RNA–Protein interactions for RNA: ENST00000548645.5

NPAS3-206, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,926 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-206ENST00000548645 MDM2Q00987 491 aaPredicted RBP26.45■■□□□ 1.82
NPAS3-206ENST00000548645 TTC39AQ5SRH9 613 aa26.45■■□□□ 1.82
NPAS3-206ENST00000548645 RAI14Q9P0K7 980 aa26.45■■□□□ 1.82
NPAS3-206ENST00000548645 MAN1B1Q9UKM7 699 aa26.45■■□□□ 1.82
NPAS3-206ENST00000548645 NUTM2AQ8IVF1 878 aaPredicted RBP26.44■■□□□ 1.82
NPAS3-206ENST00000548645 KRI1Q8N9T8 703 aaKnown RBP26.44■■□□□ 1.82
NPAS3-206ENST00000548645 CWC25Q9NXE8 425 aaPredicted RBP26.44■■□□□ 1.82
NPAS3-206ENST00000548645 H3BQF6 201 aa26.44■■□□□ 1.82
NPAS3-206ENST00000548645 IPO4Q8TEX9 1081 aaKnown RBP26.44■■□□□ 1.82
NPAS3-206ENST00000548645 RBM33Q96EV2 1170 aaKnown RBP26.44■■□□□ 1.82
NPAS3-206ENST00000548645 CEP126Q9P2H0 1117 aa26.44■■□□□ 1.82
NPAS3-206ENST00000548645 MAP3K15Q6ZN16 1313 aa26.43■■□□□ 1.82
NPAS3-206ENST00000548645 GYS2P54840 703 aa26.43■■□□□ 1.82
NPAS3-206ENST00000548645 CEP112Q8N8E3 955 aa26.43■■□□□ 1.82
NPAS3-206ENST00000548645 ZNF594Q96JF6 807 aaPredicted RBP26.43■■□□□ 1.82
NPAS3-206ENST00000548645 ATG3Q9NT62 314 aa26.43■■□□□ 1.82
NPAS3-206ENST00000548645 DDX60Q8IY21 1712 aaKnown RBP26.43■■□□□ 1.82
NPAS3-206ENST00000548645 TUBB4BP68371 445 aa26.43■■□□□ 1.82
NPAS3-206ENST00000548645 POSTNQ15063 836 aa26.43■■□□□ 1.82
NPAS3-206ENST00000548645 LMOD2Q6P5Q4 547 aa26.42■■□□□ 1.82
NPAS3-206ENST00000548645 MRPL44Q9H9J2 332 aaKnown RBP26.42■■□□□ 1.82
NPAS3-206ENST00000548645 FOXN1O15353 648 aa26.42■■□□□ 1.82
NPAS3-206ENST00000548645 ACTN2P35609 894 aa26.42■■□□□ 1.82
NPAS3-206ENST00000548645 HDXQ7Z353 690 aa26.42■■□□□ 1.82
NPAS3-206ENST00000548645 IQUBQ8NA54 791 aa26.42■■□□□ 1.82
NPAS3-206ENST00000548645 PANX2Q96RD6 677 aa26.42■■□□□ 1.82
NPAS3-206ENST00000548645 GNL3Q9BVP2 549 aaKnown RBP eCLIP26.42■■□□□ 1.82
NPAS3-206ENST00000548645 AKR1B15C9JRZ8 316 aaPredicted RBP26.42■■□□□ 1.82
NPAS3-206ENST00000548645 FMR1Q06787 632 aaKnown RBP eCLIP26.42■■□□□ 1.82
NPAS3-206ENST00000548645 MYO1CO00159 1063 aa26.41■■□□□ 1.82
NPAS3-206ENST00000548645 ERLIN1O75477 346 aa26.41■■□□□ 1.82
NPAS3-206ENST00000548645 TUBB2AQ13885 445 aa26.41■■□□□ 1.82
NPAS3-206ENST00000548645 TUBB2BQ9BVA1 445 aa26.41■■□□□ 1.82
NPAS3-206ENST00000548645 PUS7LQ9H0K6 701 aaKnown RBP26.41■■□□□ 1.82
NPAS3-206ENST00000548645 TATP17735 454 aaPredicted RBP26.41■■□□□ 1.82
NPAS3-206ENST00000548645 NT5DC1Q5TFE4 455 aa26.41■■□□□ 1.82
NPAS3-206ENST00000548645 IFNL2Q8IZJ0 200 aa26.41■■□□□ 1.82
NPAS3-206ENST00000548645 MSL3Q8N5Y2 521 aaKnown RBP26.41■■□□□ 1.82
NPAS3-206ENST00000548645 PHKBQ93100 1093 aa26.41■■□□□ 1.82
NPAS3-206ENST00000548645 ZSWIM4Q9H7M6 989 aa26.41■■□□□ 1.82
NPAS3-206ENST00000548645 CDC23Q9UJX2 597 aa26.41■■□□□ 1.82
NPAS3-206ENST00000548645 TAOK2Q9UL54 1235 aa26.41■■□□□ 1.82
NPAS3-206ENST00000548645 GPAA1O43292 621 aa26.4■■□□□ 1.82
NPAS3-206ENST00000548645 KIF5CO60282 957 aa26.4■■□□□ 1.82
NPAS3-206ENST00000548645 NR1I3Q14994 352 aa26.4■■□□□ 1.82
NPAS3-206ENST00000548645 TRIML1Q8N9V2 468 aa26.4■■□□□ 1.82
NPAS3-206ENST00000548645 EIF3JO75822 258 aaKnown RBP26.4■■□□□ 1.82
NPAS3-206ENST00000548645 IARSP41252 1262 aaKnown RBP26.4■■□□□ 1.82
NPAS3-206ENST00000548645 USP5P45974 858 aa26.4■■□□□ 1.82
NPAS3-206ENST00000548645 BEND6Q5SZJ8 279 aaPredicted RBP26.4■■□□□ 1.82
NPAS3-206ENST00000548645 LEKR1Q6ZMV7 388 aa26.4■■□□□ 1.82
NPAS3-206ENST00000548645 NAA15Q9BXJ9 866 aaKnown RBP26.4■■□□□ 1.82
NPAS3-206ENST00000548645 RAB21Q9UL25 225 aa26.4■■□□□ 1.82
NPAS3-206ENST00000548645 SH2B2O14492 632 aaPredicted RBP26.39■■□□□ 1.82
NPAS3-206ENST00000548645 MORC3Q14149 939 aa26.39■■□□□ 1.82
NPAS3-206ENST00000548645 APOA5Q6Q788 366 aa26.39■■□□□ 1.82
NPAS3-206ENST00000548645 IRX2Q9BZI1 471 aaPredicted RBP26.39■■□□□ 1.82
NPAS3-206ENST00000548645 ANKZF1Q9H8Y5 726 aa26.39■■□□□ 1.82
NPAS3-206ENST00000548645 LZTFL1Q9NQ48 299 aa26.39■■□□□ 1.82
NPAS3-206ENST00000548645 AKAP2Q9Y2D5 859 aa26.39■■□□□ 1.82
NPAS3-206ENST00000548645 TNNT3P45378 269 aaPredicted RBP26.38■■□□□ 1.81
NPAS3-206ENST00000548645 MTF1Q14872 753 aa26.38■■□□□ 1.81
NPAS3-206ENST00000548645 PUS3Q9BZE2 481 aaKnown RBP26.38■■□□□ 1.81
NPAS3-206ENST00000548645 PDE11AQ9HCR9 933 aa26.38■■□□□ 1.81
NPAS3-206ENST00000548645 ADGRG1Q9Y653 693 aa26.38■■□□□ 1.81
NPAS3-206ENST00000548645 SARSP49591 514 aaKnown RBP26.38■■□□□ 1.81
NPAS3-206ENST00000548645 MCM6Q14566 821 aa26.38■■□□□ 1.81
NPAS3-206ENST00000548645 TRMT44Q8IYL2 757 aaKnown RBP26.38■■□□□ 1.81
NPAS3-206ENST00000548645 MSANTD4Q8NCY6 345 aa26.38■■□□□ 1.81
NPAS3-206ENST00000548645 A0A1B0GTH6 734 aa26.38■■□□□ 1.81
NPAS3-206ENST00000548645 IVLP07476 585 aa26.38■■□□□ 1.81
NPAS3-206ENST00000548645 RXRAP19793 462 aa26.38■■□□□ 1.81
NPAS3-206ENST00000548645 HSP90AB3PQ58FF7 597 aa26.38■■□□□ 1.81
NPAS3-206ENST00000548645 XAGE2Q96GT9 111 aa26.38■■□□□ 1.81
NPAS3-206ENST00000548645 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP26.38■■□□□ 1.81
NPAS3-206ENST00000548645 VPS18Q9P253 973 aa26.38■■□□□ 1.81
NPAS3-206ENST00000548645 PUF60Q9UHX1 559 aaKnown RBP26.38■■□□□ 1.81
NPAS3-206ENST00000548645 SOWAHDA6NJG2 315 aa26.37■■□□□ 1.81
NPAS3-206ENST00000548645 SRLQ86TD4 932 aa26.37■■□□□ 1.81
NPAS3-206ENST00000548645 DCAF5Q96JK2 942 aa26.37■■□□□ 1.81
NPAS3-206ENST00000548645 MAPK8IP2Q13387 824 aaPredicted RBP26.37■■□□□ 1.81
NPAS3-206ENST00000548645 SPECC1Q5M775 1068 aa26.37■■□□□ 1.81
NPAS3-206ENST00000548645 PPFIBP1Q86W92 1011 aa26.37■■□□□ 1.81
NPAS3-206ENST00000548645 MICU3Q86XE3 530 aa26.37■■□□□ 1.81
NPAS3-206ENST00000548645 ANKLE2Q86XL3 938 aa26.37■■□□□ 1.81
NPAS3-206ENST00000548645 C10orf67Q8IYJ2 551 aa26.37■■□□□ 1.81
NPAS3-206ENST00000548645 SAMSN1Q9NSI8 373 aaKnown RBP26.37■■□□□ 1.81
NPAS3-206ENST00000548645 NLRP2Q9NX02 1062 aa26.37■■□□□ 1.81
NPAS3-206ENST00000548645 ZBTB43O43298 467 aa26.36■■□□□ 1.81
NPAS3-206ENST00000548645 CYB5R4Q7L1T6 521 aa26.36■■□□□ 1.81
NPAS3-206ENST00000548645 ERCC5P28715 1186 aaPredicted RBP26.36■■□□□ 1.81
NPAS3-206ENST00000548645 ADORA1P30542 326 aa26.36■■□□□ 1.81
NPAS3-206ENST00000548645 POLR2DO15514 142 aaKnown RBP26.35■■□□□ 1.81
NPAS3-206ENST00000548645 ZAP70P43403 619 aa26.35■■□□□ 1.81
NPAS3-206ENST00000548645 KANK3Q6NY19 840 aa26.35■■□□□ 1.81
NPAS3-206ENST00000548645 NOSTRINQ8IVI9 506 aa26.35■■□□□ 1.81
NPAS3-206ENST00000548645 STK11IPQ8N1F8 1099 aa26.35■■□□□ 1.81
NPAS3-206ENST00000548645 TMEM87BQ96K49 555 aa26.35■■□□□ 1.81
NPAS3-206ENST00000548645 SERTAD1Q9UHV2 236 aa26.35■■□□□ 1.81
NPAS3-206ENST00000548645 LCMT1Q9UIC8 334 aa26.35■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms