RNA–Protein interactions for RNA: ENST00000547562.5

BRF1-212, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 2,405 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-212ENST00000547562 TRIM29Q14134 588 aa18■□□□□ 0.47
BRF1-212ENST00000547562 SF3B3Q15393 1217 aaKnown RBP18■□□□□ 0.47
BRF1-212ENST00000547562 LINC00116Q8NCU8 138 aa18■□□□□ 0.47
BRF1-212ENST00000547562 KIAA1468Q9P260 1216 aa18■□□□□ 0.47
BRF1-212ENST00000547562 CLIP2Q9UDT6 1046 aa18■□□□□ 0.47
BRF1-212ENST00000547562 IQSEC3Q9UPP2 1182 aaPredicted RBP18■□□□□ 0.47
BRF1-212ENST00000547562 CYP7A1P22680 504 aa18■□□□□ 0.47
BRF1-212ENST00000547562 U2AF2P26368 475 aaKnown RBP eCLIP18■□□□□ 0.471e-6■■■□□ 16.3
BRF1-212ENST00000547562 SSRP1Q08945 709 aaKnown RBP18■□□□□ 0.47
BRF1-212ENST00000547562 GNL2Q13823 731 aaKnown RBP18■□□□□ 0.47
BRF1-212ENST00000547562 SART3Q15020 963 aaKnown RBP18■□□□□ 0.47
BRF1-212ENST00000547562 RRP12Q5JTH9 1297 aaKnown RBP18■□□□□ 0.47
BRF1-212ENST00000547562 C3orf67Q6ZVT6 689 aa18■□□□□ 0.47
BRF1-212ENST00000547562 NAT10Q9H0A0 1025 aaKnown RBP18■□□□□ 0.47
BRF1-212ENST00000547562 WDHD1O75717 1129 aaPredicted RBP17.99■□□□□ 0.47
BRF1-212ENST00000547562 ZNF202O95125 648 aa17.99■□□□□ 0.47
BRF1-212ENST00000547562 FMNL1O95466 1100 aaPredicted RBP17.99■□□□□ 0.47
BRF1-212ENST00000547562 IFNAR1P17181 557 aa17.99■□□□□ 0.47
BRF1-212ENST00000547562 MRFAP1L1Q96HT8 127 aa17.99■□□□□ 0.47
BRF1-212ENST00000547562 MTA3Q9BTC8 594 aa17.99■□□□□ 0.47
BRF1-212ENST00000547562 SLC26A6Q9BXS9 759 aa17.99■□□□□ 0.47
BRF1-212ENST00000547562 TOMM22Q9NS69 142 aa17.99■□□□□ 0.47
BRF1-212ENST00000547562 GNL3LQ9NVN8 582 aaKnown RBP17.99■□□□□ 0.47
BRF1-212ENST00000547562 BSDC1Q9NW68 430 aaPredicted RBP17.99■□□□□ 0.47
BRF1-212ENST00000547562 CACNA1SQ13698 1873 aa17.99■□□□□ 0.47
BRF1-212ENST00000547562 RRP9O43818 475 aaKnown RBP17.99■□□□□ 0.47
BRF1-212ENST00000547562 PFKFB1P16118 471 aa17.99■□□□□ 0.47
BRF1-212ENST00000547562 GYG1P46976 350 aa17.99■□□□□ 0.47
BRF1-212ENST00000547562 UBE4AQ14139 1066 aa17.99■□□□□ 0.47
BRF1-212ENST00000547562 WTAPQ15007 396 aa17.99■□□□□ 0.47
BRF1-212ENST00000547562 ADGRA1Q86SQ6 560 aa17.99■□□□□ 0.47
BRF1-212ENST00000547562 PRIMPOLQ96LW4 560 aa17.99■□□□□ 0.47
BRF1-212ENST00000547562 RNF41Q9H4P4 317 aaPredicted RBP17.99■□□□□ 0.47
BRF1-212ENST00000547562 MROH7-TTC4A0A0A0MT08 1334 aa17.99■□□□□ 0.47
BRF1-212ENST00000547562 SCN7AQ01118 1682 aa17.99■□□□□ 0.47
BRF1-212ENST00000547562 COL1A1P02452 1464 aaPredicted RBP17.98■□□□□ 0.47
BRF1-212ENST00000547562 PPP6R2O75170 966 aa17.98■□□□□ 0.47
BRF1-212ENST00000547562 MARCKSP29966 332 aaPredicted RBP17.98■□□□□ 0.47
BRF1-212ENST00000547562 ABCF2Q9UG63 623 aa17.98■□□□□ 0.47
BRF1-212ENST00000547562 PPARAQ07869 468 aa17.98■□□□□ 0.47
BRF1-212ENST00000547562 PTPAQ15257 358 aa17.98■□□□□ 0.47
BRF1-212ENST00000547562 JMYQ8N9B5 988 aa17.98■□□□□ 0.47
BRF1-212ENST00000547562 WASF1Q92558 559 aa17.98■□□□□ 0.47
BRF1-212ENST00000547562 MAP3K14Q99558 947 aa17.98■□□□□ 0.47
BRF1-212ENST00000547562 ZKSCAN3Q9BRR0 538 aa17.98■□□□□ 0.47
BRF1-212ENST00000547562 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.98■□□□□ 0.47
BRF1-212ENST00000547562 TAOK2Q9UL54 1235 aa17.98■□□□□ 0.47
BRF1-212ENST00000547562 ERICH2A1L162 156 aa17.97■□□□□ 0.47
BRF1-212ENST00000547562 UBE2Q2LH0YL09 131 aa17.97■□□□□ 0.47
BRF1-212ENST00000547562 DYNC1I1O14576 645 aa17.97■□□□□ 0.47
BRF1-212ENST00000547562 LRMPQ12912 555 aa17.97■□□□□ 0.47
BRF1-212ENST00000547562 RAI14Q9P0K7 980 aa17.97■□□□□ 0.47
BRF1-212ENST00000547562 MYH6P13533 1939 aa17.97■□□□□ 0.47
BRF1-212ENST00000547562 MAGEB6P1A0A0J9YX57 407 aa17.97■□□□□ 0.47
BRF1-212ENST00000547562 SLC3A2P08195 630 aaKnown RBP17.97■□□□□ 0.47
BRF1-212ENST00000547562 HSP90AA2PQ14568 343 aaPredicted RBP17.97■□□□□ 0.47
BRF1-212ENST00000547562 ZRSR1Q15695 479 aaKnown RBP17.97■□□□□ 0.47
BRF1-212ENST00000547562 RTN1Q16799 776 aa17.97■□□□□ 0.47
BRF1-212ENST00000547562 TMTC2Q8N394 836 aa17.97■□□□□ 0.47
BRF1-212ENST00000547562 AOPEPQ8N6M6 819 aa17.97■□□□□ 0.47
BRF1-212ENST00000547562 MYRIPQ8NFW9 859 aa17.97■□□□□ 0.47
BRF1-212ENST00000547562 BAZ2AQ9UIF9 1905 aaKnown RBP17.97■□□□□ 0.47
BRF1-212ENST00000547562 MYH2Q9UKX2 1941 aa17.97■□□□□ 0.47
BRF1-212ENST00000547562 WTIPA6NIX2 430 aaPredicted RBP17.96■□□□□ 0.47
BRF1-212ENST00000547562 CCDC144BQ3MJ40 725 aa17.96■□□□□ 0.47
BRF1-212ENST00000547562 CAVIN4Q5BKX8 364 aa17.96■□□□□ 0.47
BRF1-212ENST00000547562 SDR42E1Q8WUS8 393 aa17.96■□□□□ 0.47
BRF1-212ENST00000547562 FBXW7Q969H0 707 aa17.96■□□□□ 0.47
BRF1-212ENST00000547562 MINPP1Q9UNW1 487 aa17.96■□□□□ 0.47
BRF1-212ENST00000547562 MYH13Q9UKX3 1938 aa17.96■□□□□ 0.47
BRF1-212ENST00000547562 CNTNAP4Q9C0A0 1308 aa17.96■□□□□ 0.46
BRF1-212ENST00000547562 RGL2O15211 777 aa17.96■□□□□ 0.46
BRF1-212ENST00000547562 RCAN1P53805 252 aa17.96■□□□□ 0.46
BRF1-212ENST00000547562 FAM98CQ17RN3 349 aaKnown RBP17.96■□□□□ 0.46
BRF1-212ENST00000547562 DPCR1Q3MIW9 517 aa17.96■□□□□ 0.46
BRF1-212ENST00000547562 STK11IPQ8N1F8 1099 aa17.96■□□□□ 0.46
BRF1-212ENST00000547562 TIGD1Q96MW7 591 aa17.96■□□□□ 0.46
BRF1-212ENST00000547562 BPIFA3Q9BQP9 254 aa17.96■□□□□ 0.46
BRF1-212ENST00000547562 ANAPC4Q9UJX5 808 aa17.96■□□□□ 0.46
BRF1-212ENST00000547562 HPSEQ9Y251 543 aa17.96■□□□□ 0.46
BRF1-212ENST00000547562 RBM6P78332 1123 aaKnown RBP17.95■□□□□ 0.46
BRF1-212ENST00000547562 TRIM22Q8IYM9 498 aa17.95■□□□□ 0.46
BRF1-212ENST00000547562 RIOK1Q9BRS2 568 aaKnown RBP17.95■□□□□ 0.46
BRF1-212ENST00000547562 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.95■□□□□ 0.46
BRF1-212ENST00000547562 GUCY1A2P33402 732 aa17.94■□□□□ 0.46
BRF1-212ENST00000547562 SYKP43405 635 aa17.94■□□□□ 0.46
BRF1-212ENST00000547562 KCNQ4P56696 695 aa17.94■□□□□ 0.46
BRF1-212ENST00000547562 SLC10A5Q5PT55 438 aa17.94■□□□□ 0.46
BRF1-212ENST00000547562 BICDL1Q6ZP65 573 aa17.94■□□□□ 0.46
BRF1-212ENST00000547562 FAM237AA0A1B0GTK4 181 aa17.94■□□□□ 0.46
BRF1-212ENST00000547562 CCDC196A0A1B0GTZ2 297 aa17.94■□□□□ 0.46
BRF1-212ENST00000547562 MINDY4BA8MYZ0 360 aa17.94■□□□□ 0.46
BRF1-212ENST00000547562 MMP1P03956 469 aa17.94■□□□□ 0.46
BRF1-212ENST00000547562 GTF2E1P29083 439 aaPredicted RBP17.94■□□□□ 0.46
BRF1-212ENST00000547562 TBC1D9BQ66K14 1250 aa17.94■□□□□ 0.46
BRF1-212ENST00000547562 SHC4Q6S5L8 630 aa17.94■□□□□ 0.46
BRF1-212ENST00000547562 NBPF11Q86T75 865 aa17.94■□□□□ 0.46
BRF1-212ENST00000547562 NOSTRINQ8IVI9 506 aa17.94■□□□□ 0.46
BRF1-212ENST00000547562 CACTINQ8WUQ7 758 aaKnown RBP17.94■□□□□ 0.46
BRF1-212ENST00000547562 CELF1Q92879 486 aaKnown RBP17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms