RNA–Protein interactions for RNA: ENST00000543658.5

DDB1-223, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-223ENST00000543658 FLT1P17948 1338 aa14.17□□□□□ -0.14
DDB1-223ENST00000543658 GSG1L2A8MUP6 293 aa14.17□□□□□ -0.14
DDB1-223ENST00000543658 TCP10L2B9ZVM9 353 aa14.17□□□□□ -0.14
DDB1-223ENST00000543658 POLR3DP05423 398 aaPredicted RBP14.17□□□□□ -0.14
DDB1-223ENST00000543658 HLA-DOAP06340 250 aa14.17□□□□□ -0.14
DDB1-223ENST00000543658 CACNB3P54284 484 aa14.17□□□□□ -0.14
DDB1-223ENST00000543658 PTH1RQ03431 593 aa14.17□□□□□ -0.14
DDB1-223ENST00000543658 IMMTQ16891 758 aaKnown RBP14.17□□□□□ -0.14
DDB1-223ENST00000543658 IDI2Q9BXS1 227 aa14.17□□□□□ -0.14
DDB1-223ENST00000543658 GGA3Q9NZ52 723 aa14.17□□□□□ -0.14
DDB1-223ENST00000543658 RBM8AQ9Y5S9 174 aaKnown RBP14.17□□□□□ -0.14
DDB1-223ENST00000543658 ENTPD3O75355 529 aa14.16□□□□□ -0.14
DDB1-223ENST00000543658 EGFRP00533 1210 aa14.16□□□□□ -0.14
DDB1-223ENST00000543658 SLC3A2P08195 630 aaKnown RBP14.16□□□□□ -0.14
DDB1-223ENST00000543658 VEGFAP15692 232 aaPredicted RBP14.16□□□□□ -0.14
DDB1-223ENST00000543658 ZKSCAN1P17029 563 aaPredicted RBP14.16□□□□□ -0.14
DDB1-223ENST00000543658 TCP10Q12799 353 aa14.16□□□□□ -0.14
DDB1-223ENST00000543658 FKBP1CQ5VVH2 108 aa14.16□□□□□ -0.14
DDB1-223ENST00000543658 MAP4K1Q92918 833 aa14.16□□□□□ -0.14
DDB1-223ENST00000543658 DCPSQ96C86 337 aaKnown RBP14.16□□□□□ -0.14
DDB1-223ENST00000543658 ZBED3Q96IU2 234 aaPredicted RBP14.16□□□□□ -0.14
DDB1-223ENST00000543658 TRIM34Q9BYJ4 488 aa14.16□□□□□ -0.14
DDB1-223ENST00000543658 OSBPL5Q9H0X9 879 aaPredicted RBP14.16□□□□□ -0.14
DDB1-223ENST00000543658 TAF1DQ9H5J8 278 aaPredicted RBP14.16□□□□□ -0.14
DDB1-223ENST00000543658 RRAGCQ9HB90 399 aa14.16□□□□□ -0.14
DDB1-223ENST00000543658 DCP1AQ9NPI6 582 aaPredicted RBP14.16□□□□□ -0.14
DDB1-223ENST00000543658 COL2A1P02458 1487 aaPredicted RBP14.15□□□□□ -0.14
DDB1-223ENST00000543658 MINDY4BA8MYZ0 360 aa14.15□□□□□ -0.14
DDB1-223ENST00000543658 ZNF213O14771 459 aa14.15□□□□□ -0.14
DDB1-223ENST00000543658 NPM3O75607 178 aaKnown RBP14.15□□□□□ -0.14
DDB1-223ENST00000543658 WDHD1O75717 1129 aaPredicted RBP14.15□□□□□ -0.14
DDB1-223ENST00000543658 SEC24BO95487 1268 aa14.15□□□□□ -0.14
DDB1-223ENST00000543658 ALX1Q15699 326 aa14.15□□□□□ -0.14
DDB1-223ENST00000543658 ANGEL2Q5VTE6 544 aaKnown RBP14.15□□□□□ -0.14
DDB1-223ENST00000543658 TTC6Q86TZ1 520 aa14.15□□□□□ -0.14
DDB1-223ENST00000543658 EPB41L4AQ9HCS5 686 aaPredicted RBP14.15□□□□□ -0.14
DDB1-223ENST00000543658 SAP30BPQ9UHR5 308 aaKnown RBP14.15□□□□□ -0.14
DDB1-223ENST00000543658 CLEC11AQ9Y240 323 aa14.15□□□□□ -0.14
DDB1-223ENST00000543658 UTRNP46939 3433 aa14.15□□□□□ -0.14
DDB1-223ENST00000543658 PITPNM2Q9BZ72 1349 aa14.15□□□□□ -0.15
DDB1-223ENST00000543658 FGAP02671 866 aa14.14□□□□□ -0.15
DDB1-223ENST00000543658 NFIAQ12857 509 aa14.14□□□□□ -0.15
DDB1-223ENST00000543658 FAM83AQ86UY5 434 aa14.14□□□□□ -0.15
DDB1-223ENST00000543658 SULF1Q8IWU6 871 aa14.14□□□□□ -0.15
DDB1-223ENST00000543658 USP26Q9BXU7 913 aa14.14□□□□□ -0.15
DDB1-223ENST00000543658 DHX36Q9H2U1 1008 aaKnown RBP14.14□□□□□ -0.15
DDB1-223ENST00000543658 DDX4Q9NQI0 724 aaKnown RBP14.14□□□□□ -0.15
DDB1-223ENST00000543658 SIPA1L1O43166 1804 aa14.13□□□□□ -0.15
DDB1-223ENST00000543658 USP17L12C9JPN9 530 aa14.13□□□□□ -0.15
DDB1-223ENST00000543658 USP17L21D6R901 530 aa14.13□□□□□ -0.15
DDB1-223ENST00000543658 HAND2P61296 217 aa14.13□□□□□ -0.15
DDB1-223ENST00000543658 PPARAQ07869 468 aa14.13□□□□□ -0.15
DDB1-223ENST00000543658 SLC4A8Q2Y0W8 1093 aa14.13□□□□□ -0.15
DDB1-223ENST00000543658 CRACR2BQ8N4Y2 399 aaPredicted RBP14.13□□□□□ -0.15
DDB1-223ENST00000543658 ZC3H15Q8WU90 426 aaKnown RBP14.13□□□□□ -0.15
DDB1-223ENST00000543658 FAM151AQ8WW52 585 aa14.13□□□□□ -0.15
DDB1-223ENST00000543658 C22orf23Q9BZE7 217 aa14.13□□□□□ -0.15
DDB1-223ENST00000543658 ZNF287Q9HBT7 754 aa14.13□□□□□ -0.15
DDB1-223ENST00000543658 GPBP1L1Q9HC44 474 aaPredicted RBP14.13□□□□□ -0.15
DDB1-223ENST00000543658 FAM198AQ9UFP1 575 aa14.13□□□□□ -0.15
DDB1-223ENST00000543658 PPP2R3BQ9Y5P8 575 aa14.13□□□□□ -0.15
DDB1-223ENST00000543658 ATAD5Q96QE3 1844 aa14.13□□□□□ -0.15
DDB1-223ENST00000543658 FOXP2O15409 715 aa14.12□□□□□ -0.15
DDB1-223ENST00000543658 HSPA4P34932 840 aa14.12□□□□□ -0.15
DDB1-223ENST00000543658 HIRAP54198 1017 aaPredicted RBP14.12□□□□□ -0.15
DDB1-223ENST00000543658 TRDNQ13061 729 aa14.12□□□□□ -0.15
DDB1-223ENST00000543658 KRT32Q14532 448 aa14.12□□□□□ -0.15
DDB1-223ENST00000543658 SBK1Q52WX2 424 aa14.12□□□□□ -0.15
DDB1-223ENST00000543658 CREB3L3Q68CJ9 461 aa14.12□□□□□ -0.15
DDB1-223ENST00000543658 CTR9Q6PD62 1173 aa14.12□□□□□ -0.15
DDB1-223ENST00000543658 HOOK2Q96ED9 719 aa14.12□□□□□ -0.15
DDB1-223ENST00000543658 RNF41Q9H4P4 317 aaPredicted RBP14.12□□□□□ -0.15
DDB1-223ENST00000543658 NMRK2Q9NPI5 230 aa14.12□□□□□ -0.15
DDB1-223ENST00000543658 TOMM22Q9NS69 142 aa14.12□□□□□ -0.15
DDB1-223ENST00000543658 PALD1Q9ULE6 856 aa14.12□□□□□ -0.15
DDB1-223ENST00000543658 ASTN2O75129 1339 aaPredicted RBP14.12□□□□□ -0.15
DDB1-223ENST00000543658 SLC27A2O14975 620 aa14.11□□□□□ -0.15
DDB1-223ENST00000543658 PDE4BQ07343 736 aa14.11□□□□□ -0.15
DDB1-223ENST00000543658 RASA3Q14644 834 aa14.11□□□□□ -0.15
DDB1-223ENST00000543658 TRPM7Q96QT4 1865 aa14.11□□□□□ -0.15
DDB1-223ENST00000543658 CSRNP1Q96S65 589 aa14.11□□□□□ -0.15
DDB1-223ENST00000543658 DEFB129Q9H1M3 183 aa14.11□□□□□ -0.15
DDB1-223ENST00000543658 MKRN1Q9UHC7 482 aaKnown RBP14.11□□□□□ -0.15
DDB1-223ENST00000543658 CNTNAP1P78357 1384 aa14.1□□□□□ -0.15
DDB1-223ENST00000543658 ATRNL1Q5VV63 1379 aa14.1□□□□□ -0.15
DDB1-223ENST00000543658 POTECB2RU33 542 aa14.1□□□□□ -0.15
DDB1-223ENST00000543658 CYP21A2P08686 494 aa14.1□□□□□ -0.15
DDB1-223ENST00000543658 YY1P25490 414 aa14.1□□□□□ -0.15
DDB1-223ENST00000543658 NF2P35240 595 aa14.1□□□□□ -0.15
DDB1-223ENST00000543658 CTDSPL2Q05D32 466 aa14.1□□□□□ -0.15
DDB1-223ENST00000543658 NECTIN1Q15223 517 aa14.1□□□□□ -0.15
DDB1-223ENST00000543658 C12orf60Q5U649 245 aa14.1□□□□□ -0.15
DDB1-223ENST00000543658 MFSD6Q6ZSS7 791 aa14.1□□□□□ -0.15
DDB1-223ENST00000543658 KRT26Q7Z3Y9 468 aa14.1□□□□□ -0.15
DDB1-223ENST00000543658 RALYLQ86SE5 291 aaKnown RBP14.1□□□□□ -0.15
DDB1-223ENST00000543658 LDHDQ86WU2 507 aa14.1□□□□□ -0.15
DDB1-223ENST00000543658 STK11IPQ8N1F8 1099 aa14.1□□□□□ -0.15
DDB1-223ENST00000543658 TMEM39BQ9GZU3 492 aa14.1□□□□□ -0.15
DDB1-223ENST00000543658 CNNM2Q9H8M5 875 aa14.1□□□□□ -0.15
DDB1-223ENST00000543658 PI4KBQ9UBF8 816 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 95.5 ms