RNA–Protein interactions for RNA: ENST00000549324.1

RPH3A-214, Transcript of rabphilin 3A, humanhuman

TSL 4

Gene RPH3A, Length 2,349 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3A-214ENST00000549324 Q6ZUG5 572 aa13.13□□□□□ -0.31
RPH3A-214ENST00000549324 CLASRPQ8N2M8 674 aaKnown RBP13.13□□□□□ -0.31
RPH3A-214ENST00000549324 JMYQ8N9B5 988 aa13.13□□□□□ -0.31
RPH3A-214ENST00000549324 NSUN7Q8NE18 718 aaKnown RBP13.13□□□□□ -0.31
RPH3A-214ENST00000549324 LZTFL1Q9NQ48 299 aa13.13□□□□□ -0.31
RPH3A-214ENST00000549324 RBM28Q9NW13 759 aaKnown RBP13.13□□□□□ -0.31
RPH3A-214ENST00000549324 MED23Q9ULK4 1368 aa13.13□□□□□ -0.31
RPH3A-214ENST00000549324 CTAGE15A4D2H0 777 aa13.13□□□□□ -0.31
RPH3A-214ENST00000549324 ZNF202O95125 648 aa13.13□□□□□ -0.31
RPH3A-214ENST00000549324 CTAGE8P0CG41 777 aa13.13□□□□□ -0.31
RPH3A-214ENST00000549324 ADKP55263 362 aaKnown RBP13.13□□□□□ -0.31
RPH3A-214ENST00000549324 CTAGE6Q86UF2 777 aa13.13□□□□□ -0.31
RPH3A-214ENST00000549324 CTAGE4Q8IX94 777 aa13.13□□□□□ -0.31
RPH3A-214ENST00000549324 ZKSCAN4Q969J2 545 aaPredicted RBP13.13□□□□□ -0.31
RPH3A-214ENST00000549324 XAGE2Q96GT9 111 aa13.13□□□□□ -0.31
RPH3A-214ENST00000549324 VEZTQ9HBM0 779 aa13.13□□□□□ -0.31
RPH3A-214ENST00000549324 FANCLQ9NW38 375 aa13.13□□□□□ -0.31
RPH3A-214ENST00000549324 HPCAL4Q9UM19 191 aa13.13□□□□□ -0.31
RPH3A-214ENST00000549324 CAPN7Q9Y6W3 813 aa13.13□□□□□ -0.31
RPH3A-214ENST00000549324 ZC3H4Q9UPT8 1303 aaKnown RBP13.12□□□□□ -0.31
RPH3A-214ENST00000549324 COL22A1Q8NFW1 1626 aaPredicted RBP13.12□□□□□ -0.31
RPH3A-214ENST00000549324 A0A0D9SFI3 127 aa13.12□□□□□ -0.31
RPH3A-214ENST00000549324 SHTN1A0MZ66 631 aa13.12□□□□□ -0.31
RPH3A-214ENST00000549324 CHUKO15111 745 aa13.12□□□□□ -0.31
RPH3A-214ENST00000549324 RDXP35241 583 aaKnown RBP13.12□□□□□ -0.31
RPH3A-214ENST00000549324 FNTAP49354 379 aa13.12□□□□□ -0.31
RPH3A-214ENST00000549324 PIP4K2BP78356 416 aa13.12□□□□□ -0.31
RPH3A-214ENST00000549324 KIF4BQ2VIQ3 1234 aa13.12□□□□□ -0.31
RPH3A-214ENST00000549324 FAM76AQ8TAV0 307 aa13.12□□□□□ -0.31
RPH3A-214ENST00000549324 N4BP2L2Q92802 583 aaPredicted RBP13.12□□□□□ -0.31
RPH3A-214ENST00000549324 PTPDC1A2A3K4 754 aa13.12□□□□□ -0.31
RPH3A-214ENST00000549324 CTAGE9A4FU28 777 aa13.12□□□□□ -0.31
RPH3A-214ENST00000549324 TOM1O60784 492 aa13.12□□□□□ -0.31
RPH3A-214ENST00000549324 GCFC2P16383 781 aaKnown RBP13.12□□□□□ -0.31
RPH3A-214ENST00000549324 OS9Q13438 667 aaPredicted RBP13.12□□□□□ -0.31
RPH3A-214ENST00000549324 SF3A1Q15459 793 aaKnown RBP13.12□□□□□ -0.31
RPH3A-214ENST00000549324 WHAMMP3Q1A5X7 153 aa13.12□□□□□ -0.31
RPH3A-214ENST00000549324 MTHFSDQ2M296 383 aaKnown RBP13.12□□□□□ -0.31
RPH3A-214ENST00000549324 SPECC1LQ69YQ0 1117 aa13.12□□□□□ -0.31
RPH3A-214ENST00000549324 AMOTL1Q8IY63 956 aa13.12□□□□□ -0.31
RPH3A-214ENST00000549324 LINC00301Q8NCQ3 95 aa13.12□□□□□ -0.31
RPH3A-214ENST00000549324 BCAS4Q8TDM0 211 aa13.12□□□□□ -0.31
RPH3A-214ENST00000549324 NEK1Q96PY6 1258 aa13.12□□□□□ -0.31
RPH3A-214ENST00000549324 H0YHG0 523 aa13.11□□□□□ -0.31
RPH3A-214ENST00000549324 PFKFB2O60825 505 aa13.11□□□□□ -0.31
RPH3A-214ENST00000549324 ERCC3P19447 782 aa13.11□□□□□ -0.31
RPH3A-214ENST00000549324 NF2P35240 595 aa13.11□□□□□ -0.31
RPH3A-214ENST00000549324 MTF1Q14872 753 aa13.11□□□□□ -0.31
RPH3A-214ENST00000549324 PREPLQ4J6C6 727 aaPredicted RBP13.11□□□□□ -0.31
RPH3A-214ENST00000549324 KCNG4Q8TDN1 519 aa13.11□□□□□ -0.31
RPH3A-214ENST00000549324 TUBE1Q9UJT0 475 aa13.11□□□□□ -0.31
RPH3A-214ENST00000549324 MYO1FO00160 1098 aa13.11□□□□□ -0.31
RPH3A-214ENST00000549324 FSBPO95073 299 aa13.11□□□□□ -0.31
RPH3A-214ENST00000549324 CTDNEP1O95476 244 aa13.11□□□□□ -0.31
RPH3A-214ENST00000549324 STK38Q15208 465 aa13.11□□□□□ -0.31
RPH3A-214ENST00000549324 ZNF569Q5MCW4 686 aa13.11□□□□□ -0.31
RPH3A-214ENST00000549324 TEX11Q8IYF3 940 aa13.11□□□□□ -0.31
RPH3A-214ENST00000549324 NOA1Q8NC60 698 aaKnown RBP13.11□□□□□ -0.31
RPH3A-214ENST00000549324 RIN2Q8WYP3 895 aaPredicted RBP13.11□□□□□ -0.31
RPH3A-214ENST00000549324 CD248Q9HCU0 757 aa13.11□□□□□ -0.31
RPH3A-214ENST00000549324 EIF3HO15372 352 aaKnown RBP eCLIP13.1□□□□□ -0.31
RPH3A-214ENST00000549324 NEBLO76041 1014 aa13.1□□□□□ -0.31
RPH3A-214ENST00000549324 TFRCP02786 760 aaKnown RBP13.1□□□□□ -0.31
RPH3A-214ENST00000549324 PPFIA1Q13136 1202 aa13.1□□□□□ -0.31
RPH3A-214ENST00000549324 NECTIN2Q92692 538 aa13.1□□□□□ -0.31
RPH3A-214ENST00000549324 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.1□□□□□ -0.31
RPH3A-214ENST00000549324 PRDM11Q9NQV5 511 aa13.1□□□□□ -0.31
RPH3A-214ENST00000549324 ADGRG1Q9Y653 693 aa13.1□□□□□ -0.31
RPH3A-214ENST00000549324 GRIN2DO15399 1336 aa13.1□□□□□ -0.31
RPH3A-214ENST00000549324 GOLGA6CA6NDK9 693 aa13.1□□□□□ -0.31
RPH3A-214ENST00000549324 SOWAHDA6NJG2 315 aa13.1□□□□□ -0.31
RPH3A-214ENST00000549324 TMCO5BA8MYB1 307 aa13.1□□□□□ -0.31
RPH3A-214ENST00000549324 UBAP1LF5GYI3 381 aa13.1□□□□□ -0.31
RPH3A-214ENST00000549324 ALDH1L1O75891 902 aa13.1□□□□□ -0.31
RPH3A-214ENST00000549324 GOLGA6DP0CG33 693 aa13.1□□□□□ -0.31
RPH3A-214ENST00000549324 GGCXP38435 758 aa13.1□□□□□ -0.31
RPH3A-214ENST00000549324 STIM1Q13586 685 aa13.1□□□□□ -0.31
RPH3A-214ENST00000549324 USPL1Q5W0Q7 1092 aa13.1□□□□□ -0.31
RPH3A-214ENST00000549324 COG1Q8WTW3 980 aa13.1□□□□□ -0.31
RPH3A-214ENST00000549324 CAPS2Q9BXY5 557 aa13.1□□□□□ -0.31
RPH3A-214ENST00000549324 GOLGA6AQ9NYA3 693 aa13.1□□□□□ -0.31
RPH3A-214ENST00000549324 SALL1Q9NSC2 1324 aa13.09□□□□□ -0.31
RPH3A-214ENST00000549324 YEATS4O95619 227 aa13.09□□□□□ -0.31
RPH3A-214ENST00000549324 PFKFB1P16118 471 aa13.09□□□□□ -0.31
RPH3A-214ENST00000549324 PAX7P23759 505 aa13.09□□□□□ -0.31
RPH3A-214ENST00000549324 GUCY1B3Q02153 619 aa13.09□□□□□ -0.31
RPH3A-214ENST00000549324 ZNF589Q86UQ0 364 aaPredicted RBP13.09□□□□□ -0.31
RPH3A-214ENST00000549324 FMNL3Q8IVF7 1028 aa13.09□□□□□ -0.31
RPH3A-214ENST00000549324 ODF2LQ9ULJ1 636 aa13.09□□□□□ -0.31
RPH3A-214ENST00000549324 CLIC4Q9Y696 253 aa13.09□□□□□ -0.31
RPH3A-214ENST00000549324 LAMA4Q16363 1823 aa13.09□□□□□ -0.31
RPH3A-214ENST00000549324 A0A0U1RQJ8 604 aa13.08□□□□□ -0.31
RPH3A-214ENST00000549324 SPTLC2O15270 562 aa13.08□□□□□ -0.31
RPH3A-214ENST00000549324 NBPF7P0C2Y1 421 aaPredicted RBP13.08□□□□□ -0.31
RPH3A-214ENST00000549324 MCM3P25205 808 aa13.08□□□□□ -0.31
RPH3A-214ENST00000549324 MRPL12P52815 198 aaKnown RBP13.08□□□□□ -0.31
RPH3A-214ENST00000549324 IRX1P78414 480 aaPredicted RBP13.08□□□□□ -0.31
RPH3A-214ENST00000549324 BIRC2Q13490 618 aa13.08□□□□□ -0.31
RPH3A-214ENST00000549324 WLSQ5T9L3 541 aa13.08□□□□□ -0.31
RPH3A-214ENST00000549324 CCDC148Q8NFR7 591 aa13.08□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms