RNA–Protein interactions for RNA: ENST00000550436.4

SVOP-203, Transcript of SV2 related protein, humanhuman

TSL 4

Gene SVOP, Length 695 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVOP-203ENST00000550436 ATP2B3Q16720 1220 aa18.78■□□□□ 0.6
SVOP-203ENST00000550436 GADL1Q6ZQY3 521 aa18.78■□□□□ 0.6
SVOP-203ENST00000550436 U2AF1L4Q8WU68 220 aaKnown RBP18.78■□□□□ 0.6
SVOP-203ENST00000550436 PARK7Q99497 189 aaKnown RBP18.78■□□□□ 0.6
SVOP-203ENST00000550436 PRO3102Q9H379 93 aa18.78■□□□□ 0.6
SVOP-203ENST00000550436 PHIPQ8WWQ0 1821 aa18.78■□□□□ 0.6
SVOP-203ENST00000550436 PTPRCP08575 1304 aa18.77■□□□□ 0.6
SVOP-203ENST00000550436 PA2G4Q9UQ80 394 aaKnown RBP18.77■□□□□ 0.6
SVOP-203ENST00000550436 A0A0G2JLL6 359 aaPredicted RBP18.76■□□□□ 0.59
SVOP-203ENST00000550436 DDTLA6NHG4 134 aaPredicted RBP18.76■□□□□ 0.59
SVOP-203ENST00000550436 ADCY3O60266 1144 aa18.76■□□□□ 0.59
SVOP-203ENST00000550436 FARP2O94887 1054 aaPredicted RBP18.76■□□□□ 0.59
SVOP-203ENST00000550436 PTPRAP18433 802 aa18.76■□□□□ 0.59
SVOP-203ENST00000550436 FLT3LGP49771 235 aa18.76■□□□□ 0.59
SVOP-203ENST00000550436 PRRT2Q7Z6L0 340 aaPredicted RBP18.76■□□□□ 0.59
SVOP-203ENST00000550436 TRMT2AQ8IZ69 625 aaKnown RBP18.76■□□□□ 0.59
SVOP-203ENST00000550436 SCYL3Q8IZE3 742 aa18.76■□□□□ 0.59
SVOP-203ENST00000550436 NKX2-3Q8TAU0 364 aa18.76■□□□□ 0.59
SVOP-203ENST00000550436 DDX4Q9NQI0 724 aaKnown RBP18.76■□□□□ 0.59
SVOP-203ENST00000550436 AFG3L2Q9Y4W6 797 aa18.76■□□□□ 0.59
SVOP-203ENST00000550436 ALPK3Q96L96 1907 aa18.76■□□□□ 0.59
SVOP-203ENST00000550436 ZBTB7BO15156 539 aaPredicted RBP18.75■□□□□ 0.59
SVOP-203ENST00000550436 UBXN2AP68543 259 aa18.75■□□□□ 0.59
SVOP-203ENST00000550436 CEP126Q9P2H0 1117 aa18.75■□□□□ 0.59
SVOP-203ENST00000550436 DOCK1Q14185 1865 aa18.74■□□□□ 0.59
SVOP-203ENST00000550436 RFX7Q2KHR2 1363 aa18.74■□□□□ 0.59
SVOP-203ENST00000550436 SGPL1O95470 568 aa18.74■□□□□ 0.59
SVOP-203ENST00000550436 INHAP05111 366 aa18.74■□□□□ 0.59
SVOP-203ENST00000550436 ZSCAN29Q8IWY8 852 aaPredicted RBP18.74■□□□□ 0.59
SVOP-203ENST00000550436 SLAIN1Q8ND83 568 aa18.74■□□□□ 0.59
SVOP-203ENST00000550436 HTATIP2Q9BUP3 242 aa18.74■□□□□ 0.59
SVOP-203ENST00000550436 PICK1Q9NRD5 415 aa18.74■□□□□ 0.59
SVOP-203ENST00000550436 SALL1Q9NSC2 1324 aa18.74■□□□□ 0.59
SVOP-203ENST00000550436 TRIM75PA6NK02 468 aa18.73■□□□□ 0.59
SVOP-203ENST00000550436 FAM196BA6NMK8 535 aa18.73■□□□□ 0.59
SVOP-203ENST00000550436 SOX1O00570 391 aaPredicted RBP18.73■□□□□ 0.59
SVOP-203ENST00000550436 HNRNPUQ00839 825 aaKnown RBP eCLIP18.73■□□□□ 0.59
SVOP-203ENST00000550436 PICALMQ13492 652 aa18.73■□□□□ 0.59
SVOP-203ENST00000550436 DEFB118Q96PH6 123 aa18.73■□□□□ 0.59
SVOP-203ENST00000550436 IDI2Q9BXS1 227 aa18.73■□□□□ 0.59
SVOP-203ENST00000550436 GNL3LQ9NVN8 582 aaKnown RBP18.73■□□□□ 0.59
SVOP-203ENST00000550436 TAOK2Q9UL54 1235 aa18.73■□□□□ 0.59
SVOP-203ENST00000550436 DENND2AQ9ULE3 1009 aa18.73■□□□□ 0.59
SVOP-203ENST00000550436 GAKO14976 1311 aa18.73■□□□□ 0.59
SVOP-203ENST00000550436 ENTPD3O75355 529 aa18.72■□□□□ 0.59
SVOP-203ENST00000550436 CIAO1O76071 339 aa18.72■□□□□ 0.59
SVOP-203ENST00000550436 TIMM10P62072 90 aa18.72■□□□□ 0.59
SVOP-203ENST00000550436 MAP3K10Q02779 954 aa18.72■□□□□ 0.59
SVOP-203ENST00000550436 TREML2Q5T2D2 321 aa18.72■□□□□ 0.59
SVOP-203ENST00000550436 CCDC102BQ68D86 513 aa18.72■□□□□ 0.59
SVOP-203ENST00000550436 FASTKD5Q7L8L6 764 aaKnown RBP18.72■□□□□ 0.59
SVOP-203ENST00000550436 LRRFIP2Q9Y608 721 aaKnown RBP18.72■□□□□ 0.59
SVOP-203ENST00000550436 TNPO2O14787 897 aaKnown RBP18.71■□□□□ 0.59
SVOP-203ENST00000550436 TFRCP02786 760 aaKnown RBP18.71■□□□□ 0.59
SVOP-203ENST00000550436 RASGRF1Q13972 1273 aa18.71■□□□□ 0.59
SVOP-203ENST00000550436 ANKRD13CQ8N6S4 541 aa18.71■□□□□ 0.59
SVOP-203ENST00000550436 DIS3LQ8TF46 1054 aaKnown RBP18.71■□□□□ 0.59
SVOP-203ENST00000550436 ZNF384Q8TF68 577 aa18.71■□□□□ 0.59
SVOP-203ENST00000550436 ABCF2Q9UG63 623 aa18.71■□□□□ 0.59
SVOP-203ENST00000550436 NR2E3Q9Y5X4 410 aa18.71■□□□□ 0.59
SVOP-203ENST00000550436 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.71■□□□□ 0.59
SVOP-203ENST00000550436 UBTFL1P0CB47 393 aaPredicted RBP18.7■□□□□ 0.58
SVOP-203ENST00000550436 BTDP43251 543 aa18.7■□□□□ 0.58
SVOP-203ENST00000550436 LRCH3Q96II8 777 aa18.7■□□□□ 0.58
SVOP-203ENST00000550436 STAP2Q9UGK3 403 aa18.7■□□□□ 0.58
SVOP-203ENST00000550436 SEMA3EO15041 775 aa18.69■□□□□ 0.58
SVOP-203ENST00000550436 CTNND1O60716 968 aaKnown RBP18.69■□□□□ 0.58
SVOP-203ENST00000550436 RRP1BQ14684 758 aaKnown RBP18.69■□□□□ 0.58
SVOP-203ENST00000550436 DZIP1Q86YF9 867 aaKnown RBP18.69■□□□□ 0.58
SVOP-203ENST00000550436 SMCR8Q8TEV9 937 aaPredicted RBP18.69■□□□□ 0.58
SVOP-203ENST00000550436 PAWRQ96IZ0 340 aaKnown RBP18.69■□□□□ 0.58
SVOP-203ENST00000550436 SMC4Q9NTJ3 1288 aa18.69■□□□□ 0.58
SVOP-203ENST00000550436 EVI5O60447 810 aa18.68■□□□□ 0.58
SVOP-203ENST00000550436 IL15P40933 162 aaPredicted RBP18.68■□□□□ 0.58
SVOP-203ENST00000550436 RHBDL3P58872 404 aa18.68■□□□□ 0.58
SVOP-203ENST00000550436 TRIM32Q13049 653 aa18.68■□□□□ 0.58
SVOP-203ENST00000550436 IRF5Q13568 498 aa18.68■□□□□ 0.58
SVOP-203ENST00000550436 PXYLP1Q8TE99 480 aa18.68■□□□□ 0.58
SVOP-203ENST00000550436 PAK6Q9NQU5 681 aaPredicted RBP18.68■□□□□ 0.58
SVOP-203ENST00000550436 FBXO3Q9UK99 471 aa18.68■□□□□ 0.58
SVOP-203ENST00000550436 SLC45A1Q9Y2W3 748 aa18.68■□□□□ 0.58
SVOP-203ENST00000550436 PEX10O60683 326 aa18.67■□□□□ 0.58
SVOP-203ENST00000550436 PI16Q6UXB8 463 aa18.67■□□□□ 0.58
SVOP-203ENST00000550436 MEIS3Q99687 375 aa18.67■□□□□ 0.58
SVOP-203ENST00000550436 CRISPLD2Q9H0B8 497 aa18.67■□□□□ 0.58
SVOP-203ENST00000550436 NOB1Q9ULX3 412 aaKnown RBP18.67■□□□□ 0.58
SVOP-203ENST00000550436 AGTPBP1Q9UPW5 1226 aa18.67■□□□□ 0.58
SVOP-203ENST00000550436 ATAD5Q96QE3 1844 aa18.67■□□□□ 0.58
SVOP-203ENST00000550436 MECOMQ03112 1051 aa18.66■□□□□ 0.58
SVOP-203ENST00000550436 TFCP2Q12800 502 aa18.66■□□□□ 0.58
SVOP-203ENST00000550436 SPP2Q13103 211 aa18.66■□□□□ 0.58
SVOP-203ENST00000550436 ALDH1L2Q3SY69 923 aa18.66■□□□□ 0.58
SVOP-203ENST00000550436 TBC1D9Q6ZT07 1266 aa18.66■□□□□ 0.58
SVOP-203ENST00000550436 FAM163AQ96GL9 167 aaPredicted RBP18.66■□□□□ 0.58
SVOP-203ENST00000550436 XAGE2Q96GT9 111 aa18.66■□□□□ 0.58
SVOP-203ENST00000550436 COPRSQ9NQ92 184 aa18.66■□□□□ 0.58
SVOP-203ENST00000550436 MROH7-TTC4A0A0A0MT08 1334 aa18.66■□□□□ 0.58
SVOP-203ENST00000550436 GPR75-ASB3A0A0A6YYF3 556 aa18.65■□□□□ 0.58
SVOP-203ENST00000550436 ZGPATQ8N5A5 531 aaKnown RBP18.65■□□□□ 0.58
SVOP-203ENST00000550436 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms