RNA–Protein interactions for RNA: ENST00000549226.5

CACNB3-211, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 2

Gene CACNB3, Length 929 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-211ENST00000549226 NEK1Q96PY6 1258 aa16.78■□□□□ 0.28
CACNB3-211ENST00000549226 ZNF287Q9HBT7 754 aa16.78■□□□□ 0.28
CACNB3-211ENST00000549226 MCM9Q9NXL9 1143 aa16.78■□□□□ 0.28
CACNB3-211ENST00000549226 WDR19Q8NEZ3 1342 aa16.77■□□□□ 0.28
CACNB3-211ENST00000549226 E7EWF7 191 aa16.77■□□□□ 0.28
CACNB3-211ENST00000549226 WDHD1O75717 1129 aaPredicted RBP16.77■□□□□ 0.28
CACNB3-211ENST00000549226 CASTP20810 708 aaKnown RBP16.77■□□□□ 0.28
CACNB3-211ENST00000549226 GMPSP49915 693 aaPredicted RBP16.77■□□□□ 0.28
CACNB3-211ENST00000549226 CTR9Q6PD62 1173 aa16.77■□□□□ 0.28
CACNB3-211ENST00000549226 RUFY3Q7L099 469 aa16.77■□□□□ 0.28
CACNB3-211ENST00000549226 RALYLQ86SE5 291 aaKnown RBP16.77■□□□□ 0.28
CACNB3-211ENST00000549226 NCOA7Q8NI08 942 aa16.77■□□□□ 0.28
CACNB3-211ENST00000549226 ZBED3Q96IU2 234 aaPredicted RBP16.77■□□□□ 0.28
CACNB3-211ENST00000549226 KRT23Q9C075 422 aa16.77■□□□□ 0.28
CACNB3-211ENST00000549226 MYOZ2Q9NPC6 264 aa16.77■□□□□ 0.28
CACNB3-211ENST00000549226 GJA3Q9Y6H8 435 aa16.77■□□□□ 0.28
CACNB3-211ENST00000549226 ROBO3Q96MS0 1386 aa16.77■□□□□ 0.27
CACNB3-211ENST00000549226 COL2A1P02458 1487 aaPredicted RBP16.76■□□□□ 0.27
CACNB3-211ENST00000549226 DCAF8L1A6NGE4 600 aa16.76■□□□□ 0.27
CACNB3-211ENST00000549226 USP17L12C9JPN9 530 aa16.76■□□□□ 0.27
CACNB3-211ENST00000549226 USP17L21D6R901 530 aa16.76■□□□□ 0.27
CACNB3-211ENST00000549226 H7C1D1 291 aa16.76■□□□□ 0.27
CACNB3-211ENST00000549226 ENTPD3O75355 529 aa16.76■□□□□ 0.27
CACNB3-211ENST00000549226 ANKRD1Q15327 319 aa16.76■□□□□ 0.27
CACNB3-211ENST00000549226 AKNAD1Q5T1N1 836 aa16.76■□□□□ 0.27
CACNB3-211ENST00000549226 MFSD6Q6ZSS7 791 aa16.76■□□□□ 0.27
CACNB3-211ENST00000549226 TTC6Q86TZ1 520 aa16.76■□□□□ 0.27
CACNB3-211ENST00000549226 HSCBQ8IWL3 235 aa16.76■□□□□ 0.27
CACNB3-211ENST00000549226 ALDH8A1Q9H2A2 487 aaPredicted RBP16.76■□□□□ 0.27
CACNB3-211ENST00000549226 DHX36Q9H2U1 1008 aaKnown RBP16.76■□□□□ 0.27
CACNB3-211ENST00000549226 DICER1Q9UPY3 1922 aaKnown RBP16.76■□□□□ 0.27
CACNB3-211ENST00000549226 UTRNP46939 3433 aa16.75■□□□□ 0.27
CACNB3-211ENST00000549226 POLR3DP05423 398 aaPredicted RBP16.75■□□□□ 0.27
CACNB3-211ENST00000549226 HLA-DOAP06340 250 aa16.75■□□□□ 0.27
CACNB3-211ENST00000549226 FGRP09769 529 aa16.75■□□□□ 0.27
CACNB3-211ENST00000549226 RPS6KB1P23443 525 aa16.75■□□□□ 0.27
CACNB3-211ENST00000549226 NEK4P51957 841 aa16.75■□□□□ 0.27
CACNB3-211ENST00000549226 HAND2P61296 217 aa16.75■□□□□ 0.27
CACNB3-211ENST00000549226 PDE4BQ07343 736 aa16.75■□□□□ 0.27
CACNB3-211ENST00000549226 SPDYE2Q495Y8 402 aa16.75■□□□□ 0.27
CACNB3-211ENST00000549226 C12orf60Q5U649 245 aa16.75■□□□□ 0.27
CACNB3-211ENST00000549226 DPY19L2Q6NUT2 758 aa16.75■□□□□ 0.27
CACNB3-211ENST00000549226 DHX32Q7L7V1 743 aaKnown RBP16.75■□□□□ 0.27
CACNB3-211ENST00000549226 MAPKAPK5Q8IW41 473 aa16.75■□□□□ 0.27
CACNB3-211ENST00000549226 MICALL2Q8IY33 904 aa16.75■□□□□ 0.27
CACNB3-211ENST00000549226 MTA3Q9BTC8 594 aa16.75■□□□□ 0.27
CACNB3-211ENST00000549226 OSBPL5Q9H0X9 879 aaPredicted RBP16.75■□□□□ 0.27
CACNB3-211ENST00000549226 CNOT7Q9UIV1 285 aaKnown RBP16.75■□□□□ 0.27
CACNB3-211ENST00000549226 TIAM2Q8IVF5 1701 aa16.75■□□□□ 0.27
CACNB3-211ENST00000549226 MINDY4BA8MYZ0 360 aa16.74■□□□□ 0.27
CACNB3-211ENST00000549226 LMOD1P29536 600 aaPredicted RBP16.74■□□□□ 0.27
CACNB3-211ENST00000549226 TNFAIP1Q13829 316 aa16.74■□□□□ 0.27
CACNB3-211ENST00000549226 ADCK5Q3MIX3 580 aa16.74■□□□□ 0.27
CACNB3-211ENST00000549226 TBC1D10CQ8IV04 446 aa16.74■□□□□ 0.27
CACNB3-211ENST00000549226 FBXL16Q8N461 479 aa16.74■□□□□ 0.27
CACNB3-211ENST00000549226 PRMT6Q96LA8 375 aaPredicted RBP16.74■□□□□ 0.27
CACNB3-211ENST00000549226 GPRC5DQ9NZD1 345 aa16.74■□□□□ 0.27
CACNB3-211ENST00000549226 LAMA4Q16363 1823 aa16.73■□□□□ 0.27
CACNB3-211ENST00000549226 ORC4O43929 436 aa16.73■□□□□ 0.27
CACNB3-211ENST00000549226 MCM5P33992 734 aa16.73■□□□□ 0.27
CACNB3-211ENST00000549226 STOX1Q6ZVD7 989 aa16.73■□□□□ 0.27
CACNB3-211ENST00000549226 FAM83AQ86UY5 434 aa16.73■□□□□ 0.27
CACNB3-211ENST00000549226 ESR2Q92731 530 aa16.73■□□□□ 0.27
CACNB3-211ENST00000549226 UPF3BQ9BZI7 483 aaKnown RBP16.73■□□□□ 0.27
CACNB3-211ENST00000549226 NBPF3Q9H094 633 aa16.73■□□□□ 0.27
CACNB3-211ENST00000549226 EHD4Q9H223 541 aa16.73■□□□□ 0.27
CACNB3-211ENST00000549226 PDRG1Q9NUG6 133 aa16.73■□□□□ 0.27
CACNB3-211ENST00000549226 WNT10BO00744 389 aa16.72■□□□□ 0.27
CACNB3-211ENST00000549226 TNNI2P48788 182 aa16.72■□□□□ 0.27
CACNB3-211ENST00000549226 MB21D2Q8IYB1 491 aaPredicted RBP16.72■□□□□ 0.27
CACNB3-211ENST00000549226 L3MBTL3Q96JM7 780 aaPredicted RBP16.72■□□□□ 0.27
CACNB3-211ENST00000549226 TTC14Q96N46 770 aa16.72■□□□□ 0.27
CACNB3-211ENST00000549226 IPO9Q96P70 1041 aaKnown RBP16.72■□□□□ 0.27
CACNB3-211ENST00000549226 TDRD3Q9H7E2 651 aaKnown RBP16.72■□□□□ 0.27
CACNB3-211ENST00000549226 ZNF70Q9UC06 446 aaPredicted RBP16.72■□□□□ 0.27
CACNB3-211ENST00000549226 DAXXQ9UER7 740 aaPredicted RBP16.72■□□□□ 0.27
CACNB3-211ENST00000549226 SWAP70Q9UH65 585 aa16.72■□□□□ 0.27
CACNB3-211ENST00000549226 TAF6LQ9Y6J9 622 aa16.72■□□□□ 0.27
CACNB3-211ENST00000549226 ATRNL1Q5VV63 1379 aa16.72■□□□□ 0.27
CACNB3-211ENST00000549226 SBF1O95248 1867 aa16.71■□□□□ 0.27
CACNB3-211ENST00000549226 PICALMQ13492 652 aa16.71■□□□□ 0.27
CACNB3-211ENST00000549226 SART3Q15020 963 aaKnown RBP16.71■□□□□ 0.27
CACNB3-211ENST00000549226 KIF4BQ2VIQ3 1234 aa16.71■□□□□ 0.27
CACNB3-211ENST00000549226 TMEM87BQ96K49 555 aa16.71■□□□□ 0.27
CACNB3-211ENST00000549226 DDX4Q9NQI0 724 aaKnown RBP16.71■□□□□ 0.27
CACNB3-211ENST00000549226 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.71■□□□□ 0.27
CACNB3-211ENST00000549226 K7ELQ4 463 aaPredicted RBP16.7■□□□□ 0.26
CACNB3-211ENST00000549226 EXOSC10Q01780 885 aaKnown RBP16.7■□□□□ 0.26
CACNB3-211ENST00000549226 CTDSPL2Q05D32 466 aa16.7■□□□□ 0.26
CACNB3-211ENST00000549226 NFIAQ12857 509 aa16.7■□□□□ 0.26
CACNB3-211ENST00000549226 CCDC178Q5BJE1 867 aa16.7■□□□□ 0.26
CACNB3-211ENST00000549226 C16orf86Q6ZW13 317 aa16.7■□□□□ 0.26
CACNB3-211ENST00000549226 FAM151AQ8WW52 585 aa16.7■□□□□ 0.26
CACNB3-211ENST00000549226 ADARB2Q9NS39 739 aaKnown RBP16.7■□□□□ 0.26
CACNB3-211ENST00000549226 PI4KBQ9UBF8 816 aa16.7■□□□□ 0.26
CACNB3-211ENST00000549226 FAM198AQ9UFP1 575 aa16.7■□□□□ 0.26
CACNB3-211ENST00000549226 DDX60LQ5H9U9 1706 aaKnown RBP16.7■□□□□ 0.26
CACNB3-211ENST00000549226 NEDD4P46934 1319 aa16.7■□□□□ 0.26
CACNB3-211ENST00000549226 NAV1Q8NEY1 1877 aa16.69■□□□□ 0.26
CACNB3-211ENST00000549226 GLTPD2A6NH11 291 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms