RNA–Protein interactions for RNA: ENST00000546125.1

KNTC1-215, Transcript of kinetochore associated 1, humanhuman

TSL 5

Gene KNTC1, Length 624 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-215ENST00000546125 NPAS4Q8IUM7 802 aa4.3□□□□□ -1.72
KNTC1-215ENST00000546125 ATXN3LQ9H3M9 355 aa4.3□□□□□ -1.72
KNTC1-215ENST00000546125 SEMA6CQ9H3T2 930 aa4.3□□□□□ -1.72
KNTC1-215ENST00000546125 GSX1Q9H4S2 264 aaPredicted RBP4.3□□□□□ -1.72
KNTC1-215ENST00000546125 SSU72Q9NP77 194 aaKnown RBP4.3□□□□□ -1.72
KNTC1-215ENST00000546125 FAM170BA6NMN3 283 aa4.29□□□□□ -1.72
KNTC1-215ENST00000546125 CELA3AP09093 270 aa4.29□□□□□ -1.72
KNTC1-215ENST00000546125 HCLS1P14317 486 aaPredicted RBP4.29□□□□□ -1.72
KNTC1-215ENST00000546125 HOXA10P31260 410 aaPredicted RBP4.29□□□□□ -1.72
KNTC1-215ENST00000546125 TAGLNQ01995 201 aaKnown RBP4.29□□□□□ -1.72
KNTC1-215ENST00000546125 ZNF252P-AS1Q0IIN9 211 aa4.29□□□□□ -1.72
KNTC1-215ENST00000546125 PSMD2Q13200 908 aa4.29□□□□□ -1.72
KNTC1-215ENST00000546125 TTLL4Q14679 1199 aa4.29□□□□□ -1.72
KNTC1-215ENST00000546125 LRRC14Q15048 493 aa4.29□□□□□ -1.72
KNTC1-215ENST00000546125 RASIP1Q5U651 963 aa4.29□□□□□ -1.72
KNTC1-215ENST00000546125 DUSP27Q5VZP5 1158 aa4.29□□□□□ -1.72
KNTC1-215ENST00000546125 PCNX4Q63HM2 1172 aa4.29□□□□□ -1.72
KNTC1-215ENST00000546125 LLGL2Q6P1M3 1020 aa4.29□□□□□ -1.72
KNTC1-215ENST00000546125 INTS5Q6P9B9 1019 aaKnown RBP4.29□□□□□ -1.72
KNTC1-215ENST00000546125 SV2BQ7L1I2 683 aa4.29□□□□□ -1.72
KNTC1-215ENST00000546125 ZAR1Q86SH2 424 aa4.29□□□□□ -1.72
KNTC1-215ENST00000546125 SMYD4Q8IYR2 804 aaPredicted RBP4.29□□□□□ -1.72
KNTC1-215ENST00000546125 FAM161BQ96MY7 647 aa4.29□□□□□ -1.72
KNTC1-215ENST00000546125 GOLGA2P5Q9HBQ8 144 aa4.29□□□□□ -1.72
KNTC1-215ENST00000546125 PICK1Q9NRD5 415 aa4.29□□□□□ -1.72
KNTC1-215ENST00000546125 PIM2Q9P1W9 311 aa4.29□□□□□ -1.72
KNTC1-215ENST00000546125 DCDC2CA8MYV0 355 aa4.28□□□□□ -1.72
KNTC1-215ENST00000546125 CD97P48960 835 aa4.28□□□□□ -1.72
KNTC1-215ENST00000546125 CCDC85BQ15834 202 aaPredicted RBP4.28□□□□□ -1.72
KNTC1-215ENST00000546125 MAP3K11Q16584 847 aa4.28□□□□□ -1.72
KNTC1-215ENST00000546125 ZC3H12AQ5D1E8 599 aaKnown RBP4.28□□□□□ -1.72
KNTC1-215ENST00000546125 SEZ6L2Q6UXD5 910 aa4.28□□□□□ -1.72
KNTC1-215ENST00000546125 C12orf40Q86WS4 652 aa4.28□□□□□ -1.72
KNTC1-215ENST00000546125 PHF6Q8IWS0 365 aaKnown RBP eCLIP4.28□□□□□ -1.72
KNTC1-215ENST00000546125 GATA6Q92908 595 aa4.28□□□□□ -1.72
KNTC1-215ENST00000546125 LRRC4CQ9HCJ2 640 aa4.28□□□□□ -1.72
KNTC1-215ENST00000546125 C1GALT1Q9NS00 363 aa4.28□□□□□ -1.72
KNTC1-215ENST00000546125 PCOLCE2Q9UKZ9 415 aa4.28□□□□□ -1.72
KNTC1-215ENST00000546125 PCDHA4Q9UN74 947 aa4.28□□□□□ -1.72
KNTC1-215ENST00000546125 CYP8B1Q9UNU6 501 aa4.28□□□□□ -1.72
KNTC1-215ENST00000546125 PCDHGC5Q9Y5F6 944 aa4.28□□□□□ -1.72
KNTC1-215ENST00000546125 CYP26A1O43174 497 aa4.27□□□□□ -1.73
KNTC1-215ENST00000546125 TRIM37O94972 964 aa4.27□□□□□ -1.73
KNTC1-215ENST00000546125 CDK5R2Q13319 367 aa4.27□□□□□ -1.73
KNTC1-215ENST00000546125 PPM1JQ5JR12 505 aa4.27□□□□□ -1.73
KNTC1-215ENST00000546125 OGFOD3Q6PK18 319 aa4.27□□□□□ -1.73
KNTC1-215ENST00000546125 ZNF765Q7L2R6 523 aa4.27□□□□□ -1.73
KNTC1-215ENST00000546125 ANKRD24Q8TF21 1146 aa4.27□□□□□ -1.73
KNTC1-215ENST00000546125 METTL22Q9BUU2 404 aaPredicted RBP4.27□□□□□ -1.73
KNTC1-215ENST00000546125 RB1CC1Q8TDY2 1594 aa4.27□□□□□ -1.73
KNTC1-215ENST00000546125 ZBTB7CA1YPR0 619 aa4.26□□□□□ -1.73
KNTC1-215ENST00000546125 NEFMP07197 916 aa4.26□□□□□ -1.73
KNTC1-215ENST00000546125 FOSL1P15407 271 aa4.26□□□□□ -1.73
KNTC1-215ENST00000546125 LMNB1P20700 586 aa4.26□□□□□ -1.73
KNTC1-215ENST00000546125 ERVK-24P63145 666 aa4.26□□□□□ -1.73
KNTC1-215ENST00000546125 DAB2P98082 770 aa4.26□□□□□ -1.73
KNTC1-215ENST00000546125 CYP27A1Q02318 531 aa4.26□□□□□ -1.73
KNTC1-215ENST00000546125 PTPN11Q06124 597 aaPredicted RBP4.26□□□□□ -1.73
KNTC1-215ENST00000546125 MEI1Q5TIA1 1274 aa4.26□□□□□ -1.73
KNTC1-215ENST00000546125 TTBK2Q6IQ55 1244 aa4.26□□□□□ -1.73
KNTC1-215ENST00000546125 FBXO33Q7Z6M2 555 aa4.26□□□□□ -1.73
KNTC1-215ENST00000546125 RNF214Q8ND24 703 aa4.26□□□□□ -1.73
KNTC1-215ENST00000546125 ISL2Q96A47 359 aa4.26□□□□□ -1.73
KNTC1-215ENST00000546125 ELMO3Q96BJ8 720 aa4.26□□□□□ -1.73
KNTC1-215ENST00000546125 CACNA2D2Q9NY47 1150 aa4.26□□□□□ -1.73
KNTC1-215ENST00000546125 KIAA1324LA8MWY0 1029 aaPredicted RBP4.25□□□□□ -1.73
KNTC1-215ENST00000546125 ADAMTS4O75173 837 aa4.25□□□□□ -1.73
KNTC1-215ENST00000546125 FAM87AP0C7U9 286 aa4.25□□□□□ -1.73
KNTC1-215ENST00000546125 ERCC3P19447 782 aa4.25□□□□□ -1.73
KNTC1-215ENST00000546125 INPP5AQ14642 412 aa4.25□□□□□ -1.73
KNTC1-215ENST00000546125 TAF1CQ15572 869 aaPredicted RBP4.25□□□□□ -1.73
KNTC1-215ENST00000546125 CYP27C1Q4G0S4 372 aa4.25□□□□□ -1.73
KNTC1-215ENST00000546125 CDC37L1Q7L3B6 337 aa4.25□□□□□ -1.73
KNTC1-215ENST00000546125 TMC4Q7Z404 712 aa4.25□□□□□ -1.73
KNTC1-215ENST00000546125 MRS2Q9HD23 443 aa4.25□□□□□ -1.73
KNTC1-215ENST00000546125 VTI1BQ9UEU0 232 aa4.25□□□□□ -1.73
KNTC1-215ENST00000546125 PCDHB5Q9Y5E4 795 aa4.25□□□□□ -1.73
KNTC1-215ENST00000546125 SORBS3O60504 671 aa4.24□□□□□ -1.73
KNTC1-215ENST00000546125 LEFTY1O75610 366 aa4.24□□□□□ -1.73
KNTC1-215ENST00000546125 WNT11O96014 354 aa4.24□□□□□ -1.73
KNTC1-215ENST00000546125 CTSHP09668 335 aa4.24□□□□□ -1.73
KNTC1-215ENST00000546125 CDK8P49336 464 aa4.24□□□□□ -1.73
KNTC1-215ENST00000546125 CPSF6Q16630 551 aaKnown RBP eCLIP4.24□□□□□ -1.73
KNTC1-215ENST00000546125 LRFN4Q6PJG9 635 aa4.24□□□□□ -1.73
KNTC1-215ENST00000546125 PDZRN4Q6ZMN7 1036 aaPredicted RBP4.24□□□□□ -1.73
KNTC1-215ENST00000546125 HDXQ7Z353 690 aa4.24□□□□□ -1.73
KNTC1-215ENST00000546125 UBE3DQ7Z6J8 389 aa4.24□□□□□ -1.73
KNTC1-215ENST00000546125 DTX1Q86Y01 620 aa4.24□□□□□ -1.73
KNTC1-215ENST00000546125 HOMEZQ8IX15 550 aa4.24□□□□□ -1.73
KNTC1-215ENST00000546125 JARID2Q92833 1246 aaPredicted RBP4.24□□□□□ -1.73
KNTC1-215ENST00000546125 BCL2L13Q9BXK5 485 aa4.24□□□□□ -1.73
KNTC1-215ENST00000546125 KRTAP4-7Q9BYR0 210 aa4.24□□□□□ -1.73
KNTC1-215ENST00000546125 ZC3H7BQ9UGR2 993 aaKnown RBP4.24□□□□□ -1.73
KNTC1-215ENST00000546125 LMTK3Q96Q04 1460 aa4.24□□□□□ -1.73
KNTC1-215ENST00000546125 PRAMEF27A3QJZ7 478 aa4.23□□□□□ -1.73
KNTC1-215ENST00000546125 FANCGO15287 622 aa4.23□□□□□ -1.73
KNTC1-215ENST00000546125 SPINK2P20155 84 aa4.23□□□□□ -1.73
KNTC1-215ENST00000546125 LIG3P49916 1009 aa4.23□□□□□ -1.73
KNTC1-215ENST00000546125 GP2P55259 537 aaKnown RBP4.23□□□□□ -1.73
KNTC1-215ENST00000546125 RPS26P62854 115 aaKnown RBP4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms