RNA–Protein interactions for RNA: ENST00000549308.5

PTPRR-209, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRR, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-209ENST00000549308 MAPKAPK5Q8IW41 473 aa14.28□□□□□ -0.12
PTPRR-209ENST00000549308 AMOTL1Q8IY63 956 aa14.28□□□□□ -0.12
PTPRR-209ENST00000549308 MB21D2Q8IYB1 491 aaPredicted RBP14.28□□□□□ -0.12
PTPRR-209ENST00000549308 JDP2Q8WYK2 163 aa14.28□□□□□ -0.12
PTPRR-209ENST00000549308 MCM9Q9NXL9 1143 aa14.28□□□□□ -0.12
PTPRR-209ENST00000549308 NEDD4P46934 1319 aa14.28□□□□□ -0.12
PTPRR-209ENST00000549308 LTBP3Q9NS15 1303 aa14.28□□□□□ -0.12
PTPRR-209ENST00000549308 ADAMTSL1Q8N6G6 1762 aa14.28□□□□□ -0.12
PTPRR-209ENST00000549308 CYP2D7A0A087X1C5 515 aa14.27□□□□□ -0.12
PTPRR-209ENST00000549308 B4E1Z4 1266 aa14.27□□□□□ -0.12
PTPRR-209ENST00000549308 PSMD14O00487 310 aa14.27□□□□□ -0.12
PTPRR-209ENST00000549308 PRC1O43663 620 aa14.27□□□□□ -0.12
PTPRR-209ENST00000549308 RHBDL3P58872 404 aa14.27□□□□□ -0.12
PTPRR-209ENST00000549308 HDLBPQ00341 1268 aaKnown RBP14.27□□□□□ -0.12
PTPRR-209ENST00000549308 SBK1Q52WX2 424 aa14.27□□□□□ -0.12
PTPRR-209ENST00000549308 RRP12Q5JTH9 1297 aaKnown RBP14.27□□□□□ -0.12
PTPRR-209ENST00000549308 MRIQ9BWK5 157 aa14.27□□□□□ -0.12
PTPRR-209ENST00000549308 KRT23Q9C075 422 aa14.27□□□□□ -0.12
PTPRR-209ENST00000549308 SH2B1Q9NRF2 756 aaPredicted RBP14.27□□□□□ -0.12
PTPRR-209ENST00000549308 USP40Q9NVE5 1235 aa14.27□□□□□ -0.12
PTPRR-209ENST00000549308 SLC3A2P08195 630 aaKnown RBP14.26□□□□□ -0.13
PTPRR-209ENST00000549308 VIL1P09327 827 aaKnown RBP14.26□□□□□ -0.13
PTPRR-209ENST00000549308 USP17L8P0C7I0 530 aa14.26□□□□□ -0.13
PTPRR-209ENST00000549308 CUL4AQ13619 759 aa14.26□□□□□ -0.13
PTPRR-209ENST00000549308 INCENPQ9NQS7 918 aa14.26□□□□□ -0.13
PTPRR-209ENST00000549308 TPCN1Q9ULQ1 816 aa14.26□□□□□ -0.13
PTPRR-209ENST00000549308 TACC3Q9Y6A5 838 aa14.26□□□□□ -0.13
PTPRR-209ENST00000549308 WDR19Q8NEZ3 1342 aa14.26□□□□□ -0.13
PTPRR-209ENST00000549308 CDK5RAP2Q96SN8 1893 aa14.26□□□□□ -0.13
PTPRR-209ENST00000549308 LARGE1O95461 756 aa14.26□□□□□ -0.13
PTPRR-209ENST00000549308 POLR3DP05423 398 aaPredicted RBP14.26□□□□□ -0.13
PTPRR-209ENST00000549308 CYP2D6P10635 497 aa14.26□□□□□ -0.13
PTPRR-209ENST00000549308 CYB5R4Q7L1T6 521 aa14.26□□□□□ -0.13
PTPRR-209ENST00000549308 BRF1Q92994 677 aa14.26□□□□□ -0.13
PTPRR-209ENST00000549308 ZDHHC15Q96MV8 337 aa14.26□□□□□ -0.13
PTPRR-209ENST00000549308 SAP30BPQ9UHR5 308 aaKnown RBP14.26□□□□□ -0.13
PTPRR-209ENST00000549308 SERPINA10Q9UK55 444 aa14.26□□□□□ -0.13
PTPRR-209ENST00000549308 HDAC9Q9UKV0 1011 aa14.26□□□□□ -0.13
PTPRR-209ENST00000549308 ANTXR2P58335 489 aa14.25□□□□□ -0.13
PTPRR-209ENST00000549308 SLC4A8Q2Y0W8 1093 aa14.25□□□□□ -0.13
PTPRR-209ENST00000549308 CIAPIN1Q6FI81 312 aa14.25□□□□□ -0.13
PTPRR-209ENST00000549308 MKRN1Q9UHC7 482 aaKnown RBP14.25□□□□□ -0.13
PTPRR-209ENST00000549308 FLT1P17948 1338 aa14.25□□□□□ -0.13
PTPRR-209ENST00000549308 FOCADQ5VW36 1801 aa14.24□□□□□ -0.13
PTPRR-209ENST00000549308 SMIM22K7EJ46 135 aa14.24□□□□□ -0.13
PTPRR-209ENST00000549308 KDM4AO75164 1064 aa14.24□□□□□ -0.13
PTPRR-209ENST00000549308 PCP11498 1178 aaKnown RBP14.24□□□□□ -0.13
PTPRR-209ENST00000549308 APOBRQ0VD83 1088 aa14.24□□□□□ -0.13
PTPRR-209ENST00000549308 PICALMQ13492 652 aa14.24□□□□□ -0.13
PTPRR-209ENST00000549308 ME3Q16798 604 aa14.24□□□□□ -0.13
PTPRR-209ENST00000549308 C12orf60Q5U649 245 aa14.24□□□□□ -0.13
PTPRR-209ENST00000549308 APOBEC3HQ6NTF7 200 aaKnown RBP14.24□□□□□ -0.13
PTPRR-209ENST00000549308 CDC42EP5Q6NZY7 148 aa14.24□□□□□ -0.13
PTPRR-209ENST00000549308 ARHGAP27Q6ZUM4 889 aa14.24□□□□□ -0.13
PTPRR-209ENST00000549308 CCDC83Q8IWF9 413 aa14.24□□□□□ -0.13
PTPRR-209ENST00000549308 INTS4Q96HW7 963 aaKnown RBP14.24□□□□□ -0.13
PTPRR-209ENST00000549308 AGXT2Q9BYV1 514 aa14.24□□□□□ -0.13
PTPRR-209ENST00000549308 CHMP5Q9NZZ3 219 aa14.24□□□□□ -0.13
PTPRR-209ENST00000549308 NAP1L2Q9ULW6 460 aaPredicted RBP14.24□□□□□ -0.13
PTPRR-209ENST00000549308 EVX2Q03828 476 aa14.23□□□□□ -0.13
PTPRR-209ENST00000549308 CXCL9Q07325 125 aa14.23□□□□□ -0.13
PTPRR-209ENST00000549308 STK3Q13188 491 aa14.23□□□□□ -0.13
PTPRR-209ENST00000549308 TNIP1Q15025 636 aa14.23□□□□□ -0.13
PTPRR-209ENST00000549308 CFAP100Q494V2 611 aa14.23□□□□□ -0.13
PTPRR-209ENST00000549308 AGBL3Q8NEM8 1001 aa14.23□□□□□ -0.13
PTPRR-209ENST00000549308 ESR2Q92731 530 aa14.23□□□□□ -0.13
PTPRR-209ENST00000549308 TMEM87BQ96K49 555 aa14.23□□□□□ -0.13
PTPRR-209ENST00000549308 SYT17Q9BSW7 474 aa14.23□□□□□ -0.13
PTPRR-209ENST00000549308 CWC22Q9HCG8 908 aaKnown RBP14.23□□□□□ -0.13
PTPRR-209ENST00000549308 ZBTB12Q9Y330 459 aaPredicted RBP14.23□□□□□ -0.13
PTPRR-209ENST00000549308 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.23□□□□□ -0.13
PTPRR-209ENST00000549308 PCDHAC2Q9Y5I4 1007 aa14.23□□□□□ -0.13
PTPRR-209ENST00000549308 ECM29Q5VYK3 1845 aa14.23□□□□□ -0.13
PTPRR-209ENST00000549308 MYH1P12882 1939 aa14.23□□□□□ -0.13
PTPRR-209ENST00000549308 DDX60LQ5H9U9 1706 aaKnown RBP14.23□□□□□ -0.13
PTPRR-209ENST00000549308 EIF6P56537 245 aaKnown RBP14.23□□□□□ -0.13
PTPRR-209ENST00000549308 PDE4BQ07343 736 aa14.23□□□□□ -0.13
PTPRR-209ENST00000549308 FBXL16Q8N461 479 aa14.23□□□□□ -0.13
PTPRR-209ENST00000549308 NECAB1Q8N987 351 aa14.23□□□□□ -0.13
PTPRR-209ENST00000549308 NKX2-3Q8TAU0 364 aa14.23□□□□□ -0.13
PTPRR-209ENST00000549308 GMLQ99445 158 aa14.23□□□□□ -0.13
PTPRR-209ENST00000549308 GPHNQ9NQX3 736 aaPredicted RBP14.23□□□□□ -0.13
PTPRR-209ENST00000549308 ZSWIM5Q9P217 1185 aa14.23□□□□□ -0.13
PTPRR-209ENST00000549308 SH2B2O14492 632 aaPredicted RBP14.22□□□□□ -0.13
PTPRR-209ENST00000549308 IFIT3O14879 490 aaKnown RBP14.22□□□□□ -0.13
PTPRR-209ENST00000549308 RANBP6O60518 1105 aaKnown RBP14.22□□□□□ -0.13
PTPRR-209ENST00000549308 PRDM1O75626 825 aa14.22□□□□□ -0.13
PTPRR-209ENST00000549308 WDHD1O75717 1129 aaPredicted RBP14.22□□□□□ -0.13
PTPRR-209ENST00000549308 TMEM67Q5HYA8 995 aa14.22□□□□□ -0.13
PTPRR-209ENST00000549308 OGFOD1Q8N543 542 aa14.22□□□□□ -0.13
PTPRR-209ENST00000549308 CIZ1Q9ULV3 898 aaPredicted RBP14.22□□□□□ -0.13
PTPRR-209ENST00000549308 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.22□□□□□ -0.13
PTPRR-209ENST00000549308 ERICH2A1L162 156 aa14.21□□□□□ -0.13
PTPRR-209ENST00000549308 ORC4O43929 436 aa14.21□□□□□ -0.13
PTPRR-209ENST00000549308 FGRP09769 529 aa14.21□□□□□ -0.13
PTPRR-209ENST00000549308 DDIT3P35638 169 aa14.21□□□□□ -0.13
PTPRR-209ENST00000549308 PRELPP51888 382 aa14.21□□□□□ -0.13
PTPRR-209ENST00000549308 SART3Q15020 963 aaKnown RBP14.21□□□□□ -0.13
PTPRR-209ENST00000549308 DYNLL2Q96FJ2 89 aa14.21□□□□□ -0.13
PTPRR-209ENST00000549308 DDX4Q9NQI0 724 aaKnown RBP14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms