RNA–Protein interactions for RNA: ENST00000550020.6

TMEM116-209, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-209ENST00000550020 RBM28Q9NW13 759 aaKnown RBP10.36□□□□□ -0.75
TMEM116-209ENST00000550020 ZSWIM5Q9P217 1185 aa10.36□□□□□ -0.75
TMEM116-209ENST00000550020 ABCF2Q9UG63 623 aa10.36□□□□□ -0.75
TMEM116-209ENST00000550020 PCDHA7Q9UN72 937 aa10.36□□□□□ -0.75
TMEM116-209ENST00000550020 AKAP11Q9UKA4 1901 aa10.36□□□□□ -0.75
TMEM116-209ENST00000550020 BCL9LQ86UU0 1499 aa10.36□□□□□ -0.75
TMEM116-209ENST00000550020 DDX60Q8IY21 1712 aaKnown RBP10.36□□□□□ -0.75
TMEM116-209ENST00000550020 DOCK2Q92608 1830 aa10.35□□□□□ -0.75
TMEM116-209ENST00000550020 NPHP1O15259 732 aa10.35□□□□□ -0.75
TMEM116-209ENST00000550020 KCNQ2O43526 872 aa10.35□□□□□ -0.75
TMEM116-209ENST00000550020 CUTAO60888 179 aa10.35□□□□□ -0.75
TMEM116-209ENST00000550020 DTNBO60941 627 aa10.35□□□□□ -0.75
TMEM116-209ENST00000550020 U2AF2P26368 475 aaKnown RBP eCLIP10.35□□□□□ -0.752e-6■■□□□ 11.9
TMEM116-209ENST00000550020 RBM6P78332 1123 aaKnown RBP10.35□□□□□ -0.75
TMEM116-209ENST00000550020 CTDSPL2Q05D32 466 aa10.35□□□□□ -0.75
TMEM116-209ENST00000550020 CHAF1AQ13111 956 aaPredicted RBP10.35□□□□□ -0.75
TMEM116-209ENST00000550020 CCDC178Q5BJE1 867 aa10.35□□□□□ -0.75
TMEM116-209ENST00000550020 RILPL1Q5EBL4 403 aa10.35□□□□□ -0.75
TMEM116-209ENST00000550020 IQCA1Q86XH1 822 aa10.35□□□□□ -0.75
TMEM116-209ENST00000550020 FMR1NBQ8N0W7 255 aaPredicted RBP10.35□□□□□ -0.75
TMEM116-209ENST00000550020 C8orf37Q96NL8 207 aa10.35□□□□□ -0.75
TMEM116-209ENST00000550020 BPIFA3Q9BQP9 254 aa10.35□□□□□ -0.75
TMEM116-209ENST00000550020 CRNKL1Q9BZJ0 848 aaKnown RBP10.35□□□□□ -0.75
TMEM116-209ENST00000550020 BCL11BQ9C0K0 894 aaPredicted RBP10.35□□□□□ -0.75
TMEM116-209ENST00000550020 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.35□□□□□ -0.75
TMEM116-209ENST00000550020 MINPP1Q9UNW1 487 aa10.35□□□□□ -0.75
TMEM116-209ENST00000550020 SCN7AQ01118 1682 aa10.34□□□□□ -0.75
TMEM116-209ENST00000550020 SMTNL1A8MU46 457 aa10.34□□□□□ -0.75
TMEM116-209ENST00000550020 MYO1BO43795 1136 aa10.34□□□□□ -0.75
TMEM116-209ENST00000550020 BMP15O95972 392 aa10.34□□□□□ -0.75
TMEM116-209ENST00000550020 POLR3DP05423 398 aaPredicted RBP10.34□□□□□ -0.75
TMEM116-209ENST00000550020 ADRA2BP18089 450 aa10.34□□□□□ -0.75
TMEM116-209ENST00000550020 HIBADHP31937 336 aaKnown RBP10.34□□□□□ -0.75
TMEM116-209ENST00000550020 ZNF75DP51815 510 aa10.34□□□□□ -0.75
TMEM116-209ENST00000550020 GSTO1P78417 241 aa10.34□□□□□ -0.75
TMEM116-209ENST00000550020 SNW1Q13573 536 aaKnown RBP10.34□□□□□ -0.75
TMEM116-209ENST00000550020 RRP12Q5JTH9 1297 aaKnown RBP10.34□□□□□ -0.75
TMEM116-209ENST00000550020 DNTTIP2Q5QJE6 756 aaKnown RBP10.34□□□□□ -0.75
TMEM116-209ENST00000550020 FBXO33Q7Z6M2 555 aa10.34□□□□□ -0.75
TMEM116-209ENST00000550020 CATIPQ7Z7H3 387 aa10.34□□□□□ -0.75
TMEM116-209ENST00000550020 ILDR1Q86SU0 546 aaPredicted RBP10.34□□□□□ -0.75
TMEM116-209ENST00000550020 LUZP1Q86V48 1076 aa10.34□□□□□ -0.75
TMEM116-209ENST00000550020 AMOTL1Q8IY63 956 aa10.34□□□□□ -0.75
TMEM116-209ENST00000550020 ELOA2Q8IYF1 753 aaPredicted RBP10.34□□□□□ -0.75
TMEM116-209ENST00000550020 MRFAP1L1Q96HT8 127 aa10.34□□□□□ -0.75
TMEM116-209ENST00000550020 PRIMPOLQ96LW4 560 aa10.34□□□□□ -0.75
TMEM116-209ENST00000550020 SLC26A6Q9BXS9 759 aa10.34□□□□□ -0.75
TMEM116-209ENST00000550020 RNF26Q9BY78 433 aaPredicted RBP10.34□□□□□ -0.75
TMEM116-209ENST00000550020 DNAJC25Q9H1X3 360 aa10.34□□□□□ -0.75
TMEM116-209ENST00000550020 FOXP1Q9H334 677 aaPredicted RBP10.34□□□□□ -0.75
TMEM116-209ENST00000550020 BRMS1Q9HCU9 246 aa10.34□□□□□ -0.75
TMEM116-209ENST00000550020 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.34□□□□□ -0.75
TMEM116-209ENST00000550020 ATP8A2Q9NTI2 1148 aa10.34□□□□□ -0.75
TMEM116-209ENST00000550020 CCNL1Q9UK58 526 aaPredicted RBP10.34□□□□□ -0.75
TMEM116-209ENST00000550020 UBAP1LF5GYI3 381 aa10.33□□□□□ -0.76
TMEM116-209ENST00000550020 GNPATO15228 680 aa10.33□□□□□ -0.76
TMEM116-209ENST00000550020 NRDCO43847 1150 aa10.33□□□□□ -0.76
TMEM116-209ENST00000550020 DDAH1O94760 285 aa10.33□□□□□ -0.76
TMEM116-209ENST00000550020 RFC4P35249 363 aa10.33□□□□□ -0.76
TMEM116-209ENST00000550020 GYG1P46976 350 aa10.33□□□□□ -0.76
TMEM116-209ENST00000550020 NOLC1Q14978 699 aaKnown RBP eCLIP10.33□□□□□ -0.76
TMEM116-209ENST00000550020 NTRK3Q16288 839 aa10.33□□□□□ -0.76
TMEM116-209ENST00000550020 TBC1D9BQ66K14 1250 aa10.33□□□□□ -0.76
TMEM116-209ENST00000550020 PLA2G4DQ86XP0 818 aa10.33□□□□□ -0.76
TMEM116-209ENST00000550020 NOSTRINQ8IVI9 506 aa10.33□□□□□ -0.76
TMEM116-209ENST00000550020 ZNF654Q8IZM8 581 aa10.33□□□□□ -0.76
TMEM116-209ENST00000550020 MIGA1Q8NAN2 632 aa10.33□□□□□ -0.76
TMEM116-209ENST00000550020 FANCBQ8NB91 859 aa10.33□□□□□ -0.76
TMEM116-209ENST00000550020 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.33□□□□□ -0.76
TMEM116-209ENST00000550020 GOLPH3LQ9H4A5 285 aa10.33□□□□□ -0.76
TMEM116-209ENST00000550020 FAM13BQ9NYF5 915 aa10.33□□□□□ -0.76
TMEM116-209ENST00000550020 ARPP21Q9UBL0 812 aaPredicted RBP10.33□□□□□ -0.76
TMEM116-209ENST00000550020 USP21Q9UK80 565 aa10.33□□□□□ -0.76
TMEM116-209ENST00000550020 LEMD3Q9Y2U8 911 aa10.33□□□□□ -0.76
TMEM116-209ENST00000550020 CLIC4Q9Y696 253 aa10.33□□□□□ -0.76
TMEM116-209ENST00000550020 MORC2Q9Y6X9 1032 aaPredicted RBP10.33□□□□□ -0.76
TMEM116-209ENST00000550020 TCHHQ07283 1943 aa10.33□□□□□ -0.76
TMEM116-209ENST00000550020 FAM237AA0A1B0GTK4 181 aa10.32□□□□□ -0.76
TMEM116-209ENST00000550020 MINDY4BA8MYZ0 360 aa10.32□□□□□ -0.76
TMEM116-209ENST00000550020 PRKAB2O43741 272 aa10.32□□□□□ -0.76
TMEM116-209ENST00000550020 ORC4O43929 436 aa10.32□□□□□ -0.76
TMEM116-209ENST00000550020 MMP1P03956 469 aa10.32□□□□□ -0.76
TMEM116-209ENST00000550020 LDHCP07864 332 aa10.32□□□□□ -0.76
TMEM116-209ENST00000550020 CDC27P30260 824 aa10.32□□□□□ -0.76
TMEM116-209ENST00000550020 SYKP43405 635 aa10.32□□□□□ -0.76
TMEM116-209ENST00000550020 PDE4BQ07343 736 aa10.32□□□□□ -0.76
TMEM116-209ENST00000550020 TRAPPC3LQ5T215 181 aa10.32□□□□□ -0.76
TMEM116-209ENST00000550020 KANK3Q6NY19 840 aa10.32□□□□□ -0.76
TMEM116-209ENST00000550020 BICDL1Q6ZP65 573 aa10.32□□□□□ -0.76
TMEM116-209ENST00000550020 CRACR2BQ8N4Y2 399 aaPredicted RBP10.32□□□□□ -0.76
TMEM116-209ENST00000550020 WDR66Q8TBY9 1149 aa10.32□□□□□ -0.76
TMEM116-209ENST00000550020 FAM84BQ96KN1 310 aaPredicted RBP10.32□□□□□ -0.76
TMEM116-209ENST00000550020 ZSCAN10Q96SZ4 725 aaPredicted RBP10.32□□□□□ -0.76
TMEM116-209ENST00000550020 RIOK1Q9BRS2 568 aaKnown RBP10.32□□□□□ -0.76
TMEM116-209ENST00000550020 SPTLC3Q9NUV7 552 aa10.32□□□□□ -0.76
TMEM116-209ENST00000550020 KIAA1468Q9P260 1216 aa10.32□□□□□ -0.76
TMEM116-209ENST00000550020 MYH15Q9Y2K3 1946 aa10.31□□□□□ -0.76
TMEM116-209ENST00000550020 C4AP0C0L4 1744 aa10.31□□□□□ -0.76
TMEM116-209ENST00000550020 C4BP0C0L5 1744 aa10.31□□□□□ -0.76
TMEM116-209ENST00000550020 ZNF202O95125 648 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms