RNA–Protein interactions for RNA: ENST00000545425.2

FOXA1-202, Transcript of forkhead box A1, humanhuman

TSL 2

Gene FOXA1, Length 1,806 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-202ENST00000545425 COL23A1Q86Y22 540 aaPredicted RBP26.91■■□□□ 1.9
FOXA1-202ENST00000545425 CACTINQ8WUQ7 758 aaKnown RBP26.91■■□□□ 1.9
FOXA1-202ENST00000545425 STRBPQ96SI9 672 aaKnown RBP26.91■■□□□ 1.9
FOXA1-202ENST00000545425 KRT23Q9C075 422 aa26.91■■□□□ 1.9
FOXA1-202ENST00000545425 ZNF532Q9HCE3 1301 aa26.91■■□□□ 1.9
FOXA1-202ENST00000545425 TUBB4AP04350 444 aa26.9■■□□□ 1.9
FOXA1-202ENST00000545425 KCNJ6P48051 423 aa26.9■■□□□ 1.9
FOXA1-202ENST00000545425 ITPK1Q13572 414 aa26.9■■□□□ 1.9
FOXA1-202ENST00000545425 TRIM29Q14134 588 aa26.9■■□□□ 1.9
FOXA1-202ENST00000545425 APOA5Q6Q788 366 aa26.9■■□□□ 1.9
FOXA1-202ENST00000545425 AIDAQ96BJ3 306 aa26.9■■□□□ 1.9
FOXA1-202ENST00000545425 ALG1Q9BT22 464 aa26.9■■□□□ 1.9
FOXA1-202ENST00000545425 PIH1D3Q9NQM4 214 aaKnown RBP26.9■■□□□ 1.9
FOXA1-202ENST00000545425 GPHNQ9NQX3 736 aaPredicted RBP26.9■■□□□ 1.9
FOXA1-202ENST00000545425 QSER1Q2KHR3 1735 aa26.9■■□□□ 1.9
FOXA1-202ENST00000545425 IKBKBO14920 756 aa26.9■■□□□ 1.9
FOXA1-202ENST00000545425 ZBTB43O43298 467 aa26.9■■□□□ 1.9
FOXA1-202ENST00000545425 NRDCO43847 1150 aa26.9■■□□□ 1.9
FOXA1-202ENST00000545425 AXDND1Q5T1B0 1012 aaPredicted RBP26.9■■□□□ 1.9
FOXA1-202ENST00000545425 LINC00116Q8NCU8 138 aa26.9■■□□□ 1.9
FOXA1-202ENST00000545425 NBPF3Q9H094 633 aa26.9■■□□□ 1.9
FOXA1-202ENST00000545425 NRBP1Q9UHY1 535 aa26.9■■□□□ 1.9
FOXA1-202ENST00000545425 CICQ96RK0 1608 aaPredicted RBP26.89■■□□□ 1.9
FOXA1-202ENST00000545425 CCDC150Q8NCX0 1101 aa26.89■■□□□ 1.9
FOXA1-202ENST00000545425 CCDC94Q9BW85 323 aaPredicted RBP26.89■■□□□ 1.9
FOXA1-202ENST00000545425 RIOK3O14730 519 aaKnown RBP26.88■■□□□ 1.89
FOXA1-202ENST00000545425 IDH1O75874 414 aaKnown RBP26.88■■□□□ 1.89
FOXA1-202ENST00000545425 ZNF202O95125 648 aa26.88■■□□□ 1.89
FOXA1-202ENST00000545425 GPTP24298 496 aa26.88■■□□□ 1.89
FOXA1-202ENST00000545425 POLD1P28340 1107 aa26.88■■□□□ 1.89
FOXA1-202ENST00000545425 TBC1D10CQ8IV04 446 aa26.88■■□□□ 1.89
FOXA1-202ENST00000545425 EIF4ENIF1Q9NRA8 985 aaKnown RBP26.88■■□□□ 1.89
FOXA1-202ENST00000545425 A0A1B0GVL5 298 aa26.88■■□□□ 1.89
FOXA1-202ENST00000545425 U2AF2P26368 475 aaKnown RBP eCLIP26.88■■□□□ 1.89
FOXA1-202ENST00000545425 LRMPQ12912 555 aa26.88■■□□□ 1.89
FOXA1-202ENST00000545425 PARP10Q53GL7 1025 aa26.88■■□□□ 1.89
FOXA1-202ENST00000545425 DZIP3Q86Y13 1208 aaKnown RBP26.88■■□□□ 1.89
FOXA1-202ENST00000545425 TMTC2Q8N394 836 aa26.88■■□□□ 1.89
FOXA1-202ENST00000545425 AOPEPQ8N6M6 819 aa26.88■■□□□ 1.89
FOXA1-202ENST00000545425 CCDC85AQ96PX6 553 aaPredicted RBP26.88■■□□□ 1.89
FOXA1-202ENST00000545425 APPP05067 770 aa26.87■■□□□ 1.89
FOXA1-202ENST00000545425 POLR3DP05423 398 aaPredicted RBP26.87■■□□□ 1.89
FOXA1-202ENST00000545425 PI16Q6UXB8 463 aa26.87■■□□□ 1.89
FOXA1-202ENST00000545425 IGDCC4Q8TDY8 1250 aa26.87■■□□□ 1.89
FOXA1-202ENST00000545425 NACAP1Q9BZK3 213 aa26.87■■□□□ 1.89
FOXA1-202ENST00000545425 TNNT1P13805 278 aa26.86■■□□□ 1.89
FOXA1-202ENST00000545425 IARSP41252 1262 aaKnown RBP26.86■■□□□ 1.89
FOXA1-202ENST00000545425 TPD52L1Q16890 204 aaPredicted RBP26.86■■□□□ 1.89
FOXA1-202ENST00000545425 CCDC144BQ3MJ40 725 aa26.86■■□□□ 1.89
FOXA1-202ENST00000545425 CCDC144CPQ8IYA2 1237 aa26.86■■□□□ 1.89
FOXA1-202ENST00000545425 SPATA5Q8NB90 893 aa26.86■■□□□ 1.89
FOXA1-202ENST00000545425 SLC4A9Q96Q91 983 aa26.86■■□□□ 1.89
FOXA1-202ENST00000545425 HPSEQ9Y251 543 aa26.86■■□□□ 1.89
FOXA1-202ENST00000545425 CUTAO60888 179 aa26.86■■□□□ 1.89
FOXA1-202ENST00000545425 PHKA1P46020 1223 aa26.86■■□□□ 1.89
FOXA1-202ENST00000545425 SART3Q15020 963 aaKnown RBP26.86■■□□□ 1.89
FOXA1-202ENST00000545425 KRT40Q6A162 431 aa26.86■■□□□ 1.89
FOXA1-202ENST00000545425 CYB5R4Q7L1T6 521 aa26.86■■□□□ 1.89
FOXA1-202ENST00000545425 ANKRD7Q92527 254 aa26.86■■□□□ 1.89
FOXA1-202ENST00000545425 TUBE1Q9UJT0 475 aa26.86■■□□□ 1.89
FOXA1-202ENST00000545425 ZBTB1Q9Y2K1 713 aa26.86■■□□□ 1.89
FOXA1-202ENST00000545425 NEDD4P46934 1319 aa26.85■■□□□ 1.89
FOXA1-202ENST00000545425 PFKFB1P16118 471 aa26.85■■□□□ 1.89
FOXA1-202ENST00000545425 PPP2R5BQ15173 497 aa26.85■■□□□ 1.89
FOXA1-202ENST00000545425 VPS37DQ86XT2 251 aa26.85■■□□□ 1.89
FOXA1-202ENST00000545425 NAPBQ9H115 298 aa26.85■■□□□ 1.89
FOXA1-202ENST00000545425 BCL2L12Q9HB09 334 aa26.85■■□□□ 1.89
FOXA1-202ENST00000545425 LY9Q9HBG7 655 aa26.85■■□□□ 1.89
FOXA1-202ENST00000545425 HOOK1Q9UJC3 728 aaKnown RBP26.85■■□□□ 1.89
FOXA1-202ENST00000545425 LAMB2P55268 1798 aa26.85■■□□□ 1.89
FOXA1-202ENST00000545425 TAF1LQ8IZX4 1826 aa26.84■■□□□ 1.89
FOXA1-202ENST00000545425 GOLGA8AA7E2F4 631 aa26.84■■□□□ 1.89
FOXA1-202ENST00000545425 GNL2Q13823 731 aaKnown RBP26.84■■□□□ 1.89
FOXA1-202ENST00000545425 RC3H1Q5TC82 1133 aaKnown RBP26.84■■□□□ 1.89
FOXA1-202ENST00000545425 RNF41Q9H4P4 317 aaPredicted RBP26.84■■□□□ 1.89
FOXA1-202ENST00000545425 MORC2Q9Y6X9 1032 aaPredicted RBP26.84■■□□□ 1.89
FOXA1-202ENST00000545425 CHD4Q14839 1912 aa26.84■■□□□ 1.89
FOXA1-202ENST00000545425 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.83■■□□□ 1.89
FOXA1-202ENST00000545425 CCDC196A0A1B0GTZ2 297 aa26.83■■□□□ 1.89
FOXA1-202ENST00000545425 KIF28PB7ZC32 967 aa26.83■■□□□ 1.89
FOXA1-202ENST00000545425 SKILP12757 684 aa26.83■■□□□ 1.89
FOXA1-202ENST00000545425 SYKP43405 635 aa26.83■■□□□ 1.89
FOXA1-202ENST00000545425 NTRK3Q16288 839 aa26.83■■□□□ 1.89
FOXA1-202ENST00000545425 TMEM67Q5HYA8 995 aa26.83■■□□□ 1.89
FOXA1-202ENST00000545425 OTUD7BQ6GQQ9 843 aa26.83■■□□□ 1.89
FOXA1-202ENST00000545425 CCDC69A6NI79 296 aa26.83■■□□□ 1.89
FOXA1-202ENST00000545425 GNPATO15228 680 aa26.83■■□□□ 1.89
FOXA1-202ENST00000545425 IFNAR1P17181 557 aa26.83■■□□□ 1.89
FOXA1-202ENST00000545425 SSRP1Q08945 709 aaKnown RBP26.83■■□□□ 1.89
FOXA1-202ENST00000545425 AKNAD1Q5T1N1 836 aa26.83■■□□□ 1.89
FOXA1-202ENST00000545425 NFXL1Q6ZNB6 911 aa26.83■■□□□ 1.89
FOXA1-202ENST00000545425 IFNL3Q8IZI9 196 aa26.83■■□□□ 1.89
FOXA1-202ENST00000545425 ZNF710Q8N1W2 664 aa26.83■■□□□ 1.89
FOXA1-202ENST00000545425 SLC12A7Q9Y666 1083 aa26.83■■□□□ 1.89
FOXA1-202ENST00000545425 CBFA2T2O43439 604 aa26.82■■□□□ 1.88
FOXA1-202ENST00000545425 FMNL1O95466 1100 aaPredicted RBP26.82■■□□□ 1.88
FOXA1-202ENST00000545425 PTPAQ15257 358 aa26.82■■□□□ 1.88
FOXA1-202ENST00000545425 SAFBQ15424 915 aaKnown RBP eCLIP26.82■■□□□ 1.88
FOXA1-202ENST00000545425 CCDC112Q8NEF3 446 aa26.82■■□□□ 1.88
FOXA1-202ENST00000545425 STAG1Q8WVM7 1258 aa26.82■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms