RNA–Protein interactions for RNA: ENST00000547065.1

VDR-204, Transcript of vitamin D receptor, humanhuman

TSL 2

Gene VDR, Length 1,782 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-204ENST00000547065 GYS1P13807 737 aa21.71■■□□□ 1.07
VDR-204ENST00000547065 RXRAP19793 462 aa21.71■■□□□ 1.07
VDR-204ENST00000547065 CHAF1AQ13111 956 aaPredicted RBP21.71■■□□□ 1.07
VDR-204ENST00000547065 CAMK4Q16566 473 aa21.71■■□□□ 1.07
VDR-204ENST00000547065 PRR5LQ6MZQ0 368 aa21.71■■□□□ 1.07
VDR-204ENST00000547065 CACNA1SQ13698 1873 aa21.71■■□□□ 1.07
VDR-204ENST00000547065 STK36Q9NRP7 1315 aa21.71■■□□□ 1.07
VDR-204ENST00000547065 KIF23Q02241 960 aaPredicted RBP21.71■■□□□ 1.07
VDR-204ENST00000547065 SSRP1Q08945 709 aaKnown RBP21.71■■□□□ 1.07
VDR-204ENST00000547065 KRT27Q7Z3Y8 459 aa21.71■■□□□ 1.07
VDR-204ENST00000547065 CCAR1Q8IX12 1150 aaKnown RBP21.71■■□□□ 1.07
VDR-204ENST00000547065 FTOQ9C0B1 505 aaKnown RBP eCLIP21.71■■□□□ 1.07
VDR-204ENST00000547065 IFNAR1P17181 557 aa21.7■■□□□ 1.06
VDR-204ENST00000547065 ST5P78524 1137 aa21.7■■□□□ 1.06
VDR-204ENST00000547065 TXNRD3Q86VQ6 643 aa21.7■■□□□ 1.06
VDR-204ENST00000547065 CCDC144CPQ8IYA2 1237 aa21.7■■□□□ 1.06
VDR-204ENST00000547065 WASF1Q92558 559 aa21.7■■□□□ 1.06
VDR-204ENST00000547065 RPGRQ92834 1020 aaKnown RBP21.7■■□□□ 1.06
VDR-204ENST00000547065 UBAC1Q9BSL1 405 aa21.7■■□□□ 1.06
VDR-204ENST00000547065 CRNKL1Q9BZJ0 848 aaKnown RBP21.7■■□□□ 1.06
VDR-204ENST00000547065 POLR3EQ9NVU0 708 aa21.7■■□□□ 1.06
VDR-204ENST00000547065 XDHP47989 1333 aa21.7■■□□□ 1.06
VDR-204ENST00000547065 CCDC196A0A1B0GTZ2 297 aa21.69■■□□□ 1.06
VDR-204ENST00000547065 YEATS4O95619 227 aa21.69■■□□□ 1.06
VDR-204ENST00000547065 FGRP09769 529 aa21.69■■□□□ 1.06
VDR-204ENST00000547065 CLCN1P35523 988 aa21.69■■□□□ 1.06
VDR-204ENST00000547065 MYSM1Q5VVJ2 828 aa21.69■■□□□ 1.06
VDR-204ENST00000547065 C15orf52Q6ZUT6 534 aaKnown RBP21.69■■□□□ 1.06
VDR-204ENST00000547065 PHKBQ93100 1093 aa21.69■■□□□ 1.06
VDR-204ENST00000547065 MYL10Q9BUA6 226 aa21.69■■□□□ 1.06
VDR-204ENST00000547065 FMNL1O95466 1100 aaPredicted RBP21.69■■□□□ 1.06
VDR-204ENST00000547065 SERPINB2P05120 415 aa21.69■■□□□ 1.06
VDR-204ENST00000547065 POLR3DP05423 398 aaPredicted RBP21.69■■□□□ 1.06
VDR-204ENST00000547065 ME1P48163 572 aa21.69■■□□□ 1.06
VDR-204ENST00000547065 TYRO3Q06418 890 aa21.69■■□□□ 1.06
VDR-204ENST00000547065 CCDC73Q6ZRK6 1079 aa21.69■■□□□ 1.06
VDR-204ENST00000547065 STK11IPQ8N1F8 1099 aa21.69■■□□□ 1.06
VDR-204ENST00000547065 LINC00301Q8NCQ3 95 aa21.69■■□□□ 1.06
VDR-204ENST00000547065 WDR66Q8TBY9 1149 aa21.69■■□□□ 1.06
VDR-204ENST00000547065 KCNG4Q8TDN1 519 aa21.69■■□□□ 1.06
VDR-204ENST00000547065 ZKSCAN3Q9BRR0 538 aa21.69■■□□□ 1.06
VDR-204ENST00000547065 ATP8A2Q9NTI2 1148 aa21.69■■□□□ 1.06
VDR-204ENST00000547065 CTAGE5O15320 804 aa21.68■■□□□ 1.06
VDR-204ENST00000547065 TRIM29Q14134 588 aa21.68■■□□□ 1.06
VDR-204ENST00000547065 PPP2R5BQ15173 497 aa21.68■■□□□ 1.06
VDR-204ENST00000547065 RTN1Q16799 776 aa21.68■■□□□ 1.06
VDR-204ENST00000547065 CRY2Q49AN0 593 aa21.68■■□□□ 1.06
VDR-204ENST00000547065 KRT40Q6A162 431 aa21.68■■□□□ 1.06
VDR-204ENST00000547065 CTR9Q6PD62 1173 aa21.68■■□□□ 1.06
VDR-204ENST00000547065 ZSCAN30Q86W11 494 aa21.68■■□□□ 1.06
VDR-204ENST00000547065 RBM17Q96I25 401 aaKnown RBP21.68■■□□□ 1.06
VDR-204ENST00000547065 GJB4Q9NTQ9 266 aa21.68■■□□□ 1.06
VDR-204ENST00000547065 TNRC6CQ9HCJ0 1690 aaKnown RBP21.67■■□□□ 1.06
VDR-204ENST00000547065 A0A1W2PQ27 194 aa21.67■■□□□ 1.06
VDR-204ENST00000547065 A0A1W2PQ64 194 aa21.67■■□□□ 1.06
VDR-204ENST00000547065 A0A1W2PQD8 194 aa21.67■■□□□ 1.06
VDR-204ENST00000547065 RANBP6O60518 1105 aaKnown RBP21.67■■□□□ 1.06
VDR-204ENST00000547065 STK38Q15208 465 aa21.67■■□□□ 1.06
VDR-204ENST00000547065 ADALQ6DHV7 355 aa21.67■■□□□ 1.06
VDR-204ENST00000547065 TDRD7Q8NHU6 1098 aaKnown RBP21.67■■□□□ 1.06
VDR-204ENST00000547065 SLC26A6Q9BXS9 759 aa21.67■■□□□ 1.06
VDR-204ENST00000547065 CCDC39Q9UFE4 941 aa21.67■■□□□ 1.06
VDR-204ENST00000547065 PCDHA7Q9UN72 937 aa21.67■■□□□ 1.06
VDR-204ENST00000547065 MYH15Q9Y2K3 1946 aa21.67■■□□□ 1.06
VDR-204ENST00000547065 KIF28PB7ZC32 967 aa21.66■■□□□ 1.06
VDR-204ENST00000547065 PRDX5P30044 214 aa21.66■■□□□ 1.06
VDR-204ENST00000547065 SEC23AQ15436 765 aa21.66■■□□□ 1.06
VDR-204ENST00000547065 SF3A1Q15459 793 aaKnown RBP21.66■■□□□ 1.06
VDR-204ENST00000547065 ZNF804AQ7Z570 1209 aa21.66■■□□□ 1.06
VDR-204ENST00000547065 CKAP2LQ8IYA6 745 aa21.66■■□□□ 1.06
VDR-204ENST00000547065 AIFM3Q96NN9 605 aa21.66■■□□□ 1.06
VDR-204ENST00000547065 CLIC4Q9Y696 253 aa21.66■■□□□ 1.06
VDR-204ENST00000547065 CHD4Q14839 1912 aa21.66■■□□□ 1.06
VDR-204ENST00000547065 USP17L12C9JPN9 530 aa21.66■■□□□ 1.06
VDR-204ENST00000547065 USP17L21D6R901 530 aa21.66■■□□□ 1.06
VDR-204ENST00000547065 TRIM37O94972 964 aa21.66■■□□□ 1.06
VDR-204ENST00000547065 FAM160A1Q05DH4 1040 aa21.66■■□□□ 1.06
VDR-204ENST00000547065 SASS6Q6UVJ0 657 aa21.66■■□□□ 1.06
VDR-204ENST00000547065 DZIP1Q86YF9 867 aaKnown RBP21.66■■□□□ 1.06
VDR-204ENST00000547065 TRIM22Q8IYM9 498 aa21.66■■□□□ 1.06
VDR-204ENST00000547065 ZNF654Q8IZM8 581 aa21.66■■□□□ 1.06
VDR-204ENST00000547065 FANCBQ8NB91 859 aa21.66■■□□□ 1.06
VDR-204ENST00000547065 AATFQ9NY61 560 aaKnown RBP eCLIP21.66■■□□□ 1.06
VDR-204ENST00000547065 MRVI1Q9Y6F6 885 aa21.66■■□□□ 1.06
VDR-204ENST00000547065 BBOX1O75936 387 aa21.65■■□□□ 1.06
VDR-204ENST00000547065 SBK1Q52WX2 424 aa21.65■■□□□ 1.06
VDR-204ENST00000547065 ANO1Q5XXA6 986 aa21.65■■□□□ 1.06
VDR-204ENST00000547065 ENGASEQ8NFI3 743 aa21.65■■□□□ 1.06
VDR-204ENST00000547065 FAM200AQ8TCP9 573 aa21.65■■□□□ 1.06
VDR-204ENST00000547065 ZSCAN10Q96SZ4 725 aaPredicted RBP21.65■■□□□ 1.06
VDR-204ENST00000547065 GOLPH3LQ9H4A5 285 aa21.65■■□□□ 1.06
VDR-204ENST00000547065 SPTLC2O15270 562 aa21.64■■□□□ 1.06
VDR-204ENST00000547065 SLC3A2P08195 630 aaKnown RBP21.64■■□□□ 1.06
VDR-204ENST00000547065 ATP2B4P23634 1241 aa21.64■■□□□ 1.06
VDR-204ENST00000547065 GSTO1P78417 241 aa21.64■■□□□ 1.06
VDR-204ENST00000547065 SNW1Q13573 536 aaKnown RBP21.64■■□□□ 1.06
VDR-204ENST00000547065 FSIP1Q8NA03 581 aa21.64■■□□□ 1.06
VDR-204ENST00000547065 DCP1AQ9NPI6 582 aaPredicted RBP21.64■■□□□ 1.06
VDR-204ENST00000547065 TNKSO95271 1327 aa21.64■■□□□ 1.06
VDR-204ENST00000547065 CYP2D7A0A087X1C5 515 aa21.64■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms