□□□ 0.34
PDE1B-207ENST00000550620 ADKP55263 362 aaKnown RBP17.19■□□□□ 0.34
PDE1B-207ENST00000550620 TUBB4BP68371 445 aa17.19■□□□□ 0.34
PDE1B-207ENST00000550620 NTRK3Q16288 839 aa17.19■□□□□ 0.34
PDE1B-207ENST00000550620 SGMS1Q86VZ5 419 aa17.19■□□□□ 0.34
PDE1B-207ENST00000550620 CCDC12Q8WUD4 166 aaPredicted RBP17.19■□□□□ 0.34
PDE1B-207ENST00000550620 BBXQ8WY36 941 aaPredicted RBP17.19■□□□□ 0.34
PDE1B-207ENST00000550620 NAA15Q9BXJ9 866 aaKnown RBP17.19■□□□□ 0.34
PDE1B-207ENST00000550620 NBPF3Q9H094 633 aa17.19■□□□□ 0.34
PDE1B-207ENST00000550620 UBN2Q6ZU65 1347 aa17.18■□□□□ 0.34
PDE1B-207ENST00000550620 APPP05067 770 aa17.18■□□□□ 0.34
PDE1B-207ENST00000550620 MORC3Q14149 939 aa17.18■□□□□ 0.34
PDE1B-207ENST00000550620 PTPN21Q16825 1174 aa17.18■□□□□ 0.34
PDE1B-207ENST00000550620 DHX58Q96C10 678 aa17.18■□□□□ 0.34
PDE1B-207ENST00000550620 CCDC34Q96HJ3 373 aa17.18■□□□□ 0.34
PDE1B-207ENST00000550620 PANX2Q96RD6 677 aa17.18■□□□□ 0.34
PDE1B-207ENST00000550620 AKR1B15C9JRZ8 316 aaPredicted RBP17.18■□□□□ 0.34
PDE1B-207ENST00000550620 SARSP49591 514 aaKnown RBP17.18■□□□□ 0.34
PDE1B-207ENST00000550620 TUBB2AQ13885 445 aa17.18■□□□□ 0.34
PDE1B-207ENST00000550620 CT47A1Q5JQC4 288 aaPredicted RBP17.18■□□□□ 0.34
PDE1B-207ENST00000550620 TUBB2BQ9BVA1 445 aa17.18■□□□□ 0.34
PDE1B-207ENST00000550620 EPC1Q9H2F5 836 aa17.18■□□□□ 0.34
PDE1B-207ENST00000550620 TAOK2Q9UL54 1235 aa17.18■□□□□ 0.34
PDE1B-207ENST00000550620 PKD1L3Q7Z443 1732 aa17.18■□□□□ 0.34
PDE1B-207ENST00000550620 B4E1Z4 1266 aa17.17■□□□□ 0.34
PDE1B-207ENST00000550620 RANBP6O60518 1105 aaKnown RBP17.17■□□□□ 0.34
PDE1B-207ENST00000550620 FMNL1O95466 1100 aaPredicted RBP17.17■□□□□ 0.34
PDE1B-207ENST00000550620 PTPREP23469 700 aa17.17■□□□□ 0.34
PDE1B-207ENST00000550620 ERCC5P28715 1186 aaPredicted RBP17.17■□□□□ 0.34
PDE1B-207ENST00000550620 UBE3CQ15386 1083 aa17.17■□□□□ 0.34
PDE1B-207ENST00000550620 RILPL1Q5EBL4 403 aa17.17■□□□□ 0.34
PDE1B-207ENST00000550620 TMEM67Q5HYA8 995 aa17.17■□□□□ 0.34
PDE1B-207ENST00000550620 SLC9C2Q5TAH2 1124 aa17.17■□□□□ 0.34
PDE1B-207ENST00000550620 CEP112Q8N8E3 955 aa17.17■□□□□ 0.34
PDE1B-207ENST00000550620 ZNF579Q8NAF0 562 aaKnown RBP17.17■□□□□ 0.34
PDE1B-207ENST00000550620 NEK11Q8NG66 645 aa17.17■□□□□ 0.34
PDE1B-207ENST00000550620 ZNF512BQ96KM6 892 aaPredicted RBP17.17■□□□□ 0.34
PDE1B-207ENST00000550620 ISCA1Q9BUE6 129 aa17.17■□□□□ 0.34
PDE1B-207ENST00000550620 SLC26A6Q9BXS9 759 aa17.17■□□□□ 0.34
PDE1B-207ENST00000550620 FUT8Q9BYC5 575 aa17.17■□□□□ 0.34
PDE1B-207ENST00000550620 FOXN1O15353 648 aa17.16■□□□□ 0.34
PDE1B-207ENST00000550620 A1BGP04217 495 aa17.16■□□□□ 0.34
PDE1B-207ENST00000550620 LIFRP42702 1097 aa17.16■□□□□ 0.34
PDE1B-207ENST00000550620 FMR1Q06787 632 aaKnown RBP eCLIP17.16■□□□□ 0.34
PDE1B-207ENST00000550620 IFIT5Q13325 482 aaKnown RBP17.16■□□□□ 0.34
PDE1B-207ENST00000550620 NR1I3Q14994 352 aa17.16■□□□□ 0.34
PDE1B-207ENST00000550620 HSP90AA4PQ58FG1 418 aa17.16■□□□□ 0.34
PDE1B-207ENST00000550620 STK11IPQ8N1F8 1099 aa17.16■□□□□ 0.34
PDE1B-207ENST00000550620 IGDCC4Q8TDY8 1250 aa17.16■□□□□ 0.34
PDE1B-207ENST00000550620 LY9Q9HBG7 655 aa17.16■□□□□ 0.34
PDE1B-207ENST00000550620 PSD3Q9NYI0 1048 aa17.16■□□□□ 0.34
PDE1B-207ENST00000550620 CWC15Q9P013 229 aaKnown RBP17.16■□□□□ 0.34
PDE1B-207ENST00000550620 CEP131Q9UPN4 1083 aa17.16■□□□□ 0.34
PDE1B-207ENST00000550620 SLC12A7Q9Y666 1083 aa17.16■□□□□ 0.34
PDE1B-207ENST00000550620 ZBTB22O15209 634 aa17.16■□□□□ 0.34
PDE1B-207ENST00000550620 POLR2DO15514 142 aaKnown RBP17.16■□□□□ 0.34
PDE1B-207ENST00000550620 MMP1P03956 469 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms